Basic Information

Insect: Microdon myrmicae
Gene Symbol: -
Assembly: GCA_963931805.1
Location: OZ007502.1:8569710-8571773[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.2e-07 3.6e-05 24.8 1.3 1 23 10 32 10 32 0.98

2 16 0.00074 0.084 14.2 5.3 1 23 38 60 38 60 0.99

3 16 0.0025 0.29 12.5 3.5 1 23 66 88 66 88 0.99

4 16 4.2e-08 4.9e-06 27.5 1.0 1 23 94 116 94 116 0.98

5 16 1.2e-06 0.00014 22.9 3.6 1 23 122 144 122 144 0.98

6 16 0.42 48 5.5 0.4 3 23 243 260 241 260 0.85

7 16 0.0003 0.035 15.4 0.3 6 23 271 288 269 288 0.95

8 16 0.00036 0.041 15.2 7.3 1 23 294 316 294 316 0.98

9 16 0.00021 0.024 15.9 4.0 1 23 322 344 322 344 0.98

10 16 2.6e-05 0.0029 18.8 1.4 1 23 350 372 350 372 0.95

11 16 2.1e-07 2.4e-05 25.4 0.3 1 23 378 400 378 400 0.98

12 16 7.2e-05 0.0083 17.4 1.4 3 23 532 552 531 552 0.97

13 16 1.9e-06 0.00022 22.3 0.9 1 23 558 580 558 580 0.98

14 16 3.2e-05 0.0037 18.5 2.3 1 23 586 608 586 608 0.99

15 16 4.4e-06 0.0005 21.2 1.2 1 23 614 636 614 636 0.98

16 16 1e-07 1.2e-05 26.3 1.1 1 23 642 664 642 664 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.2e-07	3.6e-05	24.8	1.3	1	23	10	32	10	32	0.98
2	16	0.00074	0.084	14.2	5.3	1	23	38	60	38	60	0.99
3	16	0.0025	0.29	12.5	3.5	1	23	66	88	66	88	0.99
4	16	4.2e-08	4.9e-06	27.5	1.0	1	23	94	116	94	116	0.98
5	16	1.2e-06	0.00014	22.9	3.6	1	23	122	144	122	144	0.98
6	16	0.42	48	5.5	0.4	3	23	243	260	241	260	0.85
7	16	0.0003	0.035	15.4	0.3	6	23	271	288	269	288	0.95
8	16	0.00036	0.041	15.2	7.3	1	23	294	316	294	316	0.98
9	16	0.00021	0.024	15.9	4.0	1	23	322	344	322	344	0.98
10	16	2.6e-05	0.0029	18.8	1.4	1	23	350	372	350	372	0.95
11	16	2.1e-07	2.4e-05	25.4	0.3	1	23	378	400	378	400	0.98
12	16	7.2e-05	0.0083	17.4	1.4	3	23	532	552	531	552	0.97
13	16	1.9e-06	0.00022	22.3	0.9	1	23	558	580	558	580	0.98
14	16	3.2e-05	0.0037	18.5	2.3	1	23	586	608	586	608	0.99
15	16	4.4e-06	0.0005	21.2	1.2	1	23	614	636	614	636	0.98
16	16	1e-07	1.2e-05	26.3	1.1	1	23	642	664	642	664	0.98

Sequence Information

Coding Sequence: ATGAGACACCATAGCAACGAGCGGCCTTTCCGTTGTGATGATTGCGACAAAGCGTATTTCAATTCCAGGGATTTACGGCGTCATATGAAAGTACACACGGGCAAGAAGTCAtatgaatgtcaatactgtgatcgccgttttactGAAAATAGGAGCCGAAAACATCACGAGCGCACCCACACGGGCGAGaagccttacgaatgtcaatactgtgatcaccGTTTTGCTGTAACGAGCAGCCGAAAAACCCATGAGCGTACGCACACCGGTGAAAAGCCGTTCGTATGCCCAACTTGTGGGAAGAGCTTTGCACATTCTGGCAACCTGTCACAACATCTTCGAAGTCATACTGGCGTAAAGAAATTCATCTGCGAAGAATGCGGCAAAAGGTTTTGCAGAAGAGAATATCTCAAAAGCCATGTACGCCGCCATCTAAGTCGAGATAAATTTTATAAATCGTCGGAACACAAACagaagaaagtactggaaaaagaaatctttcaaatagaagaatgcgccaaatcgaatgaaattaTCATCAAACACGAAATTATAGAAAACGATGTAGTCGACGATACCCACGATAACGACAATTCACCCTGCATTAATTTGAAAGACAATATTGATACTACAGCAAAACTTGGTCTGAAGGATCCGACAGAAGCCTCCTTCCACGGTAGCGCTATTGAACTAAATGATGTGAAAGCTATTAAAACTGATAAAATTTGTGGGATATGTAATCGTGCCTATAGACAACTtgatattcacatgagacgccataacaataaGCGGCCTTTCAGTGCTGATCGTTGCGATAAATCTTTCGCGACGTCCTGGAAATTGCGGCAGCACATGACAGTACACACGGGCGAAaagccttacgaatgtcaatactgtaatCGCCATTTTACTCAAAACAGCCACCGAAAAACTCACGAGCGCATACACACGGGTGAGAAGGCTTACGAATGTCAATAttgtgatcgccgttttgctgAAAAGAGCCACAAAAAAAGTCACGAGCGAATGCATACCggtgaaaggccatttttatgcccaacttgtggcaagagctttGCATATTCTCATGTCCTGTCGAACCATCGTCGAATTCATACCGGCATAAAGAAATTCATGTGCGAAGAATGTGGCAAAGGGTTCAACAGAAAGGAATCTCTCGAATGGCATGTACGACGCCACCtgagtcgagataaattggataaatcgtcggaacacaaacaaaagaaactactggaaaaggaaatctttcaaatagaggaatgcGCCAAATCGACTGAAATTATTGAAAGCGATGTAGTCGACAATACCCATGACAATGACACCTCGTCCTGCATTGATTTAGAAGACAGTGTTGATACTGCCGCTAAACTTGTTCAGAAGGATCCGATAGAAGCCTGTCTCCAGGGTAGCGCTATGGAACTAAATGATGTGAAATCCTATGAAAGTAATAAACCCAAACAGGACGCAAATGATAAAATTTCAAGACAACTAAGAAATGAGTCAAAGGCTCCAATTGAAAATACCTGCGATAAGCAAAGTCGCAAGACAGTGTATAATAAAGCCCCTaaaatttgtgagatatgtaatcgtggCTTTAAATATCAGGCGAGACTCACTATTCACATGAGACAccataacaatgagcgacctttcagctgtgatcgttgcgataaagctTTCGTAACCTCCTGGAAATTACGACGTCATTTGAAAGTACACACGGCCGAGAAGCATTACGAATGTCAATAttgtgatcgccgttttgctgAAAAGAGCCAGCGAAAAAATCATGAGCggacgcacacgggtgaaagaccatttgtatgcccaacttgtggcaagagctttGCATATTCTCATGTCCTGTCGAACCATCGTCGCATTCATACTGGCATAAAGAAATTCATGTGCAAAGAATGTGGCAGAGGGTTCAACAGAAAGGATTCTCTCGAAAGACATGTACGCCGCCACAtgagtcgagataaattggataaatcgtcggagcacaaacaaaagaaagtcCTGGAAATGGAAATCCTTTAA
Protein Sequence: MRHHSNERPFRCDDCDKAYFNSRDLRRHMKVHTGKKSYECQYCDRRFTENRSRKHHERTHTGEKPYECQYCDHRFAVTSSRKTHERTHTGEKPFVCPTCGKSFAHSGNLSQHLRSHTGVKKFICEECGKRFCRREYLKSHVRRHLSRDKFYKSSEHKQKKVLEKEIFQIEECAKSNEIIIKHEIIENDVVDDTHDNDNSPCINLKDNIDTTAKLGLKDPTEASFHGSAIELNDVKAIKTDKICGICNRAYRQLDIHMRRHNNKRPFSADRCDKSFATSWKLRQHMTVHTGEKPYECQYCNRHFTQNSHRKTHERIHTGEKAYECQYCDRRFAEKSHKKSHERMHTGERPFLCPTCGKSFAYSHVLSNHRRIHTGIKKFMCEECGKGFNRKESLEWHVRRHLSRDKLDKSSEHKQKKLLEKEIFQIEECAKSTEIIESDVVDNTHDNDTSSCIDLEDSVDTAAKLVQKDPIEACLQGSAMELNDVKSYESNKPKQDANDKISRQLRNESKAPIENTCDKQSRKTVYNKAPKICEICNRGFKYQARLTIHMRHHNNERPFSCDRCDKAFVTSWKLRRHLKVHTAEKHYECQYCDRRFAEKSQRKNHERTHTGERPFVCPTCGKSFAYSHVLSNHRRIHTGIKKFMCKECGRGFNRKDSLERHVRRHMSRDKLDKSSEHKQKKVLEMEIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -