Basic Information

Insect: Microdon myrmicae
Gene Symbol: -
Assembly: GCA_963931805.1
Location: OZ007502.1:6950888-6955843[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.39 44 5.6 1.6 3 23 203 223 202 223 0.97

2 26 6.7e-05 0.0077 17.5 0.3 1 21 229 249 229 250 0.95

3 26 2.5 2.8e+02 3.1 4.0 1 23 257 279 257 279 0.85

4 26 1.4e-05 0.0016 19.6 0.3 1 20 285 304 285 307 0.93

5 26 2.7e-06 0.00031 21.8 0.5 1 23 313 335 313 335 0.97

6 26 1e-05 0.0012 20.1 0.1 1 23 462 484 462 484 0.95

7 26 0.00013 0.014 16.6 2.0 3 23 596 616 595 616 0.98

8 26 1.9e-06 0.00022 22.3 0.5 1 21 622 642 622 643 0.95

9 26 0.16 19 6.8 1.2 1 23 650 672 650 672 0.88

10 26 5.7e-07 6.5e-05 24.0 0.1 1 23 678 700 678 700 0.97

11 26 7.6e-06 0.00087 20.4 0.1 1 23 706 728 706 728 0.96

12 26 0.00024 0.027 15.7 2.1 3 23 852 872 851 872 0.98

13 26 8.6e-06 0.00099 20.3 0.1 1 21 878 898 878 899 0.95

14 26 0.011 1.3 10.5 1.4 1 23 906 928 906 928 0.97

15 26 5.8e-05 0.0066 17.7 2.1 1 23 934 956 934 956 0.98

16 26 7.8e-05 0.0089 17.3 0.4 1 23 962 984 962 984 0.96

17 26 0.00043 0.049 14.9 1.3 3 23 1111 1131 1110 1131 0.98

18 26 3.4e-05 0.0039 18.4 0.1 1 21 1137 1157 1137 1158 0.95

19 26 0.0017 0.19 13.1 0.9 1 23 1165 1187 1165 1187 0.99

20 26 0.00013 0.015 16.5 5.0 1 23 1193 1215 1193 1215 0.98

21 26 1.8e-05 0.0021 19.3 0.3 1 23 1221 1243 1221 1243 0.96

22 26 0.00035 0.04 15.2 1.5 3 23 1373 1393 1372 1393 0.98

23 26 3e-06 0.00035 21.7 0.1 1 21 1399 1419 1399 1420 0.95

24 26 9.4e-05 0.011 17.0 1.7 1 23 1427 1449 1427 1449 0.99

25 26 6.5e-06 0.00074 20.7 0.7 1 23 1455 1477 1455 1477 0.99

26 26 0.0012 0.13 13.6 0.6 1 20 1483 1502 1483 1502 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.39	44	5.6	1.6	3	23	203	223	202	223	0.97
2	26	6.7e-05	0.0077	17.5	0.3	1	21	229	249	229	250	0.95
3	26	2.5	2.8e+02	3.1	4.0	1	23	257	279	257	279	0.85
4	26	1.4e-05	0.0016	19.6	0.3	1	20	285	304	285	307	0.93
5	26	2.7e-06	0.00031	21.8	0.5	1	23	313	335	313	335	0.97
6	26	1e-05	0.0012	20.1	0.1	1	23	462	484	462	484	0.95
7	26	0.00013	0.014	16.6	2.0	3	23	596	616	595	616	0.98
8	26	1.9e-06	0.00022	22.3	0.5	1	21	622	642	622	643	0.95
9	26	0.16	19	6.8	1.2	1	23	650	672	650	672	0.88
10	26	5.7e-07	6.5e-05	24.0	0.1	1	23	678	700	678	700	0.97
11	26	7.6e-06	0.00087	20.4	0.1	1	23	706	728	706	728	0.96
12	26	0.00024	0.027	15.7	2.1	3	23	852	872	851	872	0.98
13	26	8.6e-06	0.00099	20.3	0.1	1	21	878	898	878	899	0.95
14	26	0.011	1.3	10.5	1.4	1	23	906	928	906	928	0.97
15	26	5.8e-05	0.0066	17.7	2.1	1	23	934	956	934	956	0.98
16	26	7.8e-05	0.0089	17.3	0.4	1	23	962	984	962	984	0.96
17	26	0.00043	0.049	14.9	1.3	3	23	1111	1131	1110	1131	0.98
18	26	3.4e-05	0.0039	18.4	0.1	1	21	1137	1157	1137	1158	0.95
19	26	0.0017	0.19	13.1	0.9	1	23	1165	1187	1165	1187	0.99
20	26	0.00013	0.015	16.5	5.0	1	23	1193	1215	1193	1215	0.98
21	26	1.8e-05	0.0021	19.3	0.3	1	23	1221	1243	1221	1243	0.96
22	26	0.00035	0.04	15.2	1.5	3	23	1373	1393	1372	1393	0.98
23	26	3e-06	0.00035	21.7	0.1	1	21	1399	1419	1399	1420	0.95
24	26	9.4e-05	0.011	17.0	1.7	1	23	1427	1449	1427	1449	0.99
25	26	6.5e-06	0.00074	20.7	0.7	1	23	1455	1477	1455	1477	0.99
26	26	0.0012	0.13	13.6	0.6	1	20	1483	1502	1483	1502	0.96

Sequence Information

Coding Sequence: ATGTCGCGTTTGATTGACTGGAAAAGCGTATGCTTAATTTGTTTAAAGCAAGGTGAGAATCGTTCTATTTTCGAACAAGACGATGACTCAAATGTAATTGCCGATAAAGTAATGAAATGctcgaatattactattgaaaaagGGACAGATAAACTAAAAATCATTTGCTTAGAGTGCCTCGATGACCTAAATGTTACCTATAAATTCCGTCGAAACTATGAGCAGTCACGCTCTATAATCAAATCATTTCTAAATACAAATCACAAACAATTTGAATTAAAGGACTTCCGGAACAAGCTACCAATCACAATGAACCCAACACATGACATTGGCATTAAGGATGAAACTACGGAAATGATTGCAATCGGCGATTCTTACGACGACAAGAGGACACCCTGTTTTGACTTGAAAGATATTCCCGATACTGAAACGAAATTTGTTGTTGAAGATCGTGTCCAGAGTAGTGCTACGGAACTACATAATGTGAAAGCCAATGAAAGTAATAGAATCAAACAGGAGGCAAAGGAGGAGATTTCAACGGGTTCAGCTGAAGTGTCCAGTCCAAAGCGTAGTGTCAAGTCGACTTATAAAAGACCCCTGAAAATATGCGAGATATGTAATCGTAATTGTTGGGGTCAACGGGATTTCAAAATTCACATGATGCGCCACaataatgagcgacctttcaattGTGACCATTGCGACAAATCTTTTGCAACCTTGGGGGGCTTATATCGCCATGTCAGAGGATACAGTGGCCTGAGACCAcataaatgtcaatactgtgaccgtGCGTTCCTTGACATTCACGTCAAAAGAAATCACGAACGCACACACACGGATGAAAGGCCATATGTATGCCAGACTTGTGGCAAGAGCTTCAGATATTCTTACGCCTTGGCACGACATCTTCCAGTACATGATGTCGAAAAGAAATTCGTTTGCAAAGAATGCGGAAAAGGATTCACCAGAAGGACGCAGCTTGAAACGCACGCAGCCCGTCACTTGGCTCGGGATGAATTGGATAAATCATCGGAGCtcaaacaaaagaaaattgtGGAAAGAGAAATCTTCCAAGTAGAGGAATGCGCCAAttcgaacgaaattaacatcaaacatgaaattgttgaCAACTCCGTAATTGACGATCCTGGTACTGAAGCTAAATTTGCTGTTGAAAATCGTGTAGAAGATTGCGTCCAAAATGAAACCGACTATGGAAGTAAGAAAACCAAACTGGAGGCGAATAATGATATTTCCACACGTTTCAGCGGTCAGTCAAAGACTTCAACCGAACAATCCTCTGATAAGCCAGCCCCCAAGTCAACTTATAAAGCACCTCTGAAGATTTACCATCTTCGAGTTCATACTGGCGAGAAGAAATTTGTGTGCACAGAATGTGGAAAAGGATTCGCCAGAAAGGTGCTGCTTGAGCGGCACGCAGTTCGTCATCTGGTTCGAGATAAACTGAGTGAATCATCGGAACTCAAACCAAAGGAACGGCACGAAAAAGAAATCTTCAAAATAGAGGAGTGCGCCAATTCGAACGAAAtcaacatcaaacatgaaattatagacATCGCGGTAGCCGACGATTATGGTGGCGACAACTCGCACTGCCTTGATTTGGGACATGATCCTGGTACTAATGTGAAAGCCAATGAAAGTAATAAAATCGCACAGGGGGCGAACGGCGAACTTCCAAGACGACTCAGAGGTCAGCCAAACACTTCAGTTGAAGGGAAGCCAAGCCCCCTTTCGGCCTATAAAAAACCCCTAAAATTTTGTAAGATATGCAATCGCAGTTATAGAGGTCAACGGGAATTCAccattcatatgagacgccataaTAATGaacgacctttcagttgtgacCATTGCGACAAAACGTTTGTGACGGCAACTGATTTACGGCGTCATGTGAGAGTGTACACTGGCCAGAGACCTTACAAATGTCGGTACTGTGATCGTGGTTTCGTTGACACCCAAATTAGAAAGAACCATGAGCGCATCCACACGGGCGAGAAACCATTCGCATGCCCAACTTGTGGTAAGAGCTTTACGGTTTCTGCCTCGCTGAAGGAACATCTTCGAGTTCATACTGGGGAAAAGAAATATGTATGCAAAGAATGCGGCAAAGGATTCACCAGAAAGGCGAAGTTTGAAGCACACGCAGCCGTTCACCTGTCTCAAGACAAATTGGCTAAAACATCCGAGAATAAACAACAGGAAAAagaaatctttcaaatagaggaaAACCAGAATTCGAACGAAATTaatatcaaacatgaaattatagacAAAGGTGTAGTCGAAGAATCTTGCGTTGATGACAACTCGCCGTGCCTTAATTTGGGAGAAGACACTGATACCACAGCTAAATTGGTTGTTGAAAATTATACAGATACCTCAGACcagaaaaacgctaaggaaatCAATCAGGAGGCGAATAATGAAAGTTCCATATGTCTCAGCGGCCAATCAACGGGTTCAGCTGAGGTATCCGGTGTAAAATCAAGCCTCAAGTCGGCCTATAAAAGACCTCTTAAATTTTGTAAGATATGTAATCGCAGTTATAGAGGTCAACAGGAATTCACtcttcacatgagacgccataataatgagcgacctttcaattGCGACCATTGCGACAAAGCTTTTGTGAGTGCTGCCGAATTACGTCGTCATGTGAGAGTGTACACTGGCCAGagaccttacaaatgtcaatactgtgatcgagGGTTCGTTGACTCTCAAATCAGAAAGAACCACGAGCGCACACACACGGATGAAAGGCCATACGTATGCCTGACTTGTGGCAAGAGCTTCCGATATTCTTACGCCCTATCACAGCATCATTCAGTTCATAGTGCGGTCAAAAAATTCGTGTGCCAAAAATGTGGTAAAAGATACACGAGGAAGTCCGTTCTAGATGCACACCTAGCCCTACACCTGTCTCAAGATGAATTTGATAAATTGTCAGAGCACAAAGAAAAGAAGCAGCTGcgcaaaaaaaatttcaaaatagATGAAAACAAGGAttcgaacgaaattaacatcaaacaagaAATTATAGACAACACTGTACCCGACGATTCTTGCGGAGACAACAACTCGCCCTGCCTTGATTTGGGAGACGAACCTGATGCTGAAGCTAAAATGGATGTTGAAAATCATGCAGATACCTGTGACCAGAGTAACGCTGAAAAAACCAATCAGGATGCGAATAATGAAGGTTCAATATGTCTCAGCGCCCAGTCAACGGGTTCAGCTGAGGTATCTGGTGCAAAGCCAAACCTCAAGAAGGCCTATAAAAGACCCCTGAAATTTTGTAAGATATGTAATCGCAGTTATATAGGTCAACAGGAATTCACTCTTCATATGAGGCGCCATaataatgagcgacctttcagttgtgacCACTGCGACAAAGCTTTTGTGAGCGCGGCCGAATTACTTCGTCATGTGAAAGTGTACACTGGTCAGAgaccttacaaatgtcagtactgtgatcgAGGGTTCGTTGACGCCCAAGTCAAAAAGAATCACGAGCGCACACACACGGATGAAAGGCCATACGTATGCCTGACTTGTGGCAAGAGCTTTAGATATTCTCACACCCTACAACAACATCATTCAGTTCATAGTGCAGTCAAGAAATTCGTGTGCCAAAAATGTGGCAAAGGATATACGAGGAAGTCGGTTCTAAAAGCGCACCTAGCCCTACACCTGACTCAAGATGAATGTGATAAATTATCGGAGCGCAAACAAAACTTCCAAATTGAAGAAAACAAAGAttcgaacgaaattaacatcaaacctGAAATTATAAACAACACTGTAGCTGACGATTCTTGCGGCGACAACTCGCCCTGCCTTGACTTGGGAGACGATCCTGATACTAAATCTAAATTGGTTGTTGAAAATCATGCAGACACTTGTAACCAAGGTATCGCTACGGAACTAAATAATGTGAAAGCTATTGAAAGTAAAAAAGCCCAACACGGGGAGGATAATAAAAGTTCAATACGTCTCAGAGGTCAGTCAAAGACTTCAACCCAAGTATCCTCTGATAAGCCAATCTCCAAGTCAACTGATAAAGCACCTCTGAATATTTGTAAGGTATGTAATCGCAGTTTTAAAGGTCAACAGGTATTCAaaattcacatgagacgccataataatgagcgacctttcagttgtgacCATTGCGACAAAGCTTTTGTGAGAGCGGCCGAATTACGTCGTCATGTGAGAGTGTACACTGGTCAaaaaccttacaaatgtcagtactgcgATCGTGCGTTTGTTGATGCCCATGCGAGAACCAACCACGAACGCacacacacgggtgaaaggccatatGTATGCCTGACTTGTGGCAAGGGCTTTTCGTATTCCACTTCCCTATCAGATCATCTTCGAACTCATACTGGCGAAAAGAAATATGTGTGCACAAAATGTGGCAAAGGGTTCAACAAAAAGATGCTTTATACAAGCCACATACCCTGTCAGCCCACGCAAGGAGAAGTGGATAAATTAATGCCCAAACAAGAGAAAAtgctagaaaaagaaatcttccaagtAGAAGAATGCGTTAActcgaacgaaattaacatcaaacatgaggtGAAACTAATAGAGGAGGAAATTAATTAA
Protein Sequence: MSRLIDWKSVCLICLKQGENRSIFEQDDDSNVIADKVMKCSNITIEKGTDKLKIICLECLDDLNVTYKFRRNYEQSRSIIKSFLNTNHKQFELKDFRNKLPITMNPTHDIGIKDETTEMIAIGDSYDDKRTPCFDLKDIPDTETKFVVEDRVQSSATELHNVKANESNRIKQEAKEEISTGSAEVSSPKRSVKSTYKRPLKICEICNRNCWGQRDFKIHMMRHNNERPFNCDHCDKSFATLGGLYRHVRGYSGLRPHKCQYCDRAFLDIHVKRNHERTHTDERPYVCQTCGKSFRYSYALARHLPVHDVEKKFVCKECGKGFTRRTQLETHAARHLARDELDKSSELKQKKIVEREIFQVEECANSNEINIKHEIVDNSVIDDPGTEAKFAVENRVEDCVQNETDYGSKKTKLEANNDISTRFSGQSKTSTEQSSDKPAPKSTYKAPLKIYHLRVHTGEKKFVCTECGKGFARKVLLERHAVRHLVRDKLSESSELKPKERHEKEIFKIEECANSNEINIKHEIIDIAVADDYGGDNSHCLDLGHDPGTNVKANESNKIAQGANGELPRRLRGQPNTSVEGKPSPLSAYKKPLKFCKICNRSYRGQREFTIHMRRHNNERPFSCDHCDKTFVTATDLRRHVRVYTGQRPYKCRYCDRGFVDTQIRKNHERIHTGEKPFACPTCGKSFTVSASLKEHLRVHTGEKKYVCKECGKGFTRKAKFEAHAAVHLSQDKLAKTSENKQQEKEIFQIEENQNSNEINIKHEIIDKGVVEESCVDDNSPCLNLGEDTDTTAKLVVENYTDTSDQKNAKEINQEANNESSICLSGQSTGSAEVSGVKSSLKSAYKRPLKFCKICNRSYRGQQEFTLHMRRHNNERPFNCDHCDKAFVSAAELRRHVRVYTGQRPYKCQYCDRGFVDSQIRKNHERTHTDERPYVCLTCGKSFRYSYALSQHHSVHSAVKKFVCQKCGKRYTRKSVLDAHLALHLSQDEFDKLSEHKEKKQLRKKNFKIDENKDSNEINIKQEIIDNTVPDDSCGDNNSPCLDLGDEPDAEAKMDVENHADTCDQSNAEKTNQDANNEGSICLSAQSTGSAEVSGAKPNLKKAYKRPLKFCKICNRSYIGQQEFTLHMRRHNNERPFSCDHCDKAFVSAAELLRHVKVYTGQRPYKCQYCDRGFVDAQVKKNHERTHTDERPYVCLTCGKSFRYSHTLQQHHSVHSAVKKFVCQKCGKGYTRKSVLKAHLALHLTQDECDKLSERKQNFQIEENKDSNEINIKPEIINNTVADDSCGDNSPCLDLGDDPDTKSKLVVENHADTCNQGIATELNNVKAIESKKAQHGEDNKSSIRLRGQSKTSTQVSSDKPISKSTDKAPLNICKVCNRSFKGQQVFKIHMRRHNNERPFSCDHCDKAFVRAAELRRHVRVYTGQKPYKCQYCDRAFVDAHARTNHERTHTGERPYVCLTCGKGFSYSTSLSDHLRTHTGEKKYVCTKCGKGFNKKMLYTSHIPCQPTQGEVDKLMPKQEKMLEKEIFQVEECVNSNEINIKHEVKLIEEEIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -