Mhyp006307.1
Basic Information
- Insect
- Microctonus hyperodae
- Gene Symbol
- -
- Assembly
- GCA_030347285.1
- Location
- JAQQBR010000155.1:3439-4158[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-10 5.7e-07 28.8 0.0 5 41 29 65 28 67 0.90 2 2 0.3 2.1e+02 1.4 0.0 11 23 143 156 143 158 0.83
Sequence Information
- Coding Sequence
- ATGAAAAGAAAAGTGTTGTGTTCAAGTggaaatgaaacaataaaaaaaattaaacatcgGAGAATTCAATACAATCAAGTTAACATAGAGAATGCTTTAAAAGCGATAGAACACTCGGGGTTGTCATTACGAAAAGCAGCCACTGCTTTTGGAGTACCGGTAGCTACtctaagtagaaaaaaaaatgttgggccggataagataaaaaaaaaatcaggaccagatacaattttatcatctaCAGATGAGGACGAAATCGCCAAGTGGGTTTTGGATAGGGCTGCTATGGGAGCGCCCGTAACAAAAACAGAGTTATTAGACTGTATCCAAAAATATGTGCAAAAGTCTGCAATAAAAACTCCGTTCACAGATGATCGTCCCAGTCGCTACTGGTATGAAGGTTTTAGGAAACGTCATCCAGAATTAGCCGTTAGGAAACCCCAGCATTTGAGTTTGAGAAGAGCAGCTGTCACTTCTGAAGAGTTACAAGAGTGGTTCCAAAATTGTGGAAAATACTTGGAagacaaaaaattatgtaatatttctCCTACAAGAATTTTCAACTGTGATGAAAGCAGTTTACTTCTGTGTCCTGATGCAGAGAGTGTATTGGCGGAAAAAGGGCACGTGcggtttataaaattgttgatggTGGCAAAGAAGCCCTCACGGttctatttatgtatagagcTGATGGAGTTCGAGCTCCTCCGATGCTGa
- Protein Sequence
- MKRKVLCSSGNETIKKIKHRRIQYNQVNIENALKAIEHSGLSLRKAATAFGVPVATLSRKKNVGPDKIKKKSGPDTILSSTDEDEIAKWVLDRAAMGAPVTKTELLDCIQKYVQKSAIKTPFTDDRPSRYWYEGFRKRHPELAVRKPQHLSLRRAAVTSEELQEWFQNCGKYLEDKKLCNISPTRIFNCDESSLLLCPDAESVLAEKGHVRFIKLLMVAKKPSRFYLCIELMEFELLRC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -