Mhyp001717.1
Basic Information
- Insect
- Microctonus hyperodae
- Gene Symbol
- bab1
- Assembly
- GCA_030347285.1
- Location
- JAQQBR010000002.1:1220688-1221643[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.6 2.5e+03 -2.0 0.9 35 45 188 198 187 198 0.89 2 3 1.6e-09 1.1e-06 28.0 0.0 2 42 202 242 201 244 0.90 3 3 0.65 4.4e+02 0.4 0.1 5 15 255 265 253 266 0.84
Sequence Information
- Coding Sequence
- ATGTCTGAAGATACAACTCAATTTCAAATTCcaaatattgaacaaaattattgtttcaaaTGGAGCGATTATCAAAATCATTTGTCGAATGTTGTACAGCAACTATTGGAAGAAGATTGCATGGTTGATGTGACACTTTGTGTTGCTGGAGAACGTATTCATGCCCACCGCATAGTTTTATGCGCATGTAGTACTTTATTTCaagaAGTTCTCAGTGAATCAACAGAAGATCATCCAACTATTATAATTAGTGATATTTCACCTGAAGATATGAAATCAATCGTCGAATTTTCTTATCATGGTGAAGTCAAAATTCCTGTAGAAAGAATCAGTCATCTTCTTGATGCTGCTCATTCACTAAAAATATGTGGATTAATGGAgattgaAGGTTTGGATGAAAATGATTCGCttgttaatataaaagataCTATCGAAGATAgtgcaaataattttgataattcaaatgaatcgGAAAATAAAGTTTGGCAAACTATTGAAGATGTTGAAAATTCTGAAGATGATGGAAAGTTAAATGAGGAGAATgctaaattgaataaaaaaaatagaaaacgtAGACGTGAAACAGTgaaaagagaatataataatgatatgttAGAAGCAGCGATAAATGATGTTCGAAATGGACAATCACTTGTAGATGCAGcaacgaaaaataatgtacCACGTTCAACACTTTATATGCGTGCTAAATCACTGGGAATACAATTAAATGCTGCTAGAAATGAATATCCTGCTGAATGTATTAAAGCAGCAATAAATGCTGTGATTAGTGAGTAtcatattgtattttaa
- Protein Sequence
- MSEDTTQFQIPNIEQNYCFKWSDYQNHLSNVVQQLLEEDCMVDVTLCVAGERIHAHRIVLCACSTLFQEVLSESTEDHPTIIISDISPEDMKSIVEFSYHGEVKIPVERISHLLDAAHSLKICGLMEIEGLDENDSLVNIKDTIEDSANNFDNSNESENKVWQTIEDVENSEDDGKLNEENAKLNKKNRKRRRETVKREYNNDMLEAAINDVRNGQSLVDAATKNNVPRSTLYMRAKSLGIQLNAARNEYPAECIKAAINAVISEYHIVF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01002205;
- 90% Identity
- iTF_01002205;
- 80% Identity
- iTF_01002205;