Mmyr002620.1
Basic Information
- Insect
- Microdon myrmicae
- Gene Symbol
- ZNF212
- Assembly
- GCA_963931805.1
- Location
- OZ007496.1:96241076-96250840[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.09 10 7.6 1.6 2 23 107 129 106 129 0.96 2 20 4.4e-05 0.005 18.1 1.2 1 23 135 157 135 157 0.98 3 20 3.8e-06 0.00044 21.4 1.7 2 23 166 187 165 187 0.97 4 20 0.0003 0.034 15.4 2.2 1 23 193 216 193 216 0.97 5 20 0.00044 0.05 14.9 1.2 1 19 246 264 246 266 0.97 6 20 1.6e-06 0.00019 22.5 0.7 1 23 274 296 274 296 0.98 7 20 3.6e-06 0.00041 21.5 1.7 1 23 302 325 302 325 0.97 8 20 0.25 28 6.3 1.3 1 23 335 358 335 358 0.90 9 20 8.9e-06 0.001 20.2 1.5 5 23 450 468 447 468 0.94 10 20 3.7e-06 0.00042 21.4 0.3 1 23 474 496 474 496 0.98 11 20 1.5 1.8e+02 3.7 0.4 2 23 508 531 507 531 0.86 12 20 0.00013 0.014 16.6 1.2 1 20 537 556 537 558 0.93 13 20 0.00092 0.11 13.9 5.1 1 23 596 618 596 618 0.98 14 20 2.6e-07 3e-05 25.1 2.2 1 23 624 646 624 646 0.98 15 20 7.2e-06 0.00083 20.5 0.8 1 23 652 674 652 674 0.98 16 20 8.8e-05 0.01 17.1 3.8 1 23 680 702 680 702 0.97 17 20 5.6e-09 6.4e-07 30.3 1.4 1 23 799 821 799 821 0.98 18 20 0.00013 0.015 16.5 1.7 1 23 827 849 827 849 0.98 19 20 8.9e-06 0.001 20.2 0.2 1 23 856 878 856 878 0.99 20 20 7e-05 0.008 17.4 4.6 1 23 884 906 884 907 0.96
Sequence Information
- Coding Sequence
- ATGGAGAGCAACCCTGATTTCTTCTCTCCTTTGCCGGTTGGTACACCGACCACTTTTCTTAGCCAATTAAGCGACCCAGACGACAAGTTTCTTAAGCCAAGCGAATTGTACTCCTTTGAAATTGATAGTTTTCCAGTGCCAGGAATAGATGATATACCGACGGCAATTCCCAGTTTAAGCCCCATACCAGAAGAGACAGGATGTTCTTTAAGTGTTCCATCTTTTGATCAATTGTTTCCATCTGTCGAGACTGTGCCCGTTAGtcaaaattttgaaaattttcaaagtaATAAAGTATCACCTACGAATAAGCAAATTAAATGTGATTTATGCCAACAATCACTTCCGAATGTTCACGCTCTGCATCTTCACAGAAGGGTACAGCATACCTCATCGAAAGAGTTTCGTTGCAGAAAATGTCCACAATCTTTCAATTTTCAATCCAATCTTCTCTTACATTTGGCCTCCCATATCTCCAGCTGTGCCACAACCAAAGAATGTCCCGAATGTAAGAAAGTCTTCAAACGTTCCTCCAGCTTCAGAGGTCATTTAAAATCTCACCAAACAAACGATCGCTTCAAATGTAACCGATGTGAAAAGGAATTTGATTTTAAGAGCACATACGAAAAGCACTTAATAAAGGTCCACAAACCTGGAAGTGAAAATGAAGAGAATCTCATTAAACAGGCTGCAAGATCGAAGGGCCACATAAGAAACCGCATTATACAAGGAAAATATCGCTGCCAGAGCTGTGGAAAAGGTTTTACAAAACCATGCCTGCTGCGTCGTCACGAAGTGTGCCACACAGGTCAGAAACCTTTTCAATGTAATGAATGTAACCAAGGATTTACACAGAAGGCTTCATTAGAAAGGCATGAACGGCTGCATAGAGGAATAAAGGATTTCGAGTGTCCGAAATGCAATTGCAGCTTTGcacagaaaaacaatctaatcgTTCATATTCAACGTACGCATCCATCACGGCCAGATCTGGAAAAGATGTTCCCTTGTGAATATTGTTCATGTGTTTTTGGAAAGCTAAACAGCGTCAGTCGACATAAGGCGCTGATGCACCCAGTTCAGGATAATTCACAATCCGGCCAAAACAATGATGATGAAACTGTAGATGTAGCGAAAGTTATTGAACAACTAAAAGCTTTGCAGGAGCCGATGGGCGACGCAGATATACCGGCGGTTAGTCTGGAAGTTCCGACGGTAAAACCACCATCTCCGGCTCCCAAAATTCGAACTATCATGCTCGTAGATACTTTGAATCCAAACAAGGAGAAGACGTACACGATGGTCAAAGAGATTCTGCACAAAGGAAAGCGTACCATTGCATGCATCTATTGCGACAAATCATTCAAGAGGCAATTCGATTTGCTACGACATTACCGCACTCATACAAAGGAGAGACCATTTCAATGCAAGGTTTGTACGAAGAACTTTCCAACAAGTGCGGCTCTAAAAGTTCATTTGAACATACATTTTTCATCGTTGTCGAAGCCCGCAAAAGTGCATGCATGTGCTGTTGCAGGATGCGGTAAACTATTTTCTTCCCTTCGCAAGCTGGATTTCCATGCCAGAAGCCACGCCAGCACTATTGCCTACATTTGTCCACTTTGCTCGAAATCTTTTACATCGAAATCTGCGTTTTCCGCCCACAAACACCGAGACAATGACACGGAACTTAATATGATCCGGCCGCTTTTATTATCTCCAGTGAAACTAGAATCAAAAACTGTTGCAGCCTTAGAGAAATCCGAAGAGTACTGTAAGAGATCATACCAATGCTATATATGTGGATTGAAGTTTCAAAAATGTTCTCATCTCCGCCAACATGAAGCTACGCATTCCGGACACAAATCCTTCGTCTGTCCGATTTGTCACAGGTCATATACAACAAAGAGTTCCCTTAATCAACATTTGAAAATACATTCTTCTGAGAAGCCCTATAATTGTGATACATGTGATGCCCGATTCGTAAGTCAATTCCTGTTGAAGCGCCACATGATCACACATACAAATGAACGAAAATTTGCTTGTCCATATTGCACCAAACGATTCAAAAGCAACGACAACTGCAAGAATCACATCTTAACCCATGCCCGCACGTTACTGGCCACAACCGAGCATCAATGGGACGGGAAAGATTCGAATATTAACGAGCAACCGATTGAAGGAACTCCTTTAGAGAGTGTTTCTCAAGCATATATTGCCGTGGTACAGAGCCCTGGAAACAACCAGTCACCGAAATTTCTTCAACTTGAAATGATTAAAAACTGCAAAAGACATAATCATACGAACATTACATTCGATACCTTACCTGAAATGCCTAAAAAGCAGGCAAGGAAGTCGTTGGCGCAAACATTGAAACGAATCAACCAACCTATCCACCAGTGTGATGATTGTGGCAAAAGTTTTAATAAAGCCAGCGATTTGGAACGTCATATACGTACACATACCAAGGAGAAGCCATTTATTTGCACGGAATGTCCAAAACGCTTCGCGTTGATGTCGACGTTGACACACCATCTTACGACACATGATTCTCACCGTACTACATATGAGTGCCAAGTTTGTGGCAAAAAGTATGCATCACAAAAAGTTCTCACCGTACATTTACGGATACATACGGGTGAGCGACCATTCCAGTGTAATATATGTAATCAGACATTCCGGACTTCAGGCCATAAGATCTCACACATAAAGGTCCATCATAAGAAGAAAAAATGA
- Protein Sequence
- MESNPDFFSPLPVGTPTTFLSQLSDPDDKFLKPSELYSFEIDSFPVPGIDDIPTAIPSLSPIPEETGCSLSVPSFDQLFPSVETVPVSQNFENFQSNKVSPTNKQIKCDLCQQSLPNVHALHLHRRVQHTSSKEFRCRKCPQSFNFQSNLLLHLASHISSCATTKECPECKKVFKRSSSFRGHLKSHQTNDRFKCNRCEKEFDFKSTYEKHLIKVHKPGSENEENLIKQAARSKGHIRNRIIQGKYRCQSCGKGFTKPCLLRRHEVCHTGQKPFQCNECNQGFTQKASLERHERLHRGIKDFECPKCNCSFAQKNNLIVHIQRTHPSRPDLEKMFPCEYCSCVFGKLNSVSRHKALMHPVQDNSQSGQNNDDETVDVAKVIEQLKALQEPMGDADIPAVSLEVPTVKPPSPAPKIRTIMLVDTLNPNKEKTYTMVKEILHKGKRTIACIYCDKSFKRQFDLLRHYRTHTKERPFQCKVCTKNFPTSAALKVHLNIHFSSLSKPAKVHACAVAGCGKLFSSLRKLDFHARSHASTIAYICPLCSKSFTSKSAFSAHKHRDNDTELNMIRPLLLSPVKLESKTVAALEKSEEYCKRSYQCYICGLKFQKCSHLRQHEATHSGHKSFVCPICHRSYTTKSSLNQHLKIHSSEKPYNCDTCDARFVSQFLLKRHMITHTNERKFACPYCTKRFKSNDNCKNHILTHARTLLATTEHQWDGKDSNINEQPIEGTPLESVSQAYIAVVQSPGNNQSPKFLQLEMIKNCKRHNHTNITFDTLPEMPKKQARKSLAQTLKRINQPIHQCDDCGKSFNKASDLERHIRTHTKEKPFICTECPKRFALMSTLTHHLTTHDSHRTTYECQVCGKKYASQKVLTVHLRIHTGERPFQCNICNQTFRTSGHKISHIKVHHKKKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -