Basic Information

Insect: Microctonus hyperodae
Gene Symbol: zfh1
Assembly: GCA_030347285.1
Location: JAQQBR010000001.1:7648711-7654531[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.18 13 6.2 1.0 2 23 69 91 69 91 0.91

2 7 2.2e-05 0.0016 18.5 0.6 2 23 110 131 109 131 0.97

3 7 5.3e-06 0.00038 20.4 7.8 1 23 140 162 140 162 0.99

4 7 1.3e-05 0.00095 19.2 1.9 1 21 168 188 168 189 0.95

5 7 1.5e-05 0.0011 19.0 3.1 1 23 707 729 707 729 0.95

6 7 2.1e-05 0.0015 18.6 7.3 1 23 735 757 735 757 0.98

7 7 0.0014 0.1 12.8 4.3 1 21 763 783 763 784 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.18	13	6.2	1.0	2	23	69	91	69	91	0.91
2	7	2.2e-05	0.0016	18.5	0.6	2	23	110	131	109	131	0.97
3	7	5.3e-06	0.00038	20.4	7.8	1	23	140	162	140	162	0.99
4	7	1.3e-05	0.00095	19.2	1.9	1	21	168	188	168	189	0.95
5	7	1.5e-05	0.0011	19.0	3.1	1	23	707	729	707	729	0.95
6	7	2.1e-05	0.0015	18.6	7.3	1	23	735	757	735	757	0.98
7	7	0.0014	0.1	12.8	4.3	1	21	763	783	763	784	0.96

Sequence Information

Coding Sequence: ATGCGCAGTCCTTTAGATCTTTCATCGCGGGAAATGCAACGAATGAAACATATCAGTTATAGTGTGGCGCATTTGACGTCAACGTATATTTTGTATGGTCAAAGGTGCAGCGGTGACGAATCCAGCGTGGAATTAGCAGAGATCAGCGGTGGGGCGAGTGTCGGGGGCGGTGGCGGTGAGGGCGGATCGGCTAAACAAGAAGAGAGGTGCCCGCAGTGTGGCATTCTCTGCCGGAACCTTCACGTTCTTCAGCTCCACCTCGAGGACGCCCACAAGACCACATTCGCCATTGATAAGCACGATCTTGGTGCACAATTTTCTCAAGTTtCTTGCAAAGTTTGCAGCAAAACTTTTGCCAACGTTTATCGTTTACAGAGGCACATGATTAGTCACGAAGAGAGCGCGGTATTGCGCAAATTTAAGTGTCCACATTGCGAGAAGGCATTTAAATTCAAGCACCATCTCAAgGAACATCTTCGCATTCACAGTGGAGAAAAGCCATTTCAATGCAACAATTGTGGCAAACGTTTTTCACATTCTGGCTCATACTCGAGCCACATGACATCGAAAAAGTGCCTGatagtgaatttaaaaaaatcacgaCAAAGTACGATGTGTGGTGTTGATCGAGCTGCAAAAAAATCTCAAGTTCAACAGCAATCACAATCATTACCATCACGTGGGCGTGATGTTGATATTCTTGCcgctaataataatacttttctGCCAATTTTACCAAAACTCTCGCCCTCGGATTATCAAGATCTTCAACGTGATAGCGCAAGCATATATGATATGCCAACATTACTACCACCAATGGTGAATTTTAGcagtttatttttacaatcgtCAATTggcaaattattaaatcaattgcaaACAAAGCGAATGGATGAAGTCGCGGAGCATTTTGAAACACATCGCGAGACAATGAGTCCATCCACCGCTGACTCTGAAGAGACTGAAGGGAATGAGGGAAGATATTCGCCAGCATCAAATGATCCTCAGGGCATGGATGTCGTACGACGTATCTTAGAAACTGTAAATACATCAGTGACAAAACAATTGCTCGAGGCAAATGTACGTAAATTGGCATCATCACCAGAGACAATAAAGCGCGAATATGATGAGGATTATCATGATCAAGACAGTGAATTGTCTGGTGAAATGACACCCTATCAAGACTGGCAAGTGGGTGATCAATATGATTCACAGAGTGAAGGTCTTGCGGCAAAACTCGAGGACGCAAGTCAATCAAGCGCGAAAGATCGACGTGGCtataaacgaaaaattgaTCAATATAGTGGTGTAGGACCAGAGAGTTCAGTTGAAGCTGACTCAGATGACGATGAAGAGTCCAATAAAATGCAAAGTGATACAGGACGACGTGTTCGTGCAAGATCGCTCATTGACGATGAACAATTGGCTGTTCTTAAAGGCTATTATGCAATAAATCCACGACCAAAGAAAGAGGAAATTGTTATGAttgcaaattatattaaatttcccaCGCGTGTTGTACAAGTTTGGTTTCAAAATTCACGAGCGAGAGATCGTCGTGAATCACGTATTCCTGCACTCGTTCCATTATCATCCATTGGGAATCATCAAATGCCACTAGAACAGCCTTTGGATTTATCCAAGAaagatgtattaattatatcgcCATTGATAAAAGAGAATGATATGCTGAGAAATGTTGTGTCACCCCACGCgccaattaatgaaaataatgttcaGATAACTGCCGTATCCAATACTGAAACTGATGATCCTGAGGAATTACCTTTGATTATTGACGAAGAAAGTACTATTGCTCCCGCTGCTGTTCCTGCTGCTCTTGCTGCTTCAACCACCCTTATTACTGCTACTACTACTTCTACCATTACCATTTCTTCTACCAACACTACCACCacaactactactactactactactaatCTTGGTTGTTGTGCTGTTACTACTGAgtctgaaatgaaaaaatttgcatCATCTGTAGCGAATGATTTCACTGGCGTAAAGAGTCAAACTAAAAATCATGCAAAGGCAGAGCGCGAGAATGATAGGCCCGTGTCCACGGATGCTCCTCCTACGACGGAAACGGAGCAAGAAGGCGTGTACGTGTGCGATCAATGCGATAAAACATTCTCCAAGCATAGCTCACTTGCCAGACACAAATACGAACATTCCGGACAAAGGCCGTATAAGTGTGAGGAATGTCCTCGTGCCTTCAAGCACAAGCATCATCTAACGGAACATAAGCGTCTTCATACTGGCGAAAAGCCATTCCAGTGCTCCAAGTGCCTAAAGCGCTTTTCACACTCTGGTTCATATAGCCAACATATGAATCATCGTTACTCCTACTGCAAGCCATATAGAGAATAG
Protein Sequence: MRSPLDLSSREMQRMKHISYSVAHLTSTYILYGQRCSGDESSVELAEISGGASVGGGGGEGGSAKQEERCPQCGILCRNLHVLQLHLEDAHKTTFAIDKHDLGAQFSQVSCKVCSKTFANVYRLQRHMISHEESAVLRKFKCPHCEKAFKFKHHLKEHLRIHSGEKPFQCNNCGKRFSHSGSYSSHMTSKKCLIVNLKKSRQSTMCGVDRAAKKSQVQQQSQSLPSRGRDVDILAANNNTFLPILPKLSPSDYQDLQRDSASIYDMPTLLPPMVNFSSLFLQSSIGKLLNQLQTKRMDEVAEHFETHRETMSPSTADSEETEGNEGRYSPASNDPQGMDVVRRILETVNTSVTKQLLEANVRKLASSPETIKREYDEDYHDQDSELSGEMTPYQDWQVGDQYDSQSEGLAAKLEDASQSSAKDRRGYKRKIDQYSGVGPESSVEADSDDDEESNKMQSDTGRRVRARSLIDDEQLAVLKGYYAINPRPKKEEIVMIANYIKFPTRVVQVWFQNSRARDRRESRIPALVPLSSIGNHQMPLEQPLDLSKKDVLIISPLIKENDMLRNVVSPHAPINENNVQITAVSNTETDDPEELPLIIDEESTIAPAAVPAALAASTTLITATTTSTITISSTNTTTTTTTTTTTNLGCCAVTTESEMKKFASSVANDFTGVKSQTKNHAKAERENDRPVSTDAPPTTETEQEGVYVCDQCDKTFSKHSSLARHKYEHSGQRPYKCEECPRAFKHKHHLTEHKRLHTGEKPFQCSKCLKRFSHSGSYSQHMNHRYSYCKPYRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01001975;
90% Identity: iTF_01001646;
80% Identity: iTF_01001975;