Mhyp004420.1
Basic Information
- Insect
- Microctonus hyperodae
- Gene Symbol
- zfy1
- Assembly
- GCA_030347285.1
- Location
- JAQQBR010000004.1:4764973-4776650[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 5.9 4.2e+02 1.4 1.3 2 22 13 33 12 33 0.89 2 17 4.4 3.2e+02 1.8 0.4 3 23 342 364 342 364 0.86 3 17 1.4 1e+02 3.4 0.9 2 23 427 447 426 447 0.95 4 17 0.0022 0.16 12.2 2.0 2 21 560 579 559 583 0.90 5 17 0.0044 0.32 11.2 0.5 2 23 598 620 597 620 0.96 6 17 0.2 14 6.0 0.4 1 23 634 658 634 658 0.92 7 17 1.6 1.1e+02 3.2 3.4 3 23 682 703 681 703 0.94 8 17 0.018 1.3 9.4 0.4 1 21 708 728 708 729 0.95 9 17 2.7 1.9e+02 2.5 1.4 2 23 751 772 751 772 0.93 10 17 4.7e-06 0.00034 20.6 2.7 1 23 822 843 822 843 0.99 11 17 2.6e-05 0.0019 18.3 1.5 1 20 849 868 849 870 0.94 12 17 5.1e-06 0.00037 20.5 1.0 1 23 897 919 897 919 0.97 13 17 0.012 0.88 9.9 0.0 1 23 924 949 924 949 0.93 14 17 0.0039 0.28 11.4 3.4 1 23 958 980 958 980 0.97 15 17 0.014 1 9.6 6.7 1 23 989 1013 989 1013 0.96 16 17 0.0017 0.12 12.6 0.4 1 21 1019 1039 1019 1044 0.93 17 17 0.36 26 5.2 0.6 1 23 1050 1074 1050 1074 0.93
Sequence Information
- Coding Sequence
- ATGGAGACAAATTTTGAGGATGACGATGATACTCATTATTGCATCAAGTGTCATATGACGGTAAATGGATTGGACAATTATGTGCGACATCGTCAAACAGGATGTCGGCCGtcagagagaaaaaatgcTGTAACACCCGATCCACCAACGCCCACTGTGTCTTATCCGGAAATCCTTAATGCCGATGCATTTTTCAGTTCATTAGAGTTACAAAGTAGTGCGAAATCAAAATCAACTGGTGCTCGAAGTGGTCacgaggaagaaaaaaaattagagaaacGTGGCGATAAACGTAAAAAAACGCGAcgatataatgaaattgatgTTCCAAgtccaaaagaaaaattaatgacattACCGCCAGTTGTCACTGATTTAGATGATCCTACTGATCATATTGGTATTCCGTCACTTGTGGGATTTCCAGATATAGTGACATTCACTGATAAAGCATCGACTTCAACGAAAATCCAGTCATCTGGAGTTCCAAAGCCAAGTGATAGTGATAAAAAACGTGGAAATGATGAGCACCAAGTTTGGTCAGACGACGATTCAGAAGATATTGACGAAAATGAAATGACAAATGTTGAAGACGAATTGGAAAGCGAAGAAGATTTCGATTACCCACATGATGAGGATACAAATGATAGTCAAGTTGATGATATTGATCAAGTCGATTCTTATTCAGAAACTGATGAAGCTGACGATAGAGAATATCCACCACAAGCGCATACAGGAGGTAAATGGAAGCCTGGCCAATTACTTCAACACATGATAAGACAGAATGACGATGATATTGATCATGATGATGATCAGGATAATTCAAGGCCTGCCCACACTGGTGGAAAATGGAAACCTGAGAAAATCAATGAGGATGAACTCGAGGATGATGGTAAAgacgaagaaataaaagataacGCATTAATAACAAGAAGCAGTAGCGCCAGACAACCACCACCAGGTCACACACACGGTAAATGGATTCCGGGTGCTATGACAATGCCGTCGGAACATGGATATTGGTGTAGTCCATGTGGCCGAAAGCTTGCATCTAAATTAGTTTACAACCGACATTTACGTTCGGATTTGCACGCACGACGTAGTATTCAGGAGATTGAAGGTGACGTTAAATTACCACGATCTGTTGGGCCTTTATTACGTAAAAAATGTCGTAGTCGACGTCAACAAATTCTCGCAatgaAACGATTCGAGACAAAGAGTACAATAGTAGACAATAAAGCGACAAAAAAAAGACGATGCAGAGAAAAAGAGTTTGTACGGTGTGAAATGTGTCATGCTCGTGTGCGTCGTATTCAGTTGGGCAAACACCTGCTCTCTCACTACCACTGTCGTGTTGCAGGATTAAATCCCTGCAGTCCTGCCGCACGACGTTTTATCCTGGAGAACATGGCTAACGTGGTTCGCCAATGTCCATTTCAGTGCTCATGTTGTCGCTTTTATTGCAACACTGAGGAAACCTTTTTGCTACATTGGCGCTCTAATCTACACTCTCAAATTCAGAATGAcgatgaaagtaaatatatttgcgtGTGTTGTGACTTTTGGTGCGACGACAATGCCACGATGGAGGAGCATCTGCTCAGTGCAGAACATCGTGAAACAGTTGCAATGATTAATGGCTCTGTTCCAATTGTAATACGACGACAACGTTTTTTAATATGCCATACGTGCAATCGACGTTTTCGATATAATTTTCAGTTGCGTTTACACGCGAAAGACACCGGTCATCCAATAAATTTCACTGCCTCAGatgaatatcaaatgaaaattcattgcaaTTTGTGCCCACAAATTCTAAAATCTCAACTAGCATTACAGCGCCATCAATTGACTGTTCACAATAAATCTAAAGAGTTCAAGGAGAAAATACCAATGCcgtatttttgttctttctgCTCCATCAATTTTGAGACTGCGCGTGACGCAGTGTTACATCGAAGAACAGCGAGTCACAAACAGATTGTCAAGAATCGTAAGTTTAGCTCTATTGAGGGGGAAACAGTTTCACCCTTACAAAGGGATTGTGGTCATTGCGGTGAGAAGCAAAGCAATTTACAAGAGTACAGACGGCATTTACTTCAATGTCATTCTGATCAATGTCACAAgTGCCtcaagtgtaaaaaaatttttgcattatcTCAAGATATTGCAcgacatataaaaattgataaatgtataaaaaaattaccgaGAACCGATCAAAAATCTCCGTGCAacaatgataaaagaaaatgtacaaaatgttcattttttacaaaatcacAAGCCGAGTTTATCTTTCACCAAGCTATTCATGAGGGTCCCATTGAGATTGATCCAAAACAAGCGAGCTCAAGTACTTCTGATACTCCTCCTGCTACCGTCACTACTACcaccactactactactaaTGCAAATACAACTACTACAACTACCACAACTATTACTAAAAGTTCTATCAAATATCGATGTCCCATTTGCAACAAAATGTTCACCAAGGGATCATTGCATAATCATATTCGTCGACACACtggggaaaaattattttcatgttgcaACTGTGGTAAATCTTTcgcaaaaaaatcaaatttaaacgAGCATGCAAACGAatgttcatcatcatcatcttcattattactaaaatcaaataatgatgacaaaaataaaacaaaaattcgtcGCCGAAATTTCATCTGTTTAGAATGCAATACAGGATTCTACACAAAAGACAATCTCAGACAGCACATGCTTCGACATACTGGAAAAGATTACAAGTGCGGACTTCCGGGCTGTCCAACTATTCTACGAACTGAGTCTGAACTCAAAGCTCATCGAGCTCTTATCCATGAGAGTGTCGCCGATCTCCGCAAATTTCAATGTGACCAGTGCTCATACGccgcaaaaagaaaaacacaATTACACCGGCATCAAACGCTGCATAAAATTCCATCAAGAAACGAACTATTTTCTTGCACACATAAAGGCTGCAATTTTTCAACTCGATTTAATTCACACTTAAAGCGACATGTTCGCCTACACACTGGAATAAAACCATACGCTTGTCCACACTGCAATTACGCCAGCAATAATATCgaAAATTTAAGAAAGCACGTGCTATCAACATCATTACATTCAggtaaaacaatttatcagTGTGAAAAGTGTAAGAATTACGGTACAAATTTTTCCAAAGAACTGCGTGCTCATTTAATGGAAATACACTCGGAAGAATTTCCAACACCGACCGCTGCCAAGAATTACGTTGCTGGAATCTTTAGTTCACAGTGA
- Protein Sequence
- METNFEDDDDTHYCIKCHMTVNGLDNYVRHRQTGCRPSERKNAVTPDPPTPTVSYPEILNADAFFSSLELQSSAKSKSTGARSGHEEEKKLEKRGDKRKKTRRYNEIDVPSPKEKLMTLPPVVTDLDDPTDHIGIPSLVGFPDIVTFTDKASTSTKIQSSGVPKPSDSDKKRGNDEHQVWSDDDSEDIDENEMTNVEDELESEEDFDYPHDEDTNDSQVDDIDQVDSYSETDEADDREYPPQAHTGGKWKPGQLLQHMIRQNDDDIDHDDDQDNSRPAHTGGKWKPEKINEDELEDDGKDEEIKDNALITRSSSARQPPPGHTHGKWIPGAMTMPSEHGYWCSPCGRKLASKLVYNRHLRSDLHARRSIQEIEGDVKLPRSVGPLLRKKCRSRRQQILAMKRFETKSTIVDNKATKKRRCREKEFVRCEMCHARVRRIQLGKHLLSHYHCRVAGLNPCSPAARRFILENMANVVRQCPFQCSCCRFYCNTEETFLLHWRSNLHSQIQNDDESKYICVCCDFWCDDNATMEEHLLSAEHRETVAMINGSVPIVIRRQRFLICHTCNRRFRYNFQLRLHAKDTGHPINFTASDEYQMKIHCNLCPQILKSQLALQRHQLTVHNKSKEFKEKIPMPYFCSFCSINFETARDAVLHRRTASHKQIVKNRKFSSIEGETVSPLQRDCGHCGEKQSNLQEYRRHLLQCHSDQCHKCLKCKKIFALSQDIARHIKIDKCIKKLPRTDQKSPCNNDKRKCTKCSFFTKSQAEFIFHQAIHEGPIEIDPKQASSSTSDTPPATVTTTTTTTTNANTTTTTTTTITKSSIKYRCPICNKMFTKGSLHNHIRRHTGEKLFSCCNCGKSFAKKSNLNEHANECSSSSSSLLLKSNNDDKNKTKIRRRNFICLECNTGFYTKDNLRQHMLRHTGKDYKCGLPGCPTILRTESELKAHRALIHESVADLRKFQCDQCSYAAKRKTQLHRHQTLHKIPSRNELFSCTHKGCNFSTRFNSHLKRHVRLHTGIKPYACPHCNYASNNIENLRKHVLSTSLHSGKTIYQCEKCKNYGTNFSKELRAHLMEIHSEEFPTPTAAKNYVAGIFSSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01000844;
- 90% Identity
- iTF_01000844;
- 80% Identity
- -