Mmyr027293.1
Basic Information
- Insect
- Microdon myrmicae
- Gene Symbol
- -
- Assembly
- GCA_963931805.1
- Location
- OZ007502.1:22215783-22216829[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2e-14 5.5e-11 42.8 0.1 1 45 121 166 121 166 0.94 2 3 0.27 7.4e+02 0.8 0.0 28 37 195 204 186 208 0.86 3 3 2.7e-09 7.3e-06 26.4 0.1 4 39 234 269 232 275 0.91
Sequence Information
- Coding Sequence
- ATGAGAGAAGAGACTGAAATACTAGATGGTAGTGAAATGTATTCAGAGTCAGTTCCTACTCAAATGCAACGGCCAACGGTGATACATGGGCCCATATCTTCCCCACAGCAACAGTATATAATATTCGAAATAAAATCGCTTACAGAACAAACAGTAAACTATGTAATAACAGAAGCTCCAAAAACAGTTATCGCACCTAATCCTAATTATAAATGCAATCAAGTTGCAAAACCCAGTACATCCAAAAATGTGAATAATGATGATAAAACGCGTGATCCATACATTGTACAAATAGAGATAGCAGATCGAAATACACAAGAAGAAACCAAAGAAAATACTCTAAAACCCCTCCGAAATAAGGACCCAGAGAAACTCGCGGCCGCTGTTGATGCGGTGGTCAGAAAACAACTAAGTATAAGTGCGGCGGCCAGAATATACAATTTATCAAAGAGTACTGTGTGGAAAGAGGCCACTAAACGAACTAACCATTGTCAAAGGAAAATTGATCACGATCTCAACAAGAAGATCGCCGATCGAATATGTTCTGGTGAACCACTTTCACAGATCTCAAGGTGTCTCAAAATAGCTAAGTCGACCCTGCATCAGCATAAAGTACGTCTGGCACGATCCGGTAAATTACCCGCTGCAGTTCTCTTAAAGCCCCCAATTGATCCAGCGGAGAAAGTTGATAAGTCAAAGCGTATGGAACTTGCTTTTCGGGATTGCCTGCTCAATGGCGTGTCTATCCGCTCCGCTGCACAGACCCATTCAATAGCTCGATCGAGTTTGTGGAAATACATAAGGCGGTACAAGAATTACATGAAAATGGCAGCTGCTCAAAAAGTGGAGTCGAGTTACGAAGAAATTCCTTCACCACTCCCTTCAGATAATGATAATCCCATTGTATCTACATTCCAAGACGATGATTCGAGGACTCTTGACGTTCTTGGCCAGGACAACATTGAAACATTCGAATCAGAGGAAAATTTAACCTTTGACATCAAGCAGTTTGAAGAGCTCCTTGAGAATGAATTCGCCAACTTGTAA
- Protein Sequence
- MREETEILDGSEMYSESVPTQMQRPTVIHGPISSPQQQYIIFEIKSLTEQTVNYVITEAPKTVIAPNPNYKCNQVAKPSTSKNVNNDDKTRDPYIVQIEIADRNTQEETKENTLKPLRNKDPEKLAAAVDAVVRKQLSISAAARIYNLSKSTVWKEATKRTNHCQRKIDHDLNKKIADRICSGEPLSQISRCLKIAKSTLHQHKVRLARSGKLPAAVLLKPPIDPAEKVDKSKRMELAFRDCLLNGVSIRSAAQTHSIARSSLWKYIRRYKNYMKMAAAQKVESSYEEIPSPLPSDNDNPIVSTFQDDDSRTLDVLGQDNIETFESEENLTFDIKQFEELLENEFANL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -