Basic Information

Insect: Microctonus brassicae
Gene Symbol: -
Assembly: GCA_940306215.1
Location: OW675809.1:2173087-2180298[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.34 34 5.3 5.6 1 23 479 501 479 501 0.98

2 18 3.6 3.7e+02 2.0 4.5 1 21 507 527 507 530 0.95

3 18 0.00014 0.014 15.9 0.8 2 19 537 554 536 558 0.90

4 18 0.00031 0.032 14.8 5.2 1 23 564 586 564 586 0.99

5 18 0.00098 0.1 13.3 0.1 3 23 594 615 592 615 0.92

6 18 0.23 23 5.8 1.7 1 23 622 645 622 645 0.98

7 18 0.00021 0.022 15.4 0.8 1 23 649 671 649 671 0.97

8 18 0.0018 0.18 12.5 0.5 1 23 677 699 677 699 0.98

9 18 3e-05 0.0031 18.0 2.0 1 23 705 727 705 727 0.97

10 18 0.0021 0.21 12.2 0.0 1 17 732 748 732 749 0.90

11 18 2.4e-05 0.0024 18.4 0.3 1 23 1163 1185 1163 1185 0.97

12 18 1 1e+02 3.8 3.4 1 23 1191 1213 1191 1213 0.97

13 18 8e-05 0.0082 16.7 0.5 2 23 1220 1241 1219 1241 0.97

14 18 0.00023 0.024 15.2 3.4 2 23 1248 1270 1247 1270 0.93

15 18 3.1e-05 0.0032 18.0 2.2 1 23 1274 1296 1274 1296 0.98

16 18 0.043 4.4 8.1 2.0 1 23 1301 1323 1301 1323 0.98

17 18 1.9e-06 0.00019 21.8 0.2 1 23 1329 1351 1329 1351 0.97

18 18 0.00089 0.091 13.4 1.2 1 21 1356 1376 1356 1377 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.34	34	5.3	5.6	1	23	479	501	479	501	0.98
2	18	3.6	3.7e+02	2.0	4.5	1	21	507	527	507	530	0.95
3	18	0.00014	0.014	15.9	0.8	2	19	537	554	536	558	0.90
4	18	0.00031	0.032	14.8	5.2	1	23	564	586	564	586	0.99
5	18	0.00098	0.1	13.3	0.1	3	23	594	615	592	615	0.92
6	18	0.23	23	5.8	1.7	1	23	622	645	622	645	0.98
7	18	0.00021	0.022	15.4	0.8	1	23	649	671	649	671	0.97
8	18	0.0018	0.18	12.5	0.5	1	23	677	699	677	699	0.98
9	18	3e-05	0.0031	18.0	2.0	1	23	705	727	705	727	0.97
10	18	0.0021	0.21	12.2	0.0	1	17	732	748	732	749	0.90
11	18	2.4e-05	0.0024	18.4	0.3	1	23	1163	1185	1163	1185	0.97
12	18	1	1e+02	3.8	3.4	1	23	1191	1213	1191	1213	0.97
13	18	8e-05	0.0082	16.7	0.5	2	23	1220	1241	1219	1241	0.97
14	18	0.00023	0.024	15.2	3.4	2	23	1248	1270	1247	1270	0.93
15	18	3.1e-05	0.0032	18.0	2.2	1	23	1274	1296	1274	1296	0.98
16	18	0.043	4.4	8.1	2.0	1	23	1301	1323	1301	1323	0.98
17	18	1.9e-06	0.00019	21.8	0.2	1	23	1329	1351	1329	1351	0.97
18	18	0.00089	0.091	13.4	1.2	1	21	1356	1376	1356	1377	0.94

Sequence Information

Coding Sequence: atggagATGAAGTTTCCTGAGCATCAAGTGCATCAGGTCTGCCGATTGTGCGGACAATTTGAAAGTAtctatattgatatatttggcGAGGAAGGTACAAGAAGATTGCTTGGATTGAAAATACAAAGTAAAATCAACATTGTGATTGATGAGACGGATCCTCTACCAAAAACGATCTGCGTTCAATGTTTGGGCAAACTTGAATTCGTATGTGACTTCCAAGAGGAATGCCTTCGAACTCAACGACTGTTGCGCGATCAGTATGTTCATCCGACATTACCAGACGCCGGCCAAGATGTCACATCATTAGAAGTAAAAAATGATGCACCAACCTCAACTTCATCACCAACAACATCAACTACAACtacatcaacatcaacatcagCAACGAATACCACAACAATAACTACAGTTACAACATTAGCTAGtacatcaacaaataataatggcaGTGAAAGAAATCGTAATTCAACAgcagatattgaaaatgttgATCCAACAAAAGATGATAATTGCAAAGAAATTACGGAAAATACGGAGAATTCCAAGACTAAGAGAACGCGAAATTTACCACAAACACGTTCACGTAGTAAAGAAAATGATAGTGATAATACTCCGAAAATTGATGAGACACCAAGTCGACGATGGTTAAGAAGTCGTAATAGTACTGAAACAactaaaattgataaatcaacGCCAAAATCACgaaattcttcaataaatgccaataaaattcaatcgCCAAAGTCAAATGACGTATCAATAGCAACGAGATTACGTAGCCAGAATCAAAATCGTTcgaacaataataacaataataataatagtaataataataatattaataataataataatgatgatacaaCAAATGTTGAAACAATCAATAATGATACAATTGTAACGCAGGAAAAAATAGCAAGTGATAGACAACAATCAATGATACAAATTCCAACATtagtattgaataaaatactcACAGCTGTTTCAACATCACCGGATATTGAAGTATCAGTGAAAGAATCAAAGAATcgaaatggaaatattgaaGATATAAGTTTCACAATTGAATTACGTAAAAAACAAGAAACAGAAACATTTGTAACTGTATCAGCAAAAATATTTCCCGATCAAGGCTCATGTCTTGTTGAATCTGAgatagtaaatttattaaaagatgaaaataattcagaatTGAGTATGATTATAAGTACAATAGCATCAGGTAAAATTGCAAATTTAAAGGATACTGGCACAATAAATACGACAAAATTAGAGGAATTAGAAAAACGTTTTTCAAGCATTATTGACGGTAGTGGTATCGGAATTGATGGAACATCATCAAGAAAACCGGaggatttatttaaaattgacgGCGAAGAAATACGAGTTGATGATAATGTTGAATGTTCAACGGTCGATGGTCAAAGTGGATATTCATGTAAATTGTGTCGTAAATTTTATGAACGACGTGATAAATGTACAGTTCATGTTAAGACACATCTTGGTATAAAACAATACAGTTGTACATTATGTAGCGCTAAATTTGTATGTAAATCCGATGTAATGAAACATATAAGGTGCTCGCATACAAATCCACGACCGATGCAGTGTCCAAAATGTCCAAAACGTTTTCGTTCAAAATTCGATTTAACAGAACATGATAATGTACATAAAGGCGTTAAACCATATCAATGTAATAAATGTGGCCAGAGTTATCATCATAAAGTATCGTTACAAATGCATGTGAAATCACATTTACCACCACAAAATCTTGCGTGTGAATATTGCGGTAAAGTATTTCCATTTCGTACACGTTTGCTCAGTCATATTGGTAgtgttcatttaaaaaatcgtCGCAATTACCGATGTAGATTTtgttacaatttatattcaagtttATCAGTGTTAAATGAACATATTAAAACACGTCATGCAACAACATATACATGTGAAATATGTTCAAAAACATTTAAAGTTGTATCCAAGTATAAAGCACATGTATTACAGCATTCAAATCCAAAGCCATTTGTTTGTAATGTTTGCAATAATAGATATGCATCAAAAGCATTTTTAAATGAACATTTGCTTAAACATGAAGGTTTACGTAAGCACGTGTGTCAGAAGTGTGGCGCGAGTTTTGCTCAAGCAAGTCATTTGGCAGCACATCGTCATGTACATGGTGAAAAAACTCACGCATGTCCAGAGTGCGGACGAATGTTTAATAGACGTGATAATATGAAAATAAAAGAAGATGATGGTTTGTCTCATTTTATATGTGGTCGGTGTCTGGGAACTTTGGAGTTTGTGTGTGACTTTCATAAACAGTGTCACGACACACAACGTGATCTACAGGAAaagGTGTCAATATCTGCAACTGCTGTCACAGAAGAGATTGCAAAATTACCGGAAGATGATGCAGGATCGGATAAAGAAAATTCAGCACCACCAGAAGTGACACGAGTTCCtgctaatataaaaaaaagatcgTCAATAGATTCAATATCtccaaataattcatcaaacaatAATCTTCAAGAGCATCAATCTTCAGGAATTaatcatgataatattttagcTGACATTACGGTCGATTATTGTGAGCCACCAAAGCCTGCAGTGGCCAAAGAACTTTTTTCTAAGACACGTGGGGTGAAGAGAACGCGTGAAACTCCAGCTCGCAAAGCAAAACAAACTGAgcaaaaatcaattattgaaaattcgtCAAAACGtagacaaagaaaaataaatgacaccacgaaaagtataaaaaaaaatgaatcaaaaatattaccaTTTCTAAGTAAATCTGTACCTGTTATTGTAAAACAAGAACGAGATGATGAAACTGAAAATGTCAATgtgaatcaacaaaaaaattcaatagaatCAAATCCATTTGTATGGATACCAAATTCAATAGTGTTACCAGAACCTGATAAACCAAAGttaaataagaatgaaaaatcacaaaatgataatataacacTTGCAACCGGTGATGAAGCTGAAATTTCGTCCAAAACTGCGTCAGCAATAATGTCAGCAACAGAACCACCTGCAACTGCTAATGAATCGCGTAAAAGTGTCATTGAACGAGCAGAAAAATCGATTGAATCAGTAAAAAATGATTCTGACATAAGTAAACGAAATTCTACTCTGATAAAACGACGTAAGACTGGACCGTATGGTAAAATATCAGAGTTAATGAGCGCTGAACAAAAAGAAgcgattgaaaaatattatactattGATATGTCAGTGATTGATGAACGTGTTGTtcagaaaaattatacaatgacTGATAAAAAACAAGTTACATGTAATCTATGCAACGCAACGTATCCAAGAATTGATAAGtgtcatgtacatatatgggGACATTTAGATATGAAACCTTATCGTTGCAATGCCTGTGAATTTGCAACTGTCACTGTAACAAATATACGTTGTCATATACGAAAaagtcatttaaaaataaaaccgtTTGAGTGCAATGTTTGTACAAAACGTTTTGTCACTGCATCATTGTTGGAAGAGCATGCTTATACTCATACAGGTGCTAAGCCATTTCAATGCAAAGTTTGTGATTTTTCAAGTCACAGTCGTCAAGTTCTGGTCTACCACAATAAAACACATAAAGCTGTAAAgGATATTACATGTGACATTTGCAAACGACAATTTTATTCCAAGGGACGTTTGCGTGCTCATATGTTAATACACAATAAAGATAAAAGTCTTATGTGTAAATATTGTTCACAACATTTTACTAGTAAAGATACACTACAACGACACTAtagtaatattcattcatccgattatatttgtacaatatGTGGTAAACGTACAAAATCACGTAAAGCACTGCACAATCatcaaaatGTACACTCAGAGGCTAAATTCAAATGCCAACTGTGTCCTAATGTCTATAAGAGCAGTCACATTTTAAAAGAACATTTACTCAAGCATGAGGGCATTCGTAAATACATATGTGATATTTGTAATAAAGCATTTGCCCAACAATCACATCTTGCTGCACACAAAGCCGTGCATAGCGATAAAAGatttttttgtCCTGGATGTGAACGACCATTCAATCGTCATGACAATATGAAAATGCACACAAAACGCTGCGATATGTTTCTtgctgatgataaattaaaggATCTTATAGCTCAACGTCGAAGACCAGAGATAAAAGCCACTtcagataaagaaaaagacaTGGAAAAAGTAGAAATTAATGATAGCAAAGAAAATACTTCTAATAAGACTGACATTCTTTCTAATATTGAAAAGAATGAGAGTTTTAAAATAGGTGAGGTGAGCATAACTCCACTTGATAGTGTTACTGAGCCAGTGCaacaacaaacaaatgaagttGTTACCATTACTGAGAGTATTATTGGTCTtgaatgtttttaa
Protein Sequence: MEMKFPEHQVHQVCRLCGQFESIYIDIFGEEGTRRLLGLKIQSKINIVIDETDPLPKTICVQCLGKLEFVCDFQEECLRTQRLLRDQYVHPTLPDAGQDVTSLEVKNDAPTSTSSPTTSTTTTSTSTSATNTTTITTVTTLASTSTNNNGSERNRNSTADIENVDPTKDDNCKEITENTENSKTKRTRNLPQTRSRSKENDSDNTPKIDETPSRRWLRSRNSTETTKIDKSTPKSRNSSINANKIQSPKSNDVSIATRLRSQNQNRSNNNNNNNNSNNNNINNNNNDDTTNVETINNDTIVTQEKIASDRQQSMIQIPTLVLNKILTAVSTSPDIEVSVKESKNRNGNIEDISFTIELRKKQETETFVTVSAKIFPDQGSCLVESEIVNLLKDENNSELSMIISTIASGKIANLKDTGTINTTKLEELEKRFSSIIDGSGIGIDGTSSRKPEDLFKIDGEEIRVDDNVECSTVDGQSGYSCKLCRKFYERRDKCTVHVKTHLGIKQYSCTLCSAKFVCKSDVMKHIRCSHTNPRPMQCPKCPKRFRSKFDLTEHDNVHKGVKPYQCNKCGQSYHHKVSLQMHVKSHLPPQNLACEYCGKVFPFRTRLLSHIGSVHLKNRRNYRCRFCYNLYSSLSVLNEHIKTRHATTYTCEICSKTFKVVSKYKAHVLQHSNPKPFVCNVCNNRYASKAFLNEHLLKHEGLRKHVCQKCGASFAQASHLAAHRHVHGEKTHACPECGRMFNRRDNMKIKEDDGLSHFICGRCLGTLEFVCDFHKQCHDTQRDLQEKVSISATAVTEEIAKLPEDDAGSDKENSAPPEVTRVPANIKKRSSIDSISPNNSSNNNLQEHQSSGINHDNILADITVDYCEPPKPAVAKELFSKTRGVKRTRETPARKAKQTEQKSIIENSSKRRQRKINDTTKSIKKNESKILPFLSKSVPVIVKQERDDETENVNVNQQKNSIESNPFVWIPNSIVLPEPDKPKLNKNEKSQNDNITLATGDEAEISSKTASAIMSATEPPATANESRKSVIERAEKSIESVKNDSDISKRNSTLIKRRKTGPYGKISELMSAEQKEAIEKYYTIDMSVIDERVVQKNYTMTDKKQVTCNLCNATYPRIDKCHVHIWGHLDMKPYRCNACEFATVTVTNIRCHIRKSHLKIKPFECNVCTKRFVTASLLEEHAYTHTGAKPFQCKVCDFSSHSRQVLVYHNKTHKAVKDITCDICKRQFYSKGRLRAHMLIHNKDKSLMCKYCSQHFTSKDTLQRHYSNIHSSDYICTICGKRTKSRKALHNHQNVHSEAKFKCQLCPNVYKSSHILKEHLLKHEGIRKYICDICNKAFAQQSHLAAHKAVHSDKRFFCPGCERPFNRHDNMKMHTKRCDMFLADDKLKDLIAQRRRPEIKATSDKEKDMEKVEINDSKENTSNKTDILSNIEKNESFKIGEVSITPLDSVTEPVQQQTNEVVTITESIIGLECF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01000763;
90% Identity: iTF_01000763; iTF_01002272;
80% Identity: -