Basic Information

Insect: Microctonus hyperodae
Gene Symbol: -
Assembly: GCA_030347285.1
Location: JAQQBR010000006.1:370661-374097[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.5e-05 0.0033 17.5 0.6 1 23 151 173 151 173 0.95

2 15 0.0026 0.19 11.9 5.1 1 23 179 201 179 201 0.97

3 15 0.00011 0.0083 16.2 0.1 1 23 331 353 331 353 0.98

4 15 0.0086 0.62 10.3 0.4 1 23 359 382 359 382 0.98

5 15 6.9e-05 0.005 16.9 1.8 1 23 409 431 409 431 0.98

6 15 2.7 2e+02 2.4 0.0 1 20 447 466 447 469 0.79

7 15 0.3 22 5.5 0.0 2 23 476 498 476 498 0.95

8 15 0.01 0.75 10.1 2.4 2 19 506 523 506 527 0.94

9 15 0.00017 0.012 15.7 3.5 3 23 535 555 533 555 0.97

10 15 0.012 0.88 9.9 0.1 3 23 562 582 561 582 0.97

11 15 7e-06 0.00051 20.0 0.4 1 23 591 613 591 613 0.98

12 15 0.0031 0.22 11.7 0.2 3 23 621 641 619 641 0.97

13 15 0.00021 0.015 15.4 0.2 1 23 647 669 647 670 0.96

14 15 0.077 5.6 7.3 0.1 1 23 684 706 684 706 0.92

15 15 0.0071 0.51 10.6 0.0 1 20 1092 1111 1092 1114 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.5e-05	0.0033	17.5	0.6	1	23	151	173	151	173	0.95
2	15	0.0026	0.19	11.9	5.1	1	23	179	201	179	201	0.97
3	15	0.00011	0.0083	16.2	0.1	1	23	331	353	331	353	0.98
4	15	0.0086	0.62	10.3	0.4	1	23	359	382	359	382	0.98
5	15	6.9e-05	0.005	16.9	1.8	1	23	409	431	409	431	0.98
6	15	2.7	2e+02	2.4	0.0	1	20	447	466	447	469	0.79
7	15	0.3	22	5.5	0.0	2	23	476	498	476	498	0.95
8	15	0.01	0.75	10.1	2.4	2	19	506	523	506	527	0.94
9	15	0.00017	0.012	15.7	3.5	3	23	535	555	533	555	0.97
10	15	0.012	0.88	9.9	0.1	3	23	562	582	561	582	0.97
11	15	7e-06	0.00051	20.0	0.4	1	23	591	613	591	613	0.98
12	15	0.0031	0.22	11.7	0.2	3	23	621	641	619	641	0.97
13	15	0.00021	0.015	15.4	0.2	1	23	647	669	647	670	0.96
14	15	0.077	5.6	7.3	0.1	1	23	684	706	684	706	0.92
15	15	0.0071	0.51	10.6	0.0	1	20	1092	1111	1092	1114	0.94

Sequence Information

Coding Sequence: ATGGATGTGTCAGACGATTTGGCTTTGCAGTGGGTGGAAGAAGTTGGCAACGTCATTCATGAAGAGGTGATATGTGATCTCGAAACAGATATTGCTTCTCAAAATGGTGAAGCTGTAGGAGCCTGTGAAGAAGTGTCCATAGGAGAGACAACTGTACCGCGTCTCGAATCAAATTCGTCGACTAGAAACCTTCCTCCGCATGCAGAGATATTGATGGTACCGCAGTCAAATGATATGGAGTCTATTTATATTGTTCCACAAGATCAGGGTCATGATTACCTCAATATTCAAGTTACGGAAGAGGTCATCACAGATAATTGGGATAGATCGGGACCAGATGACGGAGTGGAGATTCCAGAAACGAAAGTGTCACATGATAACTTATTAGAGTACGATGACATGGAGATCCCATTACCAATCGATCAAGATTCGTATACAAATACACGGCCATATCCGTGTGATTTCTGCAGTCAAAGGTTTCGCAAAAAAGCAAATCTGATGAATCATATGGTGGCTCATCAAACAGATCGTCAACACAGTTGCAATCTTTGTGGTGCACGTTATATTCACAAATGCGATTTGAATAACCACCTCAAAATTCACGCATATCCACCATCGCGTGATAGTCTAGAAGACGAGCTGAATGATGAAGATTCGCTCATAcctgaagaagaagaaacaaTGAGAGGACGTCGCAAAAAAGTTCAATCATCAATACCtagaaaacgaaaaaacaaTGTTATTGGTGAAGGCAGTAATGTAATTAAGCGTAATATTGTCATGGATAATCGTCCATCAAAATTGGAGCACGGCAAATATGTGGGTAAATCTTACGATTATATTGATGAAGATATGCGTTTATTAGAAGTGATGACAGGGGGCCCCGGTAACAAAAATGCGAACCTTGCCTCAAGCTCACAATGGACAGAATCAATGATTACGACTGATTCGCAAGCACCTAGATGGCCTATTACTGACCCTACTAAACCCTACGTATGTCAATATTGTGGAGTAGGGTTTGCTAGAGAGAAGGCTCTAGCGTCACATTCGCGAATCCACGGTGGTGATAGTCCTTTCGAATGCACCAATTGTAATGAAATGTTTTGGGATGTGAATGCCTACAGAGAACATATGCGAATGAAGCATGGAGTTGGAGTTAACAACGATGAATATGATCCTACTACTAATGAGCTCAATTACACTGGTGATGAAAGATTCGGTGAATTTTACTGTGAGACATGTGGTGTACCATTTCATCGACTGGATCTTCTTAAGCGTCACCGAAAAATTCATGTTAAGCAAGAGGCAACAGAAATAGTTGATGAATCGAATCAGCATCATGTTTGTAATGTATGTGGTGAATGGTTTGAAGAAGCACTAGCACTTTTAGCACATGCTGGACTTCATGCTCGTTCACCAACACGACGTTGCTTATTGTGCGGGGAAATATATCGCAACGATGCTGAAGTAGCTGAGCATGTTCGTCAAAATCATGCTGAAGATGCCCCACTCAACACGTGCATGTTATGTGGCAAAACATGCAAAGATAAACGAAGTTTATTAAAACATTCATGGGTGCATAATGTTGACAAAACATTTGGTTGTACCAAATGTGGGAAACGCTTTCATAGCAAAGCCCGACTTCGTCGTCATATGGTGTCTCATCGCAATAAAATGGTTGCATGTGACGAATGCGGTGAAGAATTCCCTGATGGACGCGCTCTTGTCAGTCATCGCCATTCACACAATAAAGATTTAGGGGGCAGGTCATTTCCATGTCGTGAGTGTGGTAAAACATTTGGCAGTCGCAGCTCTCAACAAATTCATATACGCATCCACACTGGCGAGCGACCATACGGATGCCGATTTTGTTGGAAAGCCTTTGCTGATGGTGGTACCTTAAGGAAACATGAAAGAATTCATACTGGTGAAAAACCTTATGTATGTGCCATTTGTCCACGAGCATTTAACCAGCGAGTTGTTCTTCGCGAACATGTCCGAGCTCATCATTCTGGTCCCGATCCTAAATGTCATGGCAGTTTGACACCATATTTATGCAAAGTATGTAGTAATTCTTTCGCTACTTCCGAAGAAATTGTTCTTCATATTGTCCAACATTGTGATGAAAATACAGCCCTACAACGGCGACCTCAGGTTGGACCAAGGAAATATAAACGAAGACGCAAACTTAAATCACATGAGACACCATTGGCGATTGTCGGTAACCagtcgaatgaaaattataatgtaatgCAACCTCTAGAGTCAGATTCCGATGATAATACCAAACGAAAACTtggtagaaaaaataaacaacaacgTACAAATTTGGAGGATGGGTTTCAAAATATCTTGAAAAATTTCGAAAGTTCCATGCAAAATATTAAGACACCTATCAATAGTTCGAAATCATTGACATCACTCAAATCGaaacttttgaaaaaaaaaatgaaaaaagatgagaaaaaatcaATAGACGCACAATCACAACAGTCGCAGCATGGTCGGCCAAAGATGATACATACACAAAAAACACGAGTACCTGTTGAATTGGGTAGTGATGGTGTCAAAAAAGgccaaaaaacaaaaacattaGTTACGAGAACCCCAAAAGTTATTTTGAATGAACATAAACAAGGAACTATTCAAGGCGGCGAAAGAAATCGTCCAAGAACCAAAAATGTAAGTTACCATGTTGAGGGTAAATTACAGATGACGCCAGCAACATTCCCAAAACCAAAGGAGTTTGACAGTATTTTGAACACTCAGCCTTATACTCATATTGAAATCAAAGAGGAGGTGAATATTACGAGAAAGACCATTCAAGAACTGactaaacatgaaaataataatggcgtCGGAAATGCTATCGCTAAACCTGAATCACctacaaaaagaaaatctgTACGAGGTAAGAATTTGAAAAGATTAACAAGACAAATGTCAATCAAACAGGAGCCACATAATGATCGAATAGATGATGAGGACGTAGCGGACAATAATAACAGTGTATTAGTATCGCCGGCAATACTTGACACGACGAAGGTTGTTGATAATATGATGGTTGGCTTCAAgacaaataatatgaatgaagaAGAGGTTGAGGAACAAGAAACTATTTTACCAGATTTAGACGATATTAATCATACTGAAGAAGTGAGTaacaagaaaatgaaattacgcGTGAAAGTTGAGTCGACATCCGAGCATCAACATATGATGCAGAGTGTAGCAGATGATGTAGCCGAGACCATTATACCCGACACTATTGAATATACATGCGAGATGTGTTCTGCTGTATTTGCCAGTCGCACAGAGCTTCTCATTCACGTGCCCATACATATTTGA
Protein Sequence: MDVSDDLALQWVEEVGNVIHEEVICDLETDIASQNGEAVGACEEVSIGETTVPRLESNSSTRNLPPHAEILMVPQSNDMESIYIVPQDQGHDYLNIQVTEEVITDNWDRSGPDDGVEIPETKVSHDNLLEYDDMEIPLPIDQDSYTNTRPYPCDFCSQRFRKKANLMNHMVAHQTDRQHSCNLCGARYIHKCDLNNHLKIHAYPPSRDSLEDELNDEDSLIPEEEETMRGRRKKVQSSIPRKRKNNVIGEGSNVIKRNIVMDNRPSKLEHGKYVGKSYDYIDEDMRLLEVMTGGPGNKNANLASSSQWTESMITTDSQAPRWPITDPTKPYVCQYCGVGFAREKALASHSRIHGGDSPFECTNCNEMFWDVNAYREHMRMKHGVGVNNDEYDPTTNELNYTGDERFGEFYCETCGVPFHRLDLLKRHRKIHVKQEATEIVDESNQHHVCNVCGEWFEEALALLAHAGLHARSPTRRCLLCGEIYRNDAEVAEHVRQNHAEDAPLNTCMLCGKTCKDKRSLLKHSWVHNVDKTFGCTKCGKRFHSKARLRRHMVSHRNKMVACDECGEEFPDGRALVSHRHSHNKDLGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYVCAICPRAFNQRVVLREHVRAHHSGPDPKCHGSLTPYLCKVCSNSFATSEEIVLHIVQHCDENTALQRRPQVGPRKYKRRRKLKSHETPLAIVGNQSNENYNVMQPLESDSDDNTKRKLGRKNKQQRTNLEDGFQNILKNFESSMQNIKTPINSSKSLTSLKSKLLKKKMKKDEKKSIDAQSQQSQHGRPKMIHTQKTRVPVELGSDGVKKGQKTKTLVTRTPKVILNEHKQGTIQGGERNRPRTKNVSYHVEGKLQMTPATFPKPKEFDSILNTQPYTHIEIKEEVNITRKTIQELTKHENNNGVGNAIAKPESPTKRKSVRGKNLKRLTRQMSIKQEPHNDRIDDEDVADNNNSVLVSPAILDTTKVVDNMMVGFKTNNMNEEEVEEQETILPDLDDINHTEEVSNKKMKLRVKVESTSEHQHMMQSVADDVAETIIPDTIEYTCEMCSAVFASRTELLIHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00996542;
90% Identity: iTF_01000769;
80% Identity: -