Mbra005339.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Microctonus brassicae
Gene Symbol
-
Assembly
GCA_940306215.1
Location
OW675803.1:11670579-11681059[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 6e-06 0.00061 20.2 1.0 1 23 235 257 235 257 0.98
2 31 0.0026 0.27 11.9 1.9 1 23 280 303 280 303 0.96
3 31 0.0011 0.12 13.1 0.6 2 23 310 332 309 332 0.96
4 31 0.00037 0.038 14.6 0.7 1 21 352 372 352 373 0.95
5 31 0.0026 0.27 11.9 0.1 2 23 478 499 477 499 0.96
6 31 0.012 1.2 9.8 0.2 1 23 505 528 505 528 0.93
7 31 0.00011 0.012 16.2 0.1 1 23 596 619 596 619 0.96
8 31 0.007 0.71 10.6 0.5 1 23 625 648 625 648 0.96
9 31 0.15 15 6.4 1.7 1 23 661 683 661 683 0.97
10 31 3.9e-05 0.004 17.7 1.1 3 23 731 752 730 752 0.96
11 31 0.0063 0.65 10.7 0.9 2 23 814 837 813 837 0.94
12 31 3 3.1e+02 2.3 0.0 2 23 846 868 846 868 0.84
13 31 0.05 5.1 7.9 0.1 2 23 875 897 874 897 0.95
14 31 1.2e-05 0.0013 19.2 1.2 1 23 905 927 905 927 0.98
15 31 0.043 4.4 8.1 1.4 2 23 962 985 961 985 0.88
16 31 0.0002 0.021 15.4 3.3 1 23 988 1011 988 1011 0.97
17 31 0.0048 0.49 11.1 0.5 2 23 1018 1040 1017 1040 0.95
18 31 0.0031 0.32 11.7 5.1 1 21 1070 1090 1070 1091 0.95
19 31 0.0026 0.26 11.9 1.8 2 23 1105 1126 1104 1127 0.93
20 31 0.34 35 5.3 1.1 1 23 1130 1153 1130 1153 0.94
21 31 0.0075 0.77 10.5 1.2 2 23 1160 1183 1159 1183 0.93
22 31 0.64 66 4.4 0.1 2 23 1191 1213 1191 1213 0.94
23 31 6.1 6.2e+02 1.3 0.0 2 23 1220 1242 1219 1242 0.87
24 31 0.22 22 5.9 2.7 2 23 1251 1273 1251 1273 0.96
25 31 8 8.2e+02 1.0 0.7 2 23 1279 1301 1279 1301 0.90
26 31 0.011 1.1 10.0 0.1 1 23 1364 1387 1364 1387 0.97
27 31 9.1e-05 0.0093 16.5 0.2 1 21 1413 1433 1413 1434 0.95
28 31 0.48 49 4.8 1.3 2 23 1535 1557 1534 1557 0.93
29 31 0.63 64 4.4 1.5 2 23 1564 1586 1563 1586 0.94
30 31 0.67 68 4.4 2.5 1 23 1597 1619 1597 1619 0.97
31 31 8.8 9e+02 0.8 0.1 3 19 1628 1644 1628 1647 0.93

Sequence Information

Coding Sequence
atggagTCGAGAGAACGTTATGATGAGCTATGTAGGCTCTGTGCTTCATATGACGCTGTCAAAATGGATATATTCGGTCAGGAAGGAAAAAATCGTCAGCttgttgataaaatacaaACGTGTTTGCCTTTCAAGaTTGATGAAGAGGATCGATTACCAAAATGTTTGTGCTATCGGTGTATGTACAATCTTGAGAATTTTTATGACTTTAGAACGGCTTGCGTTAATGCTGTTGCATTACTAGAACGATCATTACCACAGAAAGAGTTTTCAAATGGTCAGATACGTAATGAAATGGACAAACATTCCGAGTTGCGTTCAGAATTGCTCaaggaaaaggaaaaaatgcCAATTCTTATACCTGAAGCACCCATCGTAAATCCTAATGCCGCCTTAGGCACTCCGCCACGTTTGAATTCGGACGGTGAAGGCGACCAGGAAATTGAAGAAATCCTCGAACAAAGTGGCACCGATGAagGAATGGACGATAATGATGACAGAAAATCTGATGAATATGAAATGGACATGGAGACAAATCCAAGTGATTTCTTGGAAATGCCACCAATGGTAACTGAAGACATTGAAGAAATTGATAATAGAAATcaccatcaacaacaacagcaacagcagcagcaacaacaacaacaattaaattcactaTCACCTCCGATTTTTCAACACACATCAGAGCAACATGAAGTGTATGTTTGTTCATTATGCAATAAGGCCTTCAGTTCCAAGGGACACTTGTCACTTCATGCACGCATTCATGTGGGTGGCGGTGATGTAATTGGTGAGAAAGTCATCACTGACGATCATACATCATATAAACGACCTTATCAATGTGATCTGTGTAACAAATCATATTCAACGGCAAAACATCGGTGGGGTCACGTATCAACAACTCATCGAGGACATCCAGCTGTTACATGTAGATATTGCGCGAGGATATATTCAACGCGATCAAATCTTGACGAACATATAAAATCACGACACACTGGTGCGCCGCTACCTACTGAACTACCAACAGCTTATGTACAACAGGAAAATCGTTATCGATGTAAAACATGTCcaaaaatgtatacaaatatcaCAGAATTAAATAGACATAGTCGTAATTGTATGAATGATCGACAAAAAGATGCAACGACACGTGGAGTAATTGTTATTCAATCGGGTAAATCAAAGGGTAAAAGTCTCATGGATACGTCTGACGCATCGACAATTGAATCAGAGGATGATGGAAAAGATTATCGGACCGCTGAAGCAAAATTATCGAAGAATCCACAGTTAACAATATTGAAGCAAGCGTTAACGCGTAATGAGGGACTAAAACGCAATTCAGACGGTAGAATTTTGTCATACAAATCAACAAGAGTTTCGCAAGTTGATGGCAAAAGTCGTGTAGACTCAGACGGACAGAAGCGATGGTATTGCGAAACATGTCCACAATCATTCGtgtcaattgatttattgaaagaGCATGaaattactcatgaaacaGAGAAACcttatgtttgtatattatgtgaaaaagattttgttttaaaatcaTCATTGAGTAGGCATATTGTAACATCACATGGTGTTGATCCAGTGCCAATTATTGATAGTGATAAATGTTTGAAGAAAACAATTATGGGACAAATTGGTGGTAAACATATGTCGAgagttgatgaattaaaaggTAAACGAGAGCCATCGTctgaaatatcattttcatcagaTCGTAATGACGATGAGGAACGTGGTAATGGCGAAAatgttattgaaattgaaacagtttttgtttgtgaaattTGTACACGTGATTTTAACGATCGTGCATCATTATGGCTTCATATACGAGCGACACACAAAGAATTTGCTGCGTTTGCTTGTGgagtttgtttaaaaatatgcTCGGACAATGAGCAATTACTTAATCATGTTAATATGTATCATGGTGGTACAAAAATGTCAATGTCTGATCAGCGACGTTATAGTTGTACAATATGCGGCAGACAGCAtgattcaagaaaaaaattaatgtcacATGTATCAATACATAATGTGGATCCGGGCTATGATCCAGCTGGTTTTGTACAATTAAATAGCAATTATTACAACGAAAATTTTAATAGCAACGAAGGTTTAAATATcgatcaaaataatattgattttgacGCTGAAGACGGTGAAAAagttgattgttttatttgctATAAATCATTTCCAAATGAAGATCATTTAATTCGCCATCAACGAAATGCCCATAAATCCGAGCCAATTTCAGCGAGCGgtgaattaacaaatttaaatgGCACTGGAACAAATTCAAATGGTAATAAAGGACAATATCatctattttttgtttgtgaaattTGCAGTAGTTCACATTCAAGTAAATGGGAACGTTGGCTGCACGTAAGCAGTATTCATCATGAAGAACCATCAATTAGATGTGAACGCGACGattgtggaaaaatatttgccactaaatcattaaaaaatgatcATGTTCAGCATCATTTGATTCAAGGTGAATCACCAAATACATGTGAGATATGCGGTAAATTGTGGGGAAGTCGTGTAGATTATTGGAAGCATGTAATGGGTGTGCATTCTGATACTGTACCATTAATATGCGGTGTTTGTCTTAAAGTTTTTCCTGATGTTATTCAATTGAGCACACACGTTAAGAGTAAACATTGGCCATTGACAAATGGTGATTTTAGTTGTGACATTTGTGGACGTCcctattcaaataaatcaaaaatgtcAAGACACAGAAAAATTCATGGATTGGAAATTGATATTGGTTATAATAATGGTATCAATGAAACATTAAATGATACAATGATGAACTTTGAAGGGAATTTAAATGCCATTGAAATTGATCTTACATGTGGATTATGTTCAGGATTAACATTTGTTAATTGGAAAGATCTTTCACATCATCGTCGTACAAAGCATGCATTATTCCCGTGTGatttatgtaataaatgtTACGGTAGAACGTCACACTTGTGGAAACACGTTAATCGTGTTCATAAAGGTCATGAAGATGTTACTtgtaaatattgtatgaaaacAAGTGCATCCAAGGATCATTTAGCTGCACATATTGCAAAAATACATCGTTATGAACTTGATACAAAACAATTTGTTAATGAAACATCGATTTATAAAACTGCAAATGTAGAGGAGGATAATTCTGCCGCTGTTCATCATTGTGAGAAATGTAATAAAGGCTTCCATAAACGTTATTTATTACGACGTCACATGAAGGGTTGTCAAAATTATCGTAAAGATCCTGGTACATTATTGACACGCTGTCGGGCATGTGAGAGAATATTTAAAGATCGTGCAAGCTTACAAAAACATATTGAAAATCATCATAGCAGTTATACGTGTCATTTGTGCAATGAAACTATAACGTCAAAGCTCGGTATAATGACACACAATCGTGTTAATCATATGGATCATCCGGATCTTACGTGTGAAAATagcaattgtaaaaaattattccgtACAAAAGAAGATTTAGAATTACATAGAAAAGatcataaatatcataattcACCTAATGTCTGTGATTATTGTGGCGATACAGTTGAGAATAAgcttaaattaaaaatgcatGTTCTTTCACTTCATCGTAATGAAATTGGTGTTTCATGTGGCGTATGTTTAATTCCAATGAGAGATCCACAGGATTTAAAGAAACACGTTGAAGATGTTCATTCAACAGTTCTTTTAATGCCAAATACATGTCAAGTTTGTGGAAAACAATATGCATCAAAATGGAAGGCATTTGATCATACGAAAAAATGTCATGGAAAAGTTTTTCGTACATGTAAACGATGTCTAGCAGTTTTTACAACAGATGCTGATATTAGATATCATTATGAACATATTCACAATGTGCCCAAGGATCAATTGGCTGGATTTGAACATCATTCGGATATGTCGGGTAAAGGTGATGATCATGATAATTCTGTAGCAGCTATTAAAGACGAACCTGATTACACCGAGTATGATGAcggtatttataataatgttaatcaTTTTAAAGGGAAAAAACGAAGACGATCTCATCATGATACATATGATTGTGAAATTTGtccagaaatatttttaaatcgcGACACATTGTCGGAGCATTACCAAACAATACACAATACTGATCCTGAGAggatgtttaaaaaaataaaaactagtaattcaaagaaaacaaagaaaaatcgtGGTAATTTTGAATGtcaaaattgtaataaacaaTTTGGTACAAATTCACAATTATGGAATCATATCAGCGTTTGTTCACGTAGAAATTCAATAAGAGATGAATCACCAAATAATTATGCAACATCGATTCTCGAatcacatttaaaaaataataatcaaattaaaaaagaacCAATTGATTTAATGCTCAGtgaatcaaatttaaatattccggatttcaatttatttgaagacattaatttacaattatctGGACAAAAGCCATTACCAAATCTTATGCCATTgtctaatattaaaatatcacaaggtaataataaatgttatcGAAAGGATTCGAGAAAAGTCTATGATGAATCGACAAATACAGTTTGTGCATGTGAAGTTTGTGGCAAACAATGGCCggcaaaaaaacatttatggCAACATTTAATTCGATTTCATCGAGCAGAGGCTGCAGTTACTTGTGGtgtttgtttaaaattatgcAGTACTTATAGAGATTTATCACAACATTTGAAAGACACTCATGAGGCAATATTATCATGTGagggaaataattttacatgtaAAACATGCGGACGATATCACAATGCACGAAGCAAACTTTTATTACATATGAGCATTCATATCAATAATCATGAACACATTTGGTGTGAAAAATGTGCATTGAGTTTTGACAGTGATGAAAAACTCGCTCAACATTCAGCTAAATGTATTGTAAAACGACGCACGgaagaaattgaatttgaagaaCAAAGTAATGATATTGATGTGAAAATGGAGGGTGAAGAGGATAAAGGCAGTCTTATTGGTGATGAAGCGTCATTACTCGGCGAAGGTGAAGAAGAAGCTGATTTTGAATCTGATGCTGAGGAAGAGGCATCTGACGCTGAAAATCACGATGAAAATAGCAATTTAGATCATTCTGAGGACTCTGACAGTAGCACTAATGGTAGTGGAAGCGAGGCGGAGAATGACAATGAATCACGGACAAATAGTAGAATAACCGGTGATGTGAGCTGTCAAACAGACAGTGAGGATCGTGATTCAGATgaatatgatgaaatgaaaaatactgataaacatataaataaaaagcgaCAACATAGTCATCCGCATGAGAGCAAAAGTCGTGATGTCGCGataaaaaaaggagaaattaATAACCCAGAAATCGAAAAAGTGGAACAAGTCAAACATAAGGTTGAGAAAAAAGTAACAAAGGTTAATCAAATATCttgtaaagaagaaaaaattgctgATGATTCTGATGATGACGGCCCGCCTATTTTAAGTCCGATGATGCCAATTGTTAATAATGACATGGACGCTAGAGTTTATAATTCCACCAGTACATCAAACCATAAATTGAGTCCTATGGCGTCGCCAAATCCTGAACGAGACAATGAAGTAGAATTACCTGAACTCGATGAAATCGATGATGTCGATGAGAATGTCCGTGGAAtatcaacaaattcaaatacCGCTGATTATGACGATTATTTATCAACTGCTAAATCAAATGCAAGTGTTGCCGTGTCATTGGAAGAAATTGAATTGGATAatgaggaggaggaggagcaGGAGGAGGAAGAGGAAAGAGACGAAAATATGGCAGATGATGATAGTAGATTACAAGTAGAACAATCGACATCGAATTTAATGTCAGAGAAGGGTCATGAGGAAAATATACAAGataatgacgatgatgaaattgatgataatgatgataataataatgatgatgatgatgatgataatgatgaaggtAATGAGGACAATGAGGACAATGAAAATGTCGTAATTGATGAAGAGACTGGTGAAATATTTGAGGGTGAAATTGCTAGTGATGCAATGCAGATTGATGATTTAGAGGGAACTGTATTGATGGTCGCTAATGATGATGAAGGTAATCAGATATTGATTCAACGAAATGTCGCTGAAATGAGTAATGATGAATCAATGGAAGGTGTTACGAGTTATATTTATCAAGCAGAGAATGAGGAGGAGAATTATGATGAGGATGAAGGAGACGTTTATCAAGTGGGTCAGGAGGATGGTGGTGAAAGTCAAGATGACGATGAGGAAACTAATGCAAAAGtggaagaagatgaagaacaagaagaggaggaggaggaggaagaAGAGGATATAGAAAATCATgatcaaatgataattattcaaagtgAGCATGAAGAAGAGAGTAATGATTTGGAGGCTAATTCAAGTGCCAAAAATGATGTGTCAAGGACGTAG
Protein Sequence
MESRERYDELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKIDEEDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERSLPQKEFSNGQIRNEMDKHSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEGDQEIEEILEQSGTDEGMDDNDDRKSDEYEMDMETNPSDFLEMPPMVTEDIEEIDNRNHHQQQQQQQQQQQQQLNSLSPPIFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGGGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRYCARIYSTRSNLDEHIKSRHTGAPLPTELPTAYVQQENRYRCKTCPKMYTNITELNRHSRNCMNDRQKDATTRGVIVIQSGKSKGKSLMDTSDASTIESEDDGKDYRTAEAKLSKNPQLTILKQALTRNEGLKRNSDGRILSYKSTRVSQVDGKSRVDSDGQKRWYCETCPQSFVSIDLLKEHEITHETEKPYVCILCEKDFVLKSSLSRHIVTSHGVDPVPIIDSDKCLKKTIMGQIGGKHMSRVDELKGKREPSSEISFSSDRNDDEERGNGENVIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNEQLLNHVNMYHGGTKMSMSDQRRYSCTICGRQHDSRKKLMSHVSIHNVDPGYDPAGFVQLNSNYYNENFNSNEGLNIDQNNIDFDAEDGEKVDCFICYKSFPNEDHLIRHQRNAHKSEPISASGELTNLNGTGTNSNGNKGQYHLFFVCEICSSSHSSKWERWLHVSSIHHEEPSIRCERDDCGKIFATKSLKNDHVQHHLIQGESPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIQLSTHVKSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLEIDIGYNNGINETLNDTMMNFEGNLNAIEIDLTCGLCSGLTFVNWKDLSHHRRTKHALFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCKYCMKTSASKDHLAAHIAKIHRYELDTKQFVNETSIYKTANVEEDNSAAVHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGTLLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRVNHMDHPDLTCENSNCKKLFRTKEDLELHRKDHKYHNSPNVCDYCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMRDPQDLKKHVEDVHSTVLLMPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKRCLAVFTTDADIRYHYEHIHNVPKDQLAGFEHHSDMSGKGDDHDNSVAAIKDEPDYTEYDDGIYNNVNHFKGKKRRRSHHDTYDCEICPEIFLNRDTLSEHYQTIHNTDPERMFKKIKTSNSKKTKKNRGNFECQNCNKQFGTNSQLWNHISVCSRRNSIRDESPNNYATSILESHLKNNNQIKKEPIDLMLSESNLNIPDFNLFEDINLQLSGQKPLPNLMPLSNIKISQGNNKCYRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCSTYRDLSQHLKDTHEAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINNHEHIWCEKCALSFDSDEKLAQHSAKCIVKRRTEEIEFEEQSNDIDVKMEGEEDKGSLIGDEASLLGEGEEEADFESDAEEEASDAENHDENSNLDHSEDSDSSTNGSGSEAENDNESRTNSRITGDVSCQTDSEDRDSDEYDEMKNTDKHINKKRQHSHPHESKSRDVAIKKGEINNPEIEKVEQVKHKVEKKVTKVNQISCKEEKIADDSDDDGPPILSPMMPIVNNDMDARVYNSTSTSNHKLSPMASPNPERDNEVELPELDEIDDVDENVRGISTNSNTADYDDYLSTAKSNASVAVSLEEIELDNEEEEEQEEEEERDENMADDDSRLQVEQSTSNLMSEKGHEENIQDNDDDEIDDNDDNNNDDDDDDNDEGNEDNEDNENVVIDEETGEIFEGEIASDAMQIDDLEGTVLMVANDDEGNQILIQRNVAEMSNDESMEGVTSYIYQAENEEENYDEDEGDVYQVGQEDGGESQDDDEETNAKVEEDEEQEEEEEEEEEDIENHDQMIIIQSEHEEESNDLEANSSAKNDVSRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01560624;
90% Identity
iTF_01000754; iTF_01002261;
80% Identity
-