Basic Information

Insect: Microctonus hyperodae
Gene Symbol: -
Assembly: GCA_030347285.1
Location: JAQQBR010001833.1:6711890-6714121[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0014 0.099 12.8 0.6 1 23 341 364 341 364 0.96

2 10 3.9e-06 0.00028 20.8 0.5 1 23 370 392 370 392 0.99

3 10 4e-07 2.9e-05 24.0 1.2 1 23 398 420 398 420 0.99

4 10 0.036 2.6 8.4 3.9 1 23 426 448 426 448 0.98

5 10 5.2e-06 0.00038 20.4 0.3 1 20 454 473 454 474 0.96

6 10 0.027 2 8.7 2.4 1 23 483 503 483 503 0.94

7 10 1.2e-06 8.6e-05 22.5 0.5 3 23 511 531 510 531 0.98

8 10 0.00012 0.0086 16.2 1.4 1 23 537 559 537 559 0.98

9 10 0.0011 0.082 13.1 3.4 1 21 565 585 565 588 0.96

10 10 0.1 7.4 6.9 3.1 1 22 594 615 594 615 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0014	0.099	12.8	0.6	1	23	341	364	341	364	0.96
2	10	3.9e-06	0.00028	20.8	0.5	1	23	370	392	370	392	0.99
3	10	4e-07	2.9e-05	24.0	1.2	1	23	398	420	398	420	0.99
4	10	0.036	2.6	8.4	3.9	1	23	426	448	426	448	0.98
5	10	5.2e-06	0.00038	20.4	0.3	1	20	454	473	454	474	0.96
6	10	0.027	2	8.7	2.4	1	23	483	503	483	503	0.94
7	10	1.2e-06	8.6e-05	22.5	0.5	3	23	511	531	510	531	0.98
8	10	0.00012	0.0086	16.2	1.4	1	23	537	559	537	559	0.98
9	10	0.0011	0.082	13.1	3.4	1	21	565	585	565	588	0.96
10	10	0.1	7.4	6.9	3.1	1	22	594	615	594	615	0.94

Sequence Information

Coding Sequence: ATGACAAATACAGAGCAAAGTATATTGAGCCAAATTAATGGTAGTGAACAATTACCTGAGGAAATTCAATTGACAGAACTTTTGCCAGTGGAGCAGTCGCGTATTAAAGAAACACGAGATGATAAAGATCCAGGCACCACTGATGGTCTCAAATTACTTCGGAGCTTTACCCAAGATAATCAAGATGAATTTGATAcgcaaaatttcaaattatttcgtaAAATTGACAATCACGGTAGTAATTGCAATACCAAAAAACGAGTTAAATTAAAGAGGGGACGCAATGAAAAGTGGAAAGATATGAGTgataatgaagataatgaaCAATCAGAAGAAGAAGTTAATATAagagtaatgaaaaataatagaaaagttAAAGGTGGTTCAAAGAAAAAAGCTTTAAATTCGTCATgggataatgaaaaattttctgatgAACATGAGAACACTGCTGCGAtgccaaataataaaaattctaaacgaCAAAATAGAAATCgacgaaaaattaatgataaagatTATCTTAATGATGAAGTATATTATTATCGTCAGCAATATGATCAAACATCAGGAATTGAtagtgatgaaaatgaaactaATATAGAGACATTAAAAGACAATGTATTTAAAGATatggcaaataatttttttggtgCCAATGCGTCTACAGAATCGattgaaacaattgaaaagcgttcaacaaaagaaaaaaatgataaacaattACCTGTGAGTGATCGTgttaatgacaataaattcCCGTCAGAAAACGAAACTAACGATAATGATTTACAATTGGAAATCGGCCATATTATCAAATCAAATTATCTTTTGGAACAAGATAACAATAATTCAGTGGAATGTGAAAGTAATCAATCTGAAAATTTACAACAATCATCGCCAGACCAAGCTCATTCAGCTCAATTATCAGAAACAATTTCCAccgataaattatcaaagaataaaaataaaaaatctcgcAATGAATACTCTcgtacaaaaaataatgaattaaaaaaatattgttgtttaATGTGTGATGCAAAATTCAAAGGAAGTGGAGGTTTAAGAAATCATTGGAAAGTTGTTCATGCCACTGGACCATCATTTAAATGTGATGACTGTGGCAAAGAGTTTCCCCTTAAAGAACGTTTGAAACTTCATGTGAGAACACATACGGGTTTCAAGCCATATAAATGTACAGAGTGCGATAAAACATTTGCACGCGGCGGTCAGCTATCACAGCACAGACGTACACACAGTCATGTAAAACCCTATCACTGCTCACTTTGCTCCGGTACATTTACATGTTCAGCAAATCTTGCATTGCATATGAAACGCCACAATGGTCAAAAGGATCACAAATGCGAGATTTGTGGACGTGAATTCATTCGAAGAGatgcattaaaaaaacatttagaaTGTTTACATAAAGATGTTAAATCATTTCTCTGTGTTATTtgcaataaaacatttaaaggACATTTACCACAGCATATGAGAACACATTGTCAAGAACGTCCGCATGGTTGTGCAACGTGTGGCCAAAGATTTGCacaaaaatcacaattaacaGTTCATCAAAGAACCCATAGTGGTCAAAGACCATTTCGTTGCCTAGTTTGTTGGCAGGCATTTGCTCATTCTACTGCATTGAAACTTCATACACGACGACACACTGGCGAAAGACCCTTCAAGTGCACCGAGTGCAATGCTGGCTTCACTCAATTACCTCACTGGAAAAAACATATGAAATGTATTCACGGTAGATCGAAGCCATATTGttgtaaaaattgtaatagcttttttcgtattaaaaatgatttagaaaatcatgaaaaaacgTGTCTTGACACGGAtacaattgatgaaaatgGAGATTCAATGGGCGAATCGTCGTCGAAAAATGAAATGGCTGATGCAAATACATTTAGAATAATGAGTGTGGAGAAAATGCGATTGTTGCTGGCGGTTTTACTGAAAAGGATCTCAAAGCCTTTGAGATTGGTTGAGCTTGGTTTTGGAAAGAGGttgattgatgaaatattacagGATTCACTGGTATCTGCTGGCAAAGAACCAGCCAAAATCGGTGAGCTCACTGAGCTTGAGACGCTTCGCAAGAATCTCAAGATGTTTCTCGAGTGGACAGTCCCCAAAGAGCACTGGGAGGCATTCAAGAAGATGAATAAGAGTCCGGAGGAGATACTTGAGACCCTTACCGCCACATAG
Protein Sequence: MTNTEQSILSQINGSEQLPEEIQLTELLPVEQSRIKETRDDKDPGTTDGLKLLRSFTQDNQDEFDTQNFKLFRKIDNHGSNCNTKKRVKLKRGRNEKWKDMSDNEDNEQSEEEVNIRVMKNNRKVKGGSKKKALNSSWDNEKFSDEHENTAAMPNNKNSKRQNRNRRKINDKDYLNDEVYYYRQQYDQTSGIDSDENETNIETLKDNVFKDMANNFFGANASTESIETIEKRSTKEKNDKQLPVSDRVNDNKFPSENETNDNDLQLEIGHIIKSNYLLEQDNNNSVECESNQSENLQQSSPDQAHSAQLSETISTDKLSKNKNKKSRNEYSRTKNNELKKYCCLMCDAKFKGSGGLRNHWKVVHATGPSFKCDDCGKEFPLKERLKLHVRTHTGFKPYKCTECDKTFARGGQLSQHRRTHSHVKPYHCSLCSGTFTCSANLALHMKRHNGQKDHKCEICGREFIRRDALKKHLECLHKDVKSFLCVICNKTFKGHLPQHMRTHCQERPHGCATCGQRFAQKSQLTVHQRTHSGQRPFRCLVCWQAFAHSTALKLHTRRHTGERPFKCTECNAGFTQLPHWKKHMKCIHGRSKPYCCKNCNSFFRIKNDLENHEKTCLDTDTIDENGDSMGESSSKNEMADANTFRIMSVEKMRLLLAVLLKRISKPLRLVELGFGKRLIDEILQDSLVSAGKEPAKIGELTELETLRKNLKMFLEWTVPKEHWEAFKKMNKSPEEILETLTAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01001611;
90% Identity: iTF_01001611;
80% Identity: -