Basic Information

Insect: Microdon myrmicae
Gene Symbol: -
Assembly: GCA_963931805.1
Location: OZ007501.1:139877754-139879579[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 9.3e-07 0.00011 23.3 1.5 2 23 169 190 169 190 0.98

2 12 5.1e-06 0.00058 21.0 2.4 1 23 197 219 197 219 0.98

3 12 3e-05 0.0034 18.6 1.4 1 23 237 259 237 259 0.98

4 12 4.8e-06 0.00055 21.1 1.1 1 23 269 291 269 291 0.98

5 12 3.6e-05 0.0041 18.3 0.1 2 23 298 319 297 319 0.97

6 12 0.0044 0.51 11.7 6.1 1 23 325 347 325 347 0.97

7 12 1.1e-07 1.2e-05 26.3 0.6 1 23 353 375 353 375 0.95

8 12 0.00026 0.03 15.6 1.4 1 23 381 403 381 403 0.99

9 12 8.5e-05 0.0098 17.1 0.5 1 23 409 431 409 431 0.93

10 12 0.0015 0.17 13.2 8.2 1 23 437 459 437 459 0.99

11 12 6.2e-06 0.00071 20.7 0.9 1 23 465 487 465 487 0.98

12 12 0.00015 0.017 16.4 1.0 1 23 493 515 493 515 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	9.3e-07	0.00011	23.3	1.5	2	23	169	190	169	190	0.98
2	12	5.1e-06	0.00058	21.0	2.4	1	23	197	219	197	219	0.98
3	12	3e-05	0.0034	18.6	1.4	1	23	237	259	237	259	0.98
4	12	4.8e-06	0.00055	21.1	1.1	1	23	269	291	269	291	0.98
5	12	3.6e-05	0.0041	18.3	0.1	2	23	298	319	297	319	0.97
6	12	0.0044	0.51	11.7	6.1	1	23	325	347	325	347	0.97
7	12	1.1e-07	1.2e-05	26.3	0.6	1	23	353	375	353	375	0.95
8	12	0.00026	0.03	15.6	1.4	1	23	381	403	381	403	0.99
9	12	8.5e-05	0.0098	17.1	0.5	1	23	409	431	409	431	0.93
10	12	0.0015	0.17	13.2	8.2	1	23	437	459	437	459	0.99
11	12	6.2e-06	0.00071	20.7	0.9	1	23	465	487	465	487	0.98
12	12	0.00015	0.017	16.4	1.0	1	23	493	515	493	515	0.96

Sequence Information

Coding Sequence: ATGTCTATTGAAAAAGAACAGATTACCATGTCTGATGCACTAGCTTCCGTCACGAGACTAAACATTAAACGAGATGATCACCTTCCGGAAAACATTTGTTCCAATTGCGTTGTTTCCTTAGCAGCAGCGTATGCATTTCAAAAGATGTGTATTATTTCGGATTTCACTATCCGAACAACTTTGAAACAAGCTAAAGTTGAAAAAGAAGAACCATTGCCCAACGATTTGCTATCCATCGAACAAAGCGGAATTCTTTTATGCGAGAACATTTGTTTAAAAACTGAAGGTGGTGTGGGTACGGGGGATTACGAGGTAAACGTATATAGTGGAATAAATGGCACAGGAAACCAAGAAAACCCAGAGGAGAAATTTTCCATGGAGGAAGACATGGGCAACATCATCCATGACGAGGATCCAGGAGTAAATGACTCTTCCTCCGTCGACGAATTGAATACCAATGAACTTGAAAGGCCAAATCCCCGTAATCGACGGAAACTTTGCCGCAAATGTGAAGTTTGTGGTAAGTCCTTTGATCGAATGCATGGCTTGAACCGTCATATGAACGTTCACAAAGTCGAAGGCCGTCCATATGAATGCACCGAGTGTAAACGACGCTTCACAAAAGAAGCACATCTACAGCGCCATGCAATAACTCACGAGAAAATATTCCAAAGCACAGCCAACCAACAAAAACTCAGCACAGACGGCCACAAATGTCCTGAGTGTCCAAGAAGATTCCTTAAACAAGAATCGTTAGCGTCACACATGAGATCTCATCGCAGGAACTCAAATGCTACAAAGCATTACCAGTGTGACATATGTTTAAAAGTCTTCGAAAGGTTAAGCAGATTAACTAGACATCAAAAACTGCATGAAGAGCATCGTAAACTTAGCTGTGATATTTGTGGAAAAACCTTTGGCCTGAGTGCCCTTTTAATAGACCACATAAATAAGCACAATGGTATTAAGCCTCACATGTGTAACTTCTGCAACAAGTCTTTTCTTCAAGCTTGCACCTTGAAGGATCACTTGCGTACGCATACCGGAGAGCAGCCTTTTCTTTGTTCGGAATGTGGAAAAGCATTCAACAATGCAAGTAACCTGCGTCAACATCAACTACGACACACGGGTATTAAACGCTACCAATGTCCAGAGTGCCCCAGTAAGTTCCCATGCAAAAGTGATTTATCCTCGCATATGAGTACGCATGGCAATGAAAAGCCATATGCCTGCGAaatctgtggatccagattcaccaAACCGTATTCGTTAAAAAAACACGATCGAATACATACAGGAGAAAAGCCCTACAAATGCGACTACTGTGACATGAGATTTAACTGTTCAGATCATATGAAGCGCCACAGGCGGACACACACGGGCGAAAAACCATATGCGTGTAAATACTGTGAGAAAACTTACGCACAATCAAATGATATGATAAAGCACCTGCGGTCCCATGTCGGGGTGAATGTGTACAAATGTGAAAAGTGCGAGGCCTCATTTAGACTCAGGGCGGAGCTAAAGAAGCACACAACAGAACACTATAAAACTGAACTTGCTCTTAAACACGAAACTAGGCAGAACCCAACCTGA
Protein Sequence: MSIEKEQITMSDALASVTRLNIKRDDHLPENICSNCVVSLAAAYAFQKMCIISDFTIRTTLKQAKVEKEEPLPNDLLSIEQSGILLCENICLKTEGGVGTGDYEVNVYSGINGTGNQENPEEKFSMEEDMGNIIHDEDPGVNDSSSVDELNTNELERPNPRNRRKLCRKCEVCGKSFDRMHGLNRHMNVHKVEGRPYECTECKRRFTKEAHLQRHAITHEKIFQSTANQQKLSTDGHKCPECPRRFLKQESLASHMRSHRRNSNATKHYQCDICLKVFERLSRLTRHQKLHEEHRKLSCDICGKTFGLSALLIDHINKHNGIKPHMCNFCNKSFLQACTLKDHLRTHTGEQPFLCSECGKAFNNASNLRQHQLRHTGIKRYQCPECPSKFPCKSDLSSHMSTHGNEKPYACEICGSRFTKPYSLKKHDRIHTGEKPYKCDYCDMRFNCSDHMKRHRRTHTGEKPYACKYCEKTYAQSNDMIKHLRSHVGVNVYKCEKCEASFRLRAELKKHTTEHYKTELALKHETRQNPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -