Mmyr013571.1
Basic Information
- Insect
- Microdon myrmicae
- Gene Symbol
- -
- Assembly
- GCA_963931805.1
- Location
- OZ007498.1:83479100-83482534[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8e-14 2.2e-10 40.9 0.0 3 43 285 325 283 327 0.91 2 3 0.0075 20 5.8 0.0 27 37 356 366 347 371 0.87 3 3 5.9e-17 1.6e-13 50.9 0.0 3 41 394 432 392 434 0.93
Sequence Information
- Coding Sequence
- atGAACCACCTAAAGTGGATGGGCCACACATCAACTATCATTGATACCCAGAAAACGTGGAAGGATGATTTTGATACATCGGATATTACGATTATTTTTCGCGGAAAGGCTGCAAAGGCACATCGTTTCATTTTATCAGCATGTAGTGATTTAATGCGAGATGCCCTTATTGATGTACCACCAGGGCAGGAGGCTACCATTATTATACCTGATATTAAAGGCTCTCTACTTGATAGTGTATTGAGCTTTGTTTACATGGGCGAAACGAGTTTATCATCGACGAACTTGTCCGAATTTCTAGAAGCTATCAATGTACTAGGTATAAGGAGCGCTATAAGCTTTCAATGTGCAAACAATGTAATCAATGCAAGCAAAAATATTGAAATGACCGATGTTGAAGAGTTAATGGAAAACGAAGGTGAAAACGATATTATCGATAAAGACGTTGAAGagGATCAGCAAGTCGAAGGTAGCAGTGTACGAGAATTGGAGTTCCTTGAGGTCTACAGCGAACAGGGAAAATTGAATTACACTATAGAAAATATAAATCCATCTAACCCAAATGAGTATATATTAACGGAAAATGGCGGTGAATCATTCACTTTATCATCGGATACAAAAATGGATGCCAATGACCCTGGAGGTCTTGTTGTCAAATGCGACGAGGATAATGCCATAATGGAACATTACGTGACAGACCCAATCGGAGATAGCAGTCAATGTTCTAGCACCGATATGAAAGACACGAAACcaataaaaaaactaaaggatgAATTCAGTGAATTTCAAGCTCTTAGCCCAGAAGAAACAAAGGGTTATCGAGGATTTAATGAAACTCAATTAGCCCGCGTTGAGGCATTAGAAAATGCCGTATTAGCTGTGGTTGATGAAGGCATGAGTTTACAAAAGGCAGCTTATAAATTTAATATTTCAAAAACTGTACTCTGGAGGCGTGTAAAGAAGCATCCACTTTATATGAAGACAACACGAGAAAATCCATTAATAACTGCTGCATGTGAACGTTTAAAGAATGGTGACTCCTTGAAAAGCATTAGTCAAGCATTGGACATACCTATGTCGACATTACATCGTCACAAAGTAAGATTGGCACAAGAGGGTCGGCTCCCAGAATATGTTAGTTTTAAAAAACGTGGACCCCTGTCAAAGGAAATGCTTAAAGAAAAATTAACAAAAGCCGTTCAAGCTTGTATCGGAAACGGGATGTCTCAGAATCATGCTGCAAATGTATTTGAAGTTCCAAAAAGCACCTTATGgcgacatttgcagaaaaagatgtACCGGCCCGACAAAACTGAAGTCAGCGTTAAGGAGGAAGTGGTTTTACCCTAA
- Protein Sequence
- MNHLKWMGHTSTIIDTQKTWKDDFDTSDITIIFRGKAAKAHRFILSACSDLMRDALIDVPPGQEATIIIPDIKGSLLDSVLSFVYMGETSLSSTNLSEFLEAINVLGIRSAISFQCANNVINASKNIEMTDVEELMENEGENDIIDKDVEEDQQVEGSSVRELEFLEVYSEQGKLNYTIENINPSNPNEYILTENGGESFTLSSDTKMDANDPGGLVVKCDEDNAIMEHYVTDPIGDSSQCSSTDMKDTKPIKKLKDEFSEFQALSPEETKGYRGFNETQLARVEALENAVLAVVDEGMSLQKAAYKFNISKTVLWRRVKKHPLYMKTTRENPLITAACERLKNGDSLKSISQALDIPMSTLHRHKVRLAQEGRLPEYVSFKKRGPLSKEMLKEKLTKAVQACIGNGMSQNHAANVFEVPKSTLWRHLQKKMYRPDKTEVSVKEEVVLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01002910;
- 90% Identity
- iTF_01002910;
- 80% Identity
- iTF_01002910;