Mmyr009451.1
Basic Information
- Insect
- Microdon myrmicae
- Gene Symbol
- -
- Assembly
- GCA_963931805.1
- Location
- OZ007497.1:151003692-151004897[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-11 4.8e-08 33.4 0.0 5 44 65 104 61 105 0.90 2 2 0.11 2.9e+02 2.1 1.4 4 18 192 205 191 207 0.91
Sequence Information
- Coding Sequence
- ATGGAAATTTTGCTTTTATTTCAGAAATCAAAATACGATGAATCTCATTCGCCATACACAGATCGGTCGTATGAAGACGATGGTCTAGATTGCCCGCAAGGTTACTCTGGAGAAAACCGTATAAGCTCTTTTGGCTCCCAACAGCAACAAAAACCCGAGTGGAAGAGATACAAACAATACACTCGTAGTGATATTTTCCAAGCAATCGAATGTGTTAAAAATGGAATGAGCGCATTACAAGCATCACGGAAGTTTGGTGTTCCTTCACGGACACTCTATGATAAAGTCAAAAAACTTGGTATAACTTCTGGCCGCCCGACGAATCGAACGATTAAGCGCAGTCCAAGTACTGGTGGTAATAGTAGCGCTGCTTTCCCTTACAGTCACGGTTATGGTCAGTCTGAGCCATTACTATCGTCAATGCACGATGGCGGAGAGCGTGAAAAGGAGCACGAACGTCATATCCCACCAACAATATCTCATCCCGCTGCTGCACTTTTAGATCCTGCGTTCCTGCAAGCCTTCGAAAGTCGGGGTGGAGACATTGCCGGACGGGAAGCCTTACATGCCATGGCCTTAGCAGCAGCAGCTCATGCGGCTGTTAACGGCATGTCTTCAAGTCCTGGTACAAATGGCACTGCACGTTCGCCCAGTCCAAGCTTCGGAATGAAATATGCTCAATCGCACAGCCCTAATCCACATCGATATCATGAACGAGAAAGAGAACGAGAACGAGAACGAGAACGAGAACGGGAACGGGAACGGGAACGGGAACGAGAACGAGAACGAGAACGTGATCGCGACCGTGACCGTGAGCGTGAACGGGAACGGGAACGTGAACGTGAACGAGAACGTGAGCTCCTCATCAAAAGAGAAAAAGAACGCGAATTAGAACATGAAAGAGGACGTGAAATAGAAAGGAGTTTACTAAGCCGAGATGTTattgaaaaagaacatttacagCGTGAACCCGTCGACCTTGATCATGAACATAGAGAACATCATGTCGATCATGATGACGACGATGATCGTGACCATGTCGAAGATCTCTCCGTATCTCGCAAGGATAAATTATCTCCAAGTCCGGCAAGTCATCATGGTGTGATTATGCCTCCAATGAGTACAAAAGTTCCCACAATTAATTGCGATGATTACAAAGTAAGTGAAACTACTAAACGTGATATCCTAAATGAGGATCgtaattaa
- Protein Sequence
- MEILLLFQKSKYDESHSPYTDRSYEDDGLDCPQGYSGENRISSFGSQQQQKPEWKRYKQYTRSDIFQAIECVKNGMSALQASRKFGVPSRTLYDKVKKLGITSGRPTNRTIKRSPSTGGNSSAAFPYSHGYGQSEPLLSSMHDGGEREKEHERHIPPTISHPAAALLDPAFLQAFESRGGDIAGREALHAMALAAAAHAAVNGMSSSPGTNGTARSPSPSFGMKYAQSHSPNPHRYHERERERERERERERERERERERERERERDRDRDRERERERERERERERELLIKREKERELEHERGREIERSLLSRDVIEKEHLQREPVDLDHEHREHHVDHDDDDDRDHVEDLSVSRKDKLSPSPASHHGVIMPPMSTKVPTINCDDYKVSETTKRDILNEDRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -