Basic Information

Insect: Microctonus brassicae
Gene Symbol: ZNF236
Assembly: GCA_940306215.1
Location: OW675809.1:659791-666214[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 4.1e-05 0.0042 17.6 1.0 2 23 53 74 52 74 0.97

2 24 3.1e-05 0.0032 18.0 2.0 1 23 95 117 95 117 0.98

3 24 0.00012 0.012 16.2 0.7 1 20 123 142 123 145 0.93

4 24 1.1e-05 0.0012 19.4 0.7 1 23 151 174 151 174 0.95

5 24 0.0015 0.16 12.7 2.2 1 23 184 207 184 207 0.98

6 24 2.2e-07 2.2e-05 24.8 1.8 1 23 319 341 319 341 0.98

7 24 7.2e-05 0.0073 16.8 2.3 1 23 347 369 347 369 0.99

8 24 0.00035 0.036 14.7 1.3 1 23 375 398 375 398 0.97

9 24 0.11 11 6.8 0.5 5 23 406 424 405 424 0.96

10 24 0.00027 0.027 15.0 3.6 1 23 480 502 480 502 0.98

11 24 1.4e-06 0.00015 22.2 2.3 1 23 508 530 508 530 0.99

12 24 1.3e-05 0.0013 19.2 1.2 1 23 536 558 536 558 0.98

13 24 0.00039 0.04 14.5 7.4 1 23 564 586 564 586 0.98

14 24 0.00025 0.025 15.1 1.3 2 23 914 936 913 936 0.91

15 24 0.28 28 5.6 2.1 2 23 959 980 958 980 0.96

16 24 0.00012 0.012 16.2 4.7 1 23 986 1008 986 1008 0.98

17 24 0.079 8 7.3 0.8 2 23 1020 1042 1019 1042 0.96

18 24 8.3e-08 8.5e-06 26.1 0.8 2 23 1123 1144 1122 1144 0.98

19 24 0.02 2.1 9.1 6.9 1 23 1150 1172 1150 1172 0.98

20 24 6.1e-05 0.0062 17.1 4.3 1 23 1178 1200 1178 1200 0.97

21 24 0.00084 0.086 13.5 3.3 1 23 1206 1228 1206 1228 0.99

22 24 0.00019 0.02 15.5 1.9 2 23 1461 1482 1460 1482 0.97

23 24 7e-06 0.00071 20.0 3.9 1 23 1488 1510 1488 1510 0.98

24 24 3.9e-06 0.0004 20.8 4.7 1 23 1516 1539 1516 1539 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	4.1e-05	0.0042	17.6	1.0	2	23	53	74	52	74	0.97
2	24	3.1e-05	0.0032	18.0	2.0	1	23	95	117	95	117	0.98
3	24	0.00012	0.012	16.2	0.7	1	20	123	142	123	145	0.93
4	24	1.1e-05	0.0012	19.4	0.7	1	23	151	174	151	174	0.95
5	24	0.0015	0.16	12.7	2.2	1	23	184	207	184	207	0.98
6	24	2.2e-07	2.2e-05	24.8	1.8	1	23	319	341	319	341	0.98
7	24	7.2e-05	0.0073	16.8	2.3	1	23	347	369	347	369	0.99
8	24	0.00035	0.036	14.7	1.3	1	23	375	398	375	398	0.97
9	24	0.11	11	6.8	0.5	5	23	406	424	405	424	0.96
10	24	0.00027	0.027	15.0	3.6	1	23	480	502	480	502	0.98
11	24	1.4e-06	0.00015	22.2	2.3	1	23	508	530	508	530	0.99
12	24	1.3e-05	0.0013	19.2	1.2	1	23	536	558	536	558	0.98
13	24	0.00039	0.04	14.5	7.4	1	23	564	586	564	586	0.98
14	24	0.00025	0.025	15.1	1.3	2	23	914	936	913	936	0.91
15	24	0.28	28	5.6	2.1	2	23	959	980	958	980	0.96
16	24	0.00012	0.012	16.2	4.7	1	23	986	1008	986	1008	0.98
17	24	0.079	8	7.3	0.8	2	23	1020	1042	1019	1042	0.96
18	24	8.3e-08	8.5e-06	26.1	0.8	2	23	1123	1144	1122	1144	0.98
19	24	0.02	2.1	9.1	6.9	1	23	1150	1172	1150	1172	0.98
20	24	6.1e-05	0.0062	17.1	4.3	1	23	1178	1200	1178	1200	0.97
21	24	0.00084	0.086	13.5	3.3	1	23	1206	1228	1206	1228	0.99
22	24	0.00019	0.02	15.5	1.9	2	23	1461	1482	1460	1482	0.97
23	24	7e-06	0.00071	20.0	3.9	1	23	1488	1510	1488	1510	0.98
24	24	3.9e-06	0.0004	20.8	4.7	1	23	1516	1539	1516	1539	0.96

Sequence Information

Coding Sequence: ATGACGCTCGCAGTTGACTGCATGAATTTTGCTCTACTTGTTGTTTGCTCCCGAGTATTTCACTTTGCACTTGGACTTAGTGCACAATATTACAAGGCGCAATTGGACACACACTTGAGacttcataatgaaaaatggaCAAGTGATGATGTGAAAAAATGCAAGCTCTGCAATAAACAATTTACACAGCCCGCTCTCTATCGAGTTCACATACGAGATCATTacaaaCTGCAGACAAAGataatgaaacaaacaaaaagaGGACCGAAACATAAAACTTTACACAAATGTCGAATATGCctgaaaatattccaaaaaccAAGTCAATTAATGAGACACATTAGAGTTCATACAGGAGAACGACCTTTTGTGtgTAATATTTGTCAACGTGCATTTACGCAAAAGAATTCATTACAAATTCATAAATGGAGACACGTTGGAGATCGTCCATTTAGTTGTGATCATTGTAATGCTAAATTTAGTCAAAAagGAAATTTAAATGCACACGTGGCAAGGGCACACAATCCATCGCAGGATGATGGACCTGGCTATTCTTGCATGATGTGTTCGTGTGTTTTTAAACGAATAGCGAGTTTAAGTATTCATATGAAGAAAATGCACAGATATCCTGTTGAAAAATCAAAGTGCGACAGTTCAactgaaatgaataaagataaaaataaatatgaatcaaCGATGATTAATTCGAGTGTTAAAAATAACGCCGATTCAACtgattttgaattgaataataaacataaaagtgATATTTTACAAGAGGCATTAAAAAAAAGTGGATTAtcaagtaaagaaaaaaatactaatatagAAACAACAGAAGAATCAAAAGACAATTACAGCACTTCATACGTTACATTATTGGACAAAACTCCAGATGGTGCATTgagACGGTATATAACGATAAAACAGCGTAATATCGACAATATTAAATGGTACGCTTgcaattattgtcataaagaatttaaaaagcCATCGGATCTCATACGACATTTACGAGTACACACACAAGAAAAACCGTACAAGTGTCCACATTGTTACCGCTCATTTGCACTAAAGTCAACGATGCTCGCCCACGAACGAACTCATACTGGCATTAAGAAATATGAATGCGGTGTGTGTGGCAAGAAATTTGCTTGTCACAGCAGTTTAAATGCTCACATAAGTTCTGCACATGTGAAAGAGAATAATTATGACGAATGCGACAAGACATACGAGTCAAATAGTAATTCAAAATCGCATTCAAAGACACATGCGAGggcaaaaacaaaaatatcaccAGATGCCGAAgcattaattgaacaaatagTATTGGAAGAGCCATTGATGATAAGTGACGCGGGTAATCAAATAAGTGTTGCACATATACAATCGAAACAGAAACAAATTACAggtgaaaatgatgatgatggtagACCACACAAATGTTGGGTTTGTCCAGCAGCATTTCGTAAAATAAGTCATTTAAAACAACACTATCGTCGTCATACTGGCGAGCGACCATTTAAATGTACCAAATGCGACAGGCGTTTTACATCAAATAGCGTTCTCAAAGCACACTTACAAACGCATGAAAAATCACGGCCATACAATTGCAATGTGTGCAACGCTAGATTTTCAACGCAAAGTAGTATGAAAAGACATTTGGTTACGCATAGCAACAAACGACCATTCATGTGTCCATattgtcataaaacatttaaaacaACAGTTAACTGTAGGAAACATATGAAAATTCATAGAACTGAGCTCGCACAACAGCAATTGGAGAAAGATAAAATGCAAATATTAACAAcggatggaaaaaattcatcaatatctggagaaatacaagaaaatttaaatttacacgatgatatttcaaatacatttcaacaaaatattaccACAGATTTTACCCAAGCATTTAACgatcaattaaaatcaattgaggcaattgataaaaataatttatcaagcATAAATGTTGTAGAtgttaatacacaaaataattcaattacgGAAAATTTATCGGCTGTTAATCCTGACAATTTGGAAACAACTCAAACACTTCACGCAGATGAAACTGGAACAATAACACTACCAAATTATTCTGGCGATGGTCCTCTCACTCAAGAGAATATTCGTGAATTGGAGGAAACATTGaatcaacaattattcaatCTTGATGTGAATTTAGGATtgggaaataatttatcacgTCAAATTAATGGTGATTATATAACAGAGGAACGTGATCGACCAgtactaaatataatttatgataatccCAAAGAATTGAATCATAATGATGAACAAACagctaatacaaatatattcactCCAAATTTTGATACATTTGACATAAGTCAAATAACACTTCAAGCTGATACGGAAATGGATATTGGTATAAATGCTGCGAATTCAACGAGTATGGCGAGCATATTACCAAGATCAGCGCAAGAGGAGCAGCATTTAATAATCCCCGAAGCAtcaaataacattattaaaaataataatcatataaaagaTGGCGTACAACAATTAGttgttgtaaataattcatcgcaaatatttcaacagcaacaacagcagtTGTCAAAAATACAATCgtcatatttaaaatatccaaaaataattgcCAAAGCTGATACAACAAATGACACagatataaattcacaacaacaacaacaacagcaacaagagttgcaaaatgaaataattgaaagtaatgaaaatttaaagtgtcaatattgtgataaaatatttaaaaaaattcacgattTAAAAGTTCACATTGTATTATCTCAcgtgacaaataatattaaattaataaatgacaatgacgataatgataaacatgataatgaattattgcAGTGTCATATGTGTTATAAAAAAGGTTTTGATGCGTTAAAATTGAAGGAACATTTATCAACACATCGTGGCGCAAAAGAATTTCAATGTACCGAGTGTCATTTAAAGTTTTGTACAAATGGCGGATTAAGTcgacatttaaaaatacataatgttGATAAAACAATTGTTGATACATGCTGGACATGTTCAATGTGCTTTGATACATTCGCCAATGAAATGGAATTGAAATTGCATAAAAAAACGACACATGGTGAtactgatgatgataataatattacacaacAAACAATTAATTGGAATGTAACGAAAATTGAGCCAGATAGTTCACAGCAGCAGACAGAAACGGCAATTAATACAGAATTATTAACAGTTAATTCagttaatacaaataaaaaaattctactaaATGCcgttattaatacaaattattttaaatctaatgatgataatcaattattaattcaaaaaattaataaagaatacgataataaatgtgaatattgtcCAAAAACATTTCGTAAACCCAGTGATTTAATTCGTCATGTAAGAACACACACTGGCGAACGTCCATATCGTTGTGAGCATTGTGACAAAAGTTTTGCTGTTAAATGTACACTCGATTGTCATATGAAAGTTCATACgggcaatgaaaaattttgttgtcaCGTTTGCAATCGATTATTTGCTACAAAAGGAAGTTTAAAAGTTCATATGCGTTTACATACTGGATCAAAGCCATTTAAATGTTTGATGTGCGATTTAAAATTTCGTACATCAGGTCATCGTAAAGTACATTTATTAACGCATAtgcgagaaaataaaaataacgatggtaataaaataaaaaaaaataaaaaaatggctggagcaataaattcatcgacaattttatcatcggaaattaatgagaaattaattaaaaattcgacGAATACCACCAGTAATAATGAAACATCATCGGAAATAAATGcaacaaatttaaatcaaacTGCAGATTATCAAAATTTAGATACAATAACAATTGACACTACTGGAATATCTGATCAATTAACATTTAATCCTGATggtacaatattaaataataattcagtgTTATCAGTGAATGAGAGCAATCAACTTGTGGCtgatttacattttttaattgccAGTGGTTTAGTAACAATTCAAACAGATGAAACTTTATTGCCACAATTAAATTGTCctgatacaaatattaatcatgATCAAGCAGTGACAGCAACAACAACGATAACGGAAACAGAAGCTACACATGAATTAGTTAGTTCAAATAATTTGGAAGAaacgagaaataatttaattattcctacacaaattgaaaatattcaaagattacaacagcaacaattgaatgatattatgTCGCTTGTTGAAATATCAACGATCAATTCAGTGAATGAAATTCCATCGGTGAATGGTGAAATAAAAGCGAcagtaaataaatcaaatggtaaaacacaaataatgaaaaatcaatcgAAGAAAGAGTGCGATATTTGTGGTAAAACATTTATGAAACCTTGTCAAGTTGAACGACATAAACGTATTCATACTGGTGAACGACCATTTAAATGTGAATTGTGCTCAAAATCATTTGCTCAAAAATCAACCCTGCAAATACATCAAAAGCATCACACTGGCGATAGACCACATCCATGCCCATATTgtgattattcatttacacaaAAGTGTAATTTACAAACGCATTTGAAACGCGTACATCAATATGAAACAATGGAGGGTAAAAAATTACGACGTAATCAGCATATTATGAGCGCTAAATTGTATCacgatagtaataatattaatatgaatgacAATCGAATGCCGAATTTGGATGATTTGTCATTTGGTGAATtgctaaaataa
Protein Sequence: MTLAVDCMNFALLVVCSRVFHFALGLSAQYYKAQLDTHLRLHNEKWTSDDVKKCKLCNKQFTQPALYRVHIRDHYKLQTKIMKQTKRGPKHKTLHKCRICLKIFQKPSQLMRHIRVHTGERPFVCNICQRAFTQKNSLQIHKWRHVGDRPFSCDHCNAKFSQKGNLNAHVARAHNPSQDDGPGYSCMMCSCVFKRIASLSIHMKKMHRYPVEKSKCDSSTEMNKDKNKYESTMINSSVKNNADSTDFELNNKHKSDILQEALKKSGLSSKEKNTNIETTEESKDNYSTSYVTLLDKTPDGALRRYITIKQRNIDNIKWYACNYCHKEFKKPSDLIRHLRVHTQEKPYKCPHCYRSFALKSTMLAHERTHTGIKKYECGVCGKKFACHSSLNAHISSAHVKENNYDECDKTYESNSNSKSHSKTHARAKTKISPDAEALIEQIVLEEPLMISDAGNQISVAHIQSKQKQITGENDDDGRPHKCWVCPAAFRKISHLKQHYRRHTGERPFKCTKCDRRFTSNSVLKAHLQTHEKSRPYNCNVCNARFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTTVNCRKHMKIHRTELAQQQLEKDKMQILTTDGKNSSISGEIQENLNLHDDISNTFQQNITTDFTQAFNDQLKSIEAIDKNNLSSINVVDVNTQNNSITENLSAVNPDNLETTQTLHADETGTITLPNYSGDGPLTQENIRELEETLNQQLFNLDVNLGLGNNLSRQINGDYITEERDRPVLNIIYDNPKELNHNDEQTANTNIFTPNFDTFDISQITLQADTEMDIGINAANSTSMASILPRSAQEEQHLIIPEASNNIIKNNNHIKDGVQQLVVVNNSSQIFQQQQQQLSKIQSSYLKYPKIIAKADTTNDTDINSQQQQQQQQELQNEIIESNENLKCQYCDKIFKKIHDLKVHIVLSHVTNNIKLINDNDDNDKHDNELLQCHMCYKKGFDALKLKEHLSTHRGAKEFQCTECHLKFCTNGGLSRHLKIHNVDKTIVDTCWTCSMCFDTFANEMELKLHKKTTHGDTDDDNNITQQTINWNVTKIEPDSSQQQTETAINTELLTVNSVNTNKKILLNAVINTNYFKSNDDNQLLIQKINKEYDNKCEYCPKTFRKPSDLIRHVRTHTGERPYRCEHCDKSFAVKCTLDCHMKVHTGNEKFCCHVCNRLFATKGSLKVHMRLHTGSKPFKCLMCDLKFRTSGHRKVHLLTHMRENKNNDGNKIKKNKKMAGAINSSTILSSEINEKLIKNSTNTTSNNETSSEINATNLNQTADYQNLDTITIDTTGISDQLTFNPDGTILNNNSVLSVNESNQLVADLHFLIASGLVTIQTDETLLPQLNCPDTNINHDQAVTATTTITETEATHELVSSNNLEETRNNLIIPTQIENIQRLQQQQLNDIMSLVEISTINSVNEIPSVNGEIKATVNKSNGKTQIMKNQSKKECDICGKTFMKPCQVERHKRIHTGERPFKCELCSKSFAQKSTLQIHQKHHTGDRPHPCPYCDYSFTQKCNLQTHLKRVHQYETMEGKKLRRNQHIMSAKLYHDSNNINMNDNRMPNLDDLSFGELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01002253;
90% Identity: iTF_01002253;
80% Identity: -