Basic Information

Insect: Microctonus hyperodae
Gene Symbol: gtf3a
Assembly: GCA_030347285.1
Location: JAQQBR010000002.1:11110714-11114877[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.9e-05 0.0035 17.4 0.4 1 23 646 668 646 668 0.97

2 17 0.1 7.5 6.9 0.2 1 19 674 692 674 695 0.91

3 17 0.49 36 4.8 1.3 2 23 701 722 700 722 0.95

4 17 3.8e-05 0.0028 17.7 1.2 3 23 731 752 730 752 0.98

5 17 0.0036 0.26 11.5 1.7 1 23 759 782 759 782 0.93

6 17 7.8e-05 0.0056 16.8 0.7 1 23 788 811 788 811 0.94

7 17 0.53 38 4.7 0.9 2 23 819 839 819 839 0.94

8 17 1.6e-07 1.2e-05 25.2 2.3 2 23 845 866 844 866 0.97

9 17 6.1e-06 0.00044 20.2 0.8 1 23 872 894 872 894 0.98

10 17 0.0035 0.26 11.5 2.8 2 23 906 928 905 928 0.95

11 17 0.37 27 5.2 2.6 1 23 934 957 934 957 0.92

12 17 0.0013 0.095 12.9 2.6 2 23 979 1001 978 1001 0.95

13 17 0.00033 0.024 14.8 0.5 2 23 1008 1030 1007 1030 0.96

14 17 3.3e-05 0.0024 17.9 1.7 2 23 1038 1059 1037 1059 0.97

15 17 0.00099 0.072 13.3 2.3 1 23 1065 1088 1065 1088 0.96

16 17 1.5 1.1e+02 3.2 3.5 2 23 1095 1116 1094 1116 0.96

17 17 0.19 14 6.1 2.0 1 23 1122 1144 1122 1144 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.9e-05	0.0035	17.4	0.4	1	23	646	668	646	668	0.97
2	17	0.1	7.5	6.9	0.2	1	19	674	692	674	695	0.91
3	17	0.49	36	4.8	1.3	2	23	701	722	700	722	0.95
4	17	3.8e-05	0.0028	17.7	1.2	3	23	731	752	730	752	0.98
5	17	0.0036	0.26	11.5	1.7	1	23	759	782	759	782	0.93
6	17	7.8e-05	0.0056	16.8	0.7	1	23	788	811	788	811	0.94
7	17	0.53	38	4.7	0.9	2	23	819	839	819	839	0.94
8	17	1.6e-07	1.2e-05	25.2	2.3	2	23	845	866	844	866	0.97
9	17	6.1e-06	0.00044	20.2	0.8	1	23	872	894	872	894	0.98
10	17	0.0035	0.26	11.5	2.8	2	23	906	928	905	928	0.95
11	17	0.37	27	5.2	2.6	1	23	934	957	934	957	0.92
12	17	0.0013	0.095	12.9	2.6	2	23	979	1001	978	1001	0.95
13	17	0.00033	0.024	14.8	0.5	2	23	1008	1030	1007	1030	0.96
14	17	3.3e-05	0.0024	17.9	1.7	2	23	1038	1059	1037	1059	0.97
15	17	0.00099	0.072	13.3	2.3	1	23	1065	1088	1065	1088	0.96
16	17	1.5	1.1e+02	3.2	3.5	2	23	1095	1116	1094	1116	0.96
17	17	0.19	14	6.1	2.0	1	23	1122	1144	1122	1144	0.95

Sequence Information

Coding Sequence: atggaaAGTAAAACACCAAAATTAATTGATCCTAGAGAAAAGTTGAGCAGCTATTGTCGCACGTGCGCTGGATTAAAAATACCTTTGATAGATATATTCAGTGATAGAGGTATTCAAATGCGTTTGAATCAACAGATGAaacatttagagaatataaatcAGCACGATAGTTTATCAACACAAATGTGTATGGATTGTATATGCGATTTGAAAATGAGCTATAAGTTTTTTATGCAAATTAAAAAAGctgaagtaaaattaaaatcaattcataCATCATTAAGCACGGTGATATCTACCCGTGCACTAGAAAATCagcataatataatacatgacAATAATTTAACTTGTTCCGATAAATCTAATAATACATGGAGAAATCCAACTGAAATAAATCTACAGGAATCATTTCCACTGGGATTAATTCACACTGGATCTACTGATATAGTTAGTCAcaatgtgataataaaatcgaATATTAAACCAGTGAGTAATTATGAAAGCATGAAaactgatgatgatgttgataataataatgatgatgatgatgatgatgatgatgtgcaGTCGATTGAAGAATTTGATCCAGAAGATCATGCTCTTGAATCAGGCGATTACGGAAACACCAAAACAGAATCTAAAGCtgaaaacattattaaaaaggATGATGACTCAGAAATGCAATTAAGTAATCATAAAGCCACTATAATGAGTTACTCAAATAATGTAAACGAGATGAATAATAGTATTATGGaaaataagataataaatgaGACGTTGTATGATAATGTGAAAGAAGTTAATGGTGATGTTAAAATAGAGCTTGAAAATGTGATATTTGATACATGCTTGgaatcatcatcaataagtGGTAGAGGGGATATTACCAGGGAGAATAATAAGCAACCTAatatattgaagagaaaacCATCGTGGCACGGTAAAACTGGAAATTTCATTAGTACGAACACAGATTCAATAGGCAAAGAAGCCAAAATTCATAAACTAAATACTGTGAATATCTCACCATCAGATGAAGAAGGAATAATGTATGTGACTGTTAAAGGTTCGAAACCAAATGAGTTACTTCtagtaaaagtaaaaaaaatggataaatcagccgaaaaaaaagatgataagagttcaattaaaaaattgattgatgttAAACCCACGGAAAAGAGTTTGAAAACGTTGCCACTGAAGGATATATTTACTGATCgttcaaaaaaattagaaaatcgTGAAGCAATTATTGAAGAACAAATTGAACAATACAAGAAAAAACGTGAAAAAGTCCTTGGTGGTGGTAATAGTGGCAGTAGTGGTGCTGATATTGCCGCTACAAATGTTGTTAGTACTACTACCTTTATGCCAAGTGTAGCTGAAACAGACGAATTCGCTGATAGAACCTTACACTTAATTAATTTCGGTAACAATTTGAAGCAGAATTTATCGATTGAAAATTCGATGCTATTGAAAGATGAATCAACGAACTGCGTTTGTGAACAAAAAGAtaatatcgaaataaaaaataactttcaagtaaatgatgaaaatgaaatcgaaatttttaaacaaagtAAAGTACACAATAGTGAACATGAAAATACCAAAGAGTATTTAGCTCGACTGATGAACATCAAACAAAAATGGGAAGAGGCCAaatcaaaaaaagaattattgcaAAAAGAACTTGATCATTCATATACAGAAGGGAATCTcgaaaaattatcgaaaatattaggtgaaaaggagaaaaatttaaaagaatttcAGGATTATCTCAAGCAAAGAAAAATCGTTATTACTCGATTAAAGGATCAggatataatatcattatatgAAGATCGTAATATTACATCAATGCATAATAAATTACcagatttaattgatgaaaatccATCAATATATAGTTTAGATGATAATAATCTTTTTGACTGTGATTATTgtccacaaatatttttcactcgtAGCGCTCTTGAGGATCATTTGAAAAGCCATgactacaaaatattttatttttgtgaggATTGCGGTAGTGaatttccaaataataaaacaagacGAGCTCATAATATCACGTGTATAAAAAAactaatatgtaaatattgtgATTTCATGTTAGAATCAAAAGGAAAGAAACGTCAACATGAACAAAAACATTGTGATACCATTTTTGGTCAGCTTTGCGATATATGCGGCGaaaaatttaaacatcaaGGTACTTTAGATCAGCATATAAAAACCCAACATATGAGCTGGGAAAAAGTATATCAATGTCCAAAATGTCCAAAAAAATTcgcatttaaacaaaaattaagtTTTCATGTAAAATCAGTTCATACAACATTACGAGCTTATCTATGTGAAGATTGTGGTGCTGATTTCAAAAATCCAGCGTCACTCAGACATCACCGAATAAGAAAACATCAGCCAACTAGTAATAAACGCGAATGTCCAGTTTGTCACAAGCTTGTTCCATTTTATAGTTTGTCGAAGCACATGTATACCCATAAAGCATACACAATACAATGTCCTCATTGTGATAAAATGTTCAAAAATACATCAACTTTAAAGCAACATATAAGAATACATGAAGACCAGCGACAACATCGTTGCGATACTTGTGGTGTAGGCTTCAATCGCCGTGATGGACTTCGCTTACACATGAGAGTTCACCAAAAATCTGATAGTCGTGCACTTAAAGAGTGTTCATGTCAAATATGCTcagaaaaatttccaaatcatTCGATGCTTGTAATTCATCGAAATAGAGTACACAAGGACGGTAAACAGTATACTTGTCATATATGCAATAGATCAATGCTGTCAACCCGATCTTTAGAGTGGCACATGTCACACATTCATAATGAAACGCCAACGGGAGTTACACTGGACGACTCAGCGAATGCAATTCATATGAAAAGAGTATCATGTAACCATTgtgataaaacatttaaaacaGAGATGATTTTACGtacacatattaaaaatacccatatggaaaaaaatccaGTTAAATGTTTGGATTGTGATTTAATGTTTACGTCAGAAGTTCGATTAAGACATCATATGATGATTGCTCATAATCGATTAGAAGGGACATTAACATGTCCTCATTGTCCCAAGCGTTTTGTTAATCAATTGCGACTCAAAACTCACATGATTTCACATTCTGAAGAGCGGCCTTATACGTGTGAAATATGTggtttcaatttaaaaacaaagattcaattgataaaacatCATCAGAATAGACATAGTGATGAGAGACCACTTCAGTGTAGTCGTTGTGAATGGCGATGTAAACAAGTTAGTGCTTTAGTTTGCCACGAAAGAACTCATACTAATGAGCGGCCTTATTCATGCATTGTATGTAAACAACGTTTCAAATATCTTGGCGATAAAAATAAGCATGAACGAAGACACGAGAGTCTCGGCGGTTCAGGATTCAAGCGAATTGTCGTTGGTCGAAATGTTAAACACATCAAAAATCATGAAGGTGAAATTTCAACATCCGAGAATGATCCATTAGAACAGGAATACCAAATCATTGATGGTCAATTAACCGATCAACACGTTGaatgtgatattaaatatgatgaaGAACAACAAATTATCAAGTTTGAAGGACAGGAAATAGAGAATGAGAAGCAAAACCATATTGAAGAGTTAGATCAGGAGCATCAGCAACATATTCAACAAGGGATCAATGAAGAAGATGACGACGAGGAAGAGgacgaagatgatgatgagatCGATATATATGAAGAAGAGGAAGATGACGAGGAAGATTTGGAGCATCAACAAACGCAGGAAGAGAGTGAAGCCGAAGCAGATAATGATTATAAGCAAGTGTATAAACATGATTATGAGGAAATTTCACGAGAAACATCTGAAGCTACGGAAGTTATTATGAATATGGAAGATGCAACGGTTTATACCGAAGAAGTAACAGCAGACAATATCGAAAGTGCAGAAATGATAAGTGCAGAAATGATGACAAATCAAATTTTACAAACGGGAACAGTTGTACATATACAACAACAGGACGATGATGGAAAAATTCAAGTAATTCCCGTTATGTTGTCATTACCTGATTTGACGGATTCAGCTACGGAAATAAATTTAGGTACTggatcaataatatataataattga
Protein Sequence: MESKTPKLIDPREKLSSYCRTCAGLKIPLIDIFSDRGIQMRLNQQMKHLENINQHDSLSTQMCMDCICDLKMSYKFFMQIKKAEVKLKSIHTSLSTVISTRALENQHNIIHDNNLTCSDKSNNTWRNPTEINLQESFPLGLIHTGSTDIVSHNVIIKSNIKPVSNYESMKTDDDVDNNNDDDDDDDDVQSIEEFDPEDHALESGDYGNTKTESKAENIIKKDDDSEMQLSNHKATIMSYSNNVNEMNNSIMENKIINETLYDNVKEVNGDVKIELENVIFDTCLESSSISGRGDITRENNKQPNILKRKPSWHGKTGNFISTNTDSIGKEAKIHKLNTVNISPSDEEGIMYVTVKGSKPNELLLVKVKKMDKSAEKKDDKSSIKKLIDVKPTEKSLKTLPLKDIFTDRSKKLENREAIIEEQIEQYKKKREKVLGGGNSGSSGADIAATNVVSTTTFMPSVAETDEFADRTLHLINFGNNLKQNLSIENSMLLKDESTNCVCEQKDNIEIKNNFQVNDENEIEIFKQSKVHNSEHENTKEYLARLMNIKQKWEEAKSKKELLQKELDHSYTEGNLEKLSKILGEKEKNLKEFQDYLKQRKIVITRLKDQDIISLYEDRNITSMHNKLPDLIDENPSIYSLDDNNLFDCDYCPQIFFTRSALEDHLKSHDYKIFYFCEDCGSEFPNNKTRRAHNITCIKKLICKYCDFMLESKGKKRQHEQKHCDTIFGQLCDICGEKFKHQGTLDQHIKTQHMSWEKVYQCPKCPKKFAFKQKLSFHVKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPTSNKRECPVCHKLVPFYSLSKHMYTHKAYTIQCPHCDKMFKNTSTLKQHIRIHEDQRQHRCDTCGVGFNRRDGLRLHMRVHQKSDSRALKECSCQICSEKFPNHSMLVIHRNRVHKDGKQYTCHICNRSMLSTRSLEWHMSHIHNETPTGVTLDDSANAIHMKRVSCNHCDKTFKTEMILRTHIKNTHMEKNPVKCLDCDLMFTSEVRLRHHMMIAHNRLEGTLTCPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCSRCEWRCKQVSALVCHERTHTNERPYSCIVCKQRFKYLGDKNKHERRHESLGGSGFKRIVVGRNVKHIKNHEGEISTSENDPLEQEYQIIDGQLTDQHVECDIKYDEEQQIIKFEGQEIENEKQNHIEELDQEHQQHIQQGINEEDDDEEEDEDDDEIDIYEEEEDDEEDLEHQQTQEESEAEADNDYKQVYKHDYEEISRETSEATEVIMNMEDATVYTEEVTADNIESAEMISAEMMTNQILQTGTVVHIQQQDDDGKIQVIPVMLSLPDLTDSATEINLGTGSIIYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01000771;
90% Identity: -
80% Identity: -