Mhyp008256.1
Basic Information
- Insect
- Microctonus hyperodae
- Gene Symbol
- -
- Assembly
- GCA_030347285.1
- Location
- JAQQBR010001832.1:1217461-1222380[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.01 0.75 10.1 0.1 2 20 13 31 13 33 0.92 2 22 8.9e-05 0.0065 16.6 2.6 2 23 40 62 39 62 0.96 3 22 0.35 25 5.3 10.0 1 23 72 95 72 95 0.93 4 22 8.9 6.5e+02 0.8 0.2 5 17 404 416 403 420 0.85 5 22 0.7 50 4.3 0.2 3 23 431 451 430 451 0.94 6 22 0.89 64 4.0 1.8 1 19 478 496 478 499 0.79 7 22 0.00051 0.037 14.2 1.3 1 22 569 590 569 590 0.96 8 22 3.8e-05 0.0027 17.7 0.1 2 23 600 622 600 622 0.97 9 22 0.019 1.4 9.3 2.1 2 23 632 654 631 654 0.94 10 22 0.13 9.6 6.6 0.5 2 19 675 692 674 695 0.91 11 22 0.024 1.7 8.9 0.3 2 23 703 725 702 725 0.95 12 22 0.012 0.84 9.9 4.2 1 23 736 759 736 759 0.94 13 22 0.00038 0.028 14.6 0.3 1 21 785 805 785 806 0.95 14 22 0.059 4.3 7.7 1.0 1 23 813 836 813 836 0.92 15 22 1 75 3.8 3.8 2 23 846 868 845 868 0.95 16 22 0.033 2.4 8.5 0.3 1 19 933 951 933 954 0.94 17 22 0.063 4.6 7.6 3.3 3 19 1038 1054 1037 1056 0.95 18 22 0.0003 0.021 14.9 3.7 1 23 1064 1086 1064 1086 0.99 19 22 0.53 39 4.7 2.6 1 21 1099 1119 1099 1122 0.84 20 22 0.0031 0.23 11.7 0.2 3 23 1310 1331 1309 1331 0.95 21 22 0.028 2 8.7 0.6 2 23 1422 1444 1421 1444 0.91 22 22 0.004 0.29 11.4 0.7 2 23 1482 1504 1481 1504 0.95
Sequence Information
- Coding Sequence
- ATGAGATTGCGCACACGTACTCGATCGAACATTGCAGAATGTGACATTTGTTATGTAAGATTTAGCGATCAAGCAGCATTAAGGGTACATAAAAGCCGTTATAATAAGGTTAATTTAGTATGTCACATTTGTAAATTATCTTTCATTACACCGATACATTTAACATCTCATCGACGATCATCACATCGCGGTGTTGATTGGCGATgttacatatatgaatgtcATTATTGTAAACTTGGTTTTCGAAAGAAACACGTTTTACAACAACATATCTTCCATTGtcacaatataaatgaatttttcattaataaacgATCTCGTCGATCAAAAAATCGTTCTATTAAACATACGAGAACTTCATTGAATTCAAAATCACGTAATTTACAacggaataaaagaaaatgtatCTCACCGATAATAACAACTGATTCACCAAAAAAATTAGCGATGAGTTtgaaatcaaatgaaattaatttgcagtgtaaagaaaataataatcaatttaataacgaTAAACATACGAATGATGTAGCGGTATTACAACAATCATCATCGATTTCAAATAgtcaaaatgatattaataaatcattgaattcaTCAACATTGTTATTTAATCCGCCGTTAGTTAAAATTTGTGCGGTGCCGAATGAGGTTGAGactttattaaatgattgtgATGATACTGATGACAGTTTAAGTGACATCAGTAATAGCAGCGATGAtagtaatttttcttcaatgacTGATGTTTGTATAGATGATTATTTACCGAAAAAATATAGTTTACGTTCGAgaacatcaaataatttttcatatgatgAAATACCAAATCGTTCGATGCAACGAAAATGGGCAATATTACGAAAACGTTTTGATTGTCGTGATTGCCGAGttgaattgaagaaattaagtcttccattattgaataattatgaattatcaaataaacaaatggatTATACAAACACCAAAAATAATGAGactattcaaattaattctagACCAACAGTTggaatggaattaaaaaatcttgatttagctttaaaaaaattacaagatgCACATCATAAAcaagatgaaatattaaacaataatgattcatataatttatcaggAGATTCACAGGAATTAAGtgaatctataaatattgaaaattcttcatcatctaTTGATGATGTTATAACAAATAAAGTTGTTTATATGTCAAGTTTATGTCAAACTCGATTtacaacaaagaaaaaattaatttttcattatttatgctTCCATACAAATCCACGTTATCAAGATTGCGCTGTTTGTCGATCGCAATACACAAACATAAGTGAATTAACTGATCATTTATCCGATCACTGCATTGAAATACCAGAATCACTAAATGAAAAATCGCCACTTGATCCAAAAGGTCCATGCGaaaattgtaaagaaaaatatacgtgTAAAGgttgtaaaatgaaattttggtTAGTGTCACACTTACGAGAACATGAACAGCATTGTTCATTGGCAAGTCAATTAAGAATGaatcattcatttaataatattcatattaatgaagaaattgttATCAATAAACCATCggtaagtaataattatacagaGATAAAACAAACTGATGTCGCTGTTGATTCCGAAACAAAACCATTCGAATTTATCGTTGAtccatcatttaaaaaatattattcaaaacctggtgaacaattatttacatgtaaattTTGTCGTTCATCATTTAAAACCATTTCGAATCTTGAGGAACATATAAGAAAATTTTCGTTACGTGGAAGGAGAAGTAATTATTGTAATCGTTGCGGTACACCATTTCCTTCTCCTTCATTATTAAGTGCACACACAAGAACAGCACATTTACCAGAATCGTcaacatataaaattcattgcagCATTTGTCAGCAAGGATTTAATGCAAACAGAACATTACGAGAGCATATGATGCATATTCATCGTGAAGAATTAGAAAAACATGTTGATGATGAACCAAAAGTAATATGGAATCTTGAAAAAACTTGTAGCATatgtaaaacaatattttctgATCGTAAACGATTTATCGAACATTCTATGTATTATTACgacgatgaaataattgaatgcaGTATGTGCGGTGAAGAATTTTCAGGACGATATAAGGCACATGCTCATACAAAAATCGTTCATTATTCGATAGAAATGCGACAGAGTTATACATATTGTTGCAATATTTGTCTCGAGGGTTTTGTTTATCCATcgcatttatattctcatatgTATCATGTTCATAATACTGACATTCAACATGAACAAAGTACACACGTTAATGGAAACAAACATGATAATAATCAGCATGGACTGTTTTATATGTGCCGAATTTGTCACCAAACGTTTGATACACCCACGTTGTTGACTGATCATCAAATGGAATATTCAAATACTGGCGATTTTAGTTGTTCAAAATGTCAGCGAAAATTCCTCACAAATTTATTGTTAGAAAGACATGTTGAATTAAGTCACTCTGGTCAGACTCATGTTAATCAAATTGAATGCCATTCAtgtcatgaaattttatattctaaatcATCATGGCTGGCTCATTTGaaacattttcatattaattctaATACTGATAATCGTCCGCCTGAAATGTGGCCAAGCAACGATTTTTCTTCGGATAAATCAATGGAACATTCGTATGTTACTCCGTTGTCTGTTGATAATTCGACAaatgcaaatgaaattaataaaaatgttgatacTGTTATTAATGAAGTTTCCAGTTTGTCTAATCAGATGCAAATTGAATATACGTGTGCGTTATgtgatatgaaatttttaaatagttcAGAATTGAAAACTCATTCACTTAAATATGGTAATACTTGTGTTAGTAATAccgaaatgaataatttttcaattgccagtatttattctgttgaattagaagattatgaaaatttgtCCGATGCTAAAaatgatggtaataataaaattaaaaacaatgaagagaataaaatagttGAAGTTAAAAATACGGAAGAAAACGAGaagaacaatgaaaataatcttgatgaaatgaataaaatttcagatgaaaaacaattaaataataaagttttttgTCAACAATGTCATTTAGATTTTTCACATCGTAGCTCACTTAGTAAACATGAAactttatattcaaatgaaggtgattataaatgtaatatttgtcaacggaaatttaaatttattggagATTATCAAACTCATTATAGAAAACATGAAAATCGACAGAGGGATACAATTGATATACCACCATATTATTGCAAAACATGcgatgaaaaatttgtttctgaAAGATCTAAATATGCTCATTTTGCTCATATGCatggtatatttttaaaattactccCATCATCAAATGTAACACGACGCTCATCACCGCGACAATCAAAGCCACAGCTTCAGATgagtttatattcatttttttcacgtAATTCAAAAGCTGAAGAATCGAAAGaatcaaataattctaatCCGGAAACACATGCTGATATTATCCGAGATAAAAAAGTGTTGAATGAAGAGttagaaatgaatataaatccaaaaacaatttcaaatccGATTGTCCAACAAAATTCTtcagaaaatattcataaaaataaatctacaatatttgataattcagAGGGAATTCGAAATTTATCAGTTATACCTGTTGTACTTCCATCGAATTTGTTTGAAGAGCCAACGAAAATTGTAGGGATTAATAAACTAgttatgaaagaaaatgaaattgtaattgttaatggaaatgaaaatgaaattgtggatgttgaaaatgaattcgttgaaattgaagaaataaataaagataaagaaattataattgatgatgaaattacTGAATTGGAAAATGAATCTGCGAATAAAAATACGTCAGAATTATGTGACGTTTGTGGAGATGCATTTACAAATAGACAAGACTTGATTAATCATCAAAAAGATTctcataatattgaaataattgcagAATCACAAAATGATattcaatgtgaatttattgatatcgAATCAATAATTGAGGATGAACatgaaagtgaaaataataatttgccaacagattttgataatgatgacattaatatcatttttgatAGTACTCGAACTAGCAATGATGTTGTTGatgttaatgataatgataatggtaaggcagttaataaaaaatctgcAATTGTTCATCCAATAAAACCAGGAAAAACTTATTTGAGAAAAACTCGATTGGAATGTAAAATTTGTCATATGAAAttcgttaatttaaataaattagggGAACATTTAGAAGAACAACATCAAACAGATTCACCATCTGAAgttgataatattcaaaatccaCGAGTGTCAAGTTcaagtaaatttttaaatgacacacaaattcaaattgattttCGTAATGTACAAATGTCTTGTCAATTTTGTTCTAAACAATTTTCAAACGATCAATATTTACTtgcacatataaaaaatattcattcaacatCAATTAACGTGAAAgcatctaataaaaataataaaattgttataggTCATCAGGAAAAAtcgaatataatattgaatgaagatAATTCGATACAGgaaactttaattaaaattgatgatgtTCAACATCATTTGcatgatatgaaaataattaattatacaaaagatTCAACATTACCGATTGGGAAAAATCTtgatgttattaaaaaatctaaTGACGGAATAAttttacgaaaaataatattgaaacaagATTTAGATACAACACAAAATTCGATTATATCAGGTCCTACAAGATTTCCTCGATTAGTTCCACTTCCAAGGAATACACTTATTATACCGTTTAATCGacaattatcacaaaaaataaatcaacagaaCAATAATGATGTACCACGATAA
- Protein Sequence
- MRLRTRTRSNIAECDICYVRFSDQAALRVHKSRYNKVNLVCHICKLSFITPIHLTSHRRSSHRGVDWRCYIYECHYCKLGFRKKHVLQQHIFHCHNINEFFINKRSRRSKNRSIKHTRTSLNSKSRNLQRNKRKCISPIITTDSPKKLAMSLKSNEINLQCKENNNQFNNDKHTNDVAVLQQSSSISNSQNDINKSLNSSTLLFNPPLVKICAVPNEVETLLNDCDDTDDSLSDISNSSDDSNFSSMTDVCIDDYLPKKYSLRSRTSNNFSYDEIPNRSMQRKWAILRKRFDCRDCRVELKKLSLPLLNNYELSNKQMDYTNTKNNETIQINSRPTVGMELKNLDLALKKLQDAHHKQDEILNNNDSYNLSGDSQELSESINIENSSSSIDDVITNKVVYMSSLCQTRFTTKKKLIFHYLCFHTNPRYQDCAVCRSQYTNISELTDHLSDHCIEIPESLNEKSPLDPKGPCENCKEKYTCKGCKMKFWLVSHLREHEQHCSLASQLRMNHSFNNIHINEEIVINKPSVSNNYTEIKQTDVAVDSETKPFEFIVDPSFKKYYSKPGEQLFTCKFCRSSFKTISNLEEHIRKFSLRGRRSNYCNRCGTPFPSPSLLSAHTRTAHLPESSTYKIHCSICQQGFNANRTLREHMMHIHREELEKHVDDEPKVIWNLEKTCSICKTIFSDRKRFIEHSMYYYDDEIIECSMCGEEFSGRYKAHAHTKIVHYSIEMRQSYTYCCNICLEGFVYPSHLYSHMYHVHNTDIQHEQSTHVNGNKHDNNQHGLFYMCRICHQTFDTPTLLTDHQMEYSNTGDFSCSKCQRKFLTNLLLERHVELSHSGQTHVNQIECHSCHEILYSKSSWLAHLKHFHINSNTDNRPPEMWPSNDFSSDKSMEHSYVTPLSVDNSTNANEINKNVDTVINEVSSLSNQMQIEYTCALCDMKFLNSSELKTHSLKYGNTCVSNTEMNNFSIASIYSVELEDYENLSDAKNDGNNKIKNNEENKIVEVKNTEENEKNNENNLDEMNKISDEKQLNNKVFCQQCHLDFSHRSSLSKHETLYSNEGDYKCNICQRKFKFIGDYQTHYRKHENRQRDTIDIPPYYCKTCDEKFVSERSKYAHFAHMHGIFLKLLPSSNVTRRSSPRQSKPQLQMSLYSFFSRNSKAEESKESNNSNPETHADIIRDKKVLNEELEMNINPKTISNPIVQQNSSENIHKNKSTIFDNSEGIRNLSVIPVVLPSNLFEEPTKIVGINKLVMKENEIVIVNGNENEIVDVENEFVEIEEINKDKEIIIDDEITELENESANKNTSELCDVCGDAFTNRQDLINHQKDSHNIEIIAESQNDIQCEFIDIESIIEDEHESENNNLPTDFDNDDINIIFDSTRTSNDVVDVNDNDNGKAVNKKSAIVHPIKPGKTYLRKTRLECKICHMKFVNLNKLGEHLEEQHQTDSPSEVDNIQNPRVSSSSKFLNDTQIQIDFRNVQMSCQFCSKQFSNDQYLLAHIKNIHSTSINVKASNKNNKIVIGHQEKSNIILNEDNSIQETLIKIDDVQHHLHDMKIINYTKDSTLPIGKNLDVIKKSNDGIILRKIILKQDLDTTQNSIISGPTRFPRLVPLPRNTLIIPFNRQLSQKINQQNNNDVPR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -