Mmyr011050.1
Basic Information
- Insect
- Microdon myrmicae
- Gene Symbol
- -
- Assembly
- GCA_963931805.1
- Location
- OZ007497.1:225658499-225673431[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.7e-13 1.8e-09 38.0 0.0 2 39 31 68 30 71 0.94 2 3 3.9e-07 0.0011 19.5 0.0 1 43 85 128 85 130 0.95 3 3 0.11 3e+02 2.1 0.0 2 19 138 155 137 156 0.90
Sequence Information
- Coding Sequence
- ATGTGCCGCTGGGTGGTTGTCTTGCAGGAATACGGCACCTACGTTCGATTGACTGGCATCTACTTGAAGGCCGGAGCAAAACCATGGAATGAAGATTCATTAAACAGTGCCTTAGAAGCTCTTAGAACAGGCCAGACATCGAAAAATAAAGCCTCTAAAGCTTATAGTATTCCGTGCTCTACATTATATAAAATCGCCAGACGGGAAGGTATACGATTAGCTGGACCATTTAATTCAGTTCCAACAACATGGACACCAGAAGATTTAGAGCATGCTTTAGAAACAATTCGCGCTGGTGATACATTTGTTCAAAAGGTCAGTTCAGAATTCGGCATACTAACAGGAACACTATGTGGTAGATGTCAACGAGAAGGTATTGAACTGCCCCGCTCAAATCCTGCCCCATGGTCACAGGATGCTATGAAGGAAGTACTTAACTCTGTTAGAGTTAGCCAAATGTCTGTACCCATGATATTCGCTCTAATGAGTTGTAAATTATACAACACTTATAGGGTCATTATGCCCgattttgttgttgtgtttttttacTTTATCCCTGAGGTGATCAAACTGGCCGTAAACGGAGCTAGTTTCTGA
- Protein Sequence
- MCRWVVVLQEYGTYVRLTGIYLKAGAKPWNEDSLNSALEALRTGQTSKNKASKAYSIPCSTLYKIARREGIRLAGPFNSVPTTWTPEDLEHALETIRAGDTFVQKVSSEFGILTGTLCGRCQREGIELPRSNPAPWSQDAMKEVLNSVRVSQMSVPMIFALMSCKLYNTYRVIMPDFVVVFFYFIPEVIKLAVNGASF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -