Mbra000450.1
Basic Information
- Insect
- Microctonus brassicae
- Gene Symbol
- bab1
- Assembly
- GCA_940306215.1
- Location
- OW675801.1:3909260-3911026[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6 5.7e+03 -2.7 0.0 8 21 86 100 84 100 0.65 2 2 1.9e-11 1.6e-08 34.2 0.0 4 45 366 407 363 407 0.94
Sequence Information
- Coding Sequence
- ATGGGTACCTCATCAGATCAACATTATTGTCTACGATGGAACAATCATCAGTTAAATATGCTGACAgtgtttgatgaattattgcaAAATGAGGCATTCACTGACGTAGCACTTGGAGTTGACGAAGGAATATTCGTTAAGTGTCATCGTATGATATTAGCCGCATGTTCATCATATTTTCAAAAGCTCTTCGTTGAAATACCATGTAAAAAtccaataattattctcaaagacgttaaatatacacaaataaaagcgatacttgaatatatgtatCGCGGTGAAGTGAGCATTGCTCAAGATCAATTGTCTACATTGTTAGAAATAGCTGAATGTTTGAAAATCAAAGGTTTAGTTGAGGACAATGGTTCATCATCAACTTCGGACGATGTGTCACAGACACCGCAGACAACTCAATACTGTCCGGAAACGGAAAATTCATCTTCACCACCGCCGACAATTACAACTAGCACAGTCTCATCTAATATACCACAAAATTCAGACAATGTTAATGAACATACTTCACCACCTCATTCAACTAGTGCACCATATCATATTTATGGTAAATCACCATCGATACCAATTAATCGTACGCATATTGAGCCACGTTTACCAACCCCTATGTGGAATATTCCATTTGCTGGACATCAAAATTTAACAATTGCCCATCAAACATCACAATCAGCCCATCAACAATCATTTCTTGCATCGCATTATGAAAGTATTGATCCACATAATACCAAAAGATTGCCAAATTTACCAAATTTTTTAACCAATCGTGATACTCCAATATTACGTGGTGTGCTTGGTCAAGGTCATGCTGATAGCTCACAAGGAATGTCTATTCCGCGACCAGATAGTCGTGATTATCGTAGTCCAAGCAATGAATCTGCTAATGATAATGCTGAAGTTAGGCGTAATAGCATGGATGTATCGCATGATCGAAATAGTATGGATTTAAGTGGATATAATCTTTCGCCGATTAATGATGAACGAGAACGAGTACGAGAACGTAGACGTTCACCAAAATTTCATGAGGGAactaaaaaatctCAAAAAGTTGAATGGAAACGTTACAAACAATATACAAAACGAGACATAGAATTAGCAATTGATGATGTTAAAGGTGGTATGAGTGCCCTTAAAGCAGCAAAAAAACACGGTGTTCCCTCTCGTACACTTTAtgataaagttaaaaaaatggGTATGGCACACTCGCGACGAAGTTCAAATCCAAGTTCAGCAAGCTTTCCACGTGGAATTGGCGGAAATATTAATGGCAATATTTATgcatcaatttataataatgacagTGACAATTTACACAGTAATCTCACTAGAATAACGTTAGAGAGTTCTGCGGCATTAATTGAATCAGCATTATCAAAAAATCGTGATAATTCTAATGATCAAGATGCagaaatggaaattttatCAAGAGCAAGAGCAAACTCAAGTCCAATTTTATCTCATTCAAATTTAtcacagcagcagcaacagcaacaattAACATTACCACCGATACTTCCACCATCGCAATCTCAACATCAACATGACACTGATAATGAAGTTGAAGATCTATCGATAAATCGTAAGTCAGATCATCGAGTTATTGTGCCACCGCTCAATATCAAAGAAGAAAATTCTGATCCACCAGAAAATTTAAGCCGTACCTaa
- Protein Sequence
- MGTSSDQHYCLRWNNHQLNMLTVFDELLQNEAFTDVALGVDEGIFVKCHRMILAACSSYFQKLFVEIPCKNPIIILKDVKYTQIKAILEYMYRGEVSIAQDQLSTLLEIAECLKIKGLVEDNGSSSTSDDVSQTPQTTQYCPETENSSSPPPTITTSTVSSNIPQNSDNVNEHTSPPHSTSAPYHIYGKSPSIPINRTHIEPRLPTPMWNIPFAGHQNLTIAHQTSQSAHQQSFLASHYESIDPHNTKRLPNLPNFLTNRDTPILRGVLGQGHADSSQGMSIPRPDSRDYRSPSNESANDNAEVRRNSMDVSHDRNSMDLSGYNLSPINDERERVRERRRSPKFHEGTKKSQKVEWKRYKQYTKRDIELAIDDVKGGMSALKAAKKHGVPSRTLYDKVKKMGMAHSRRSSNPSSASFPRGIGGNINGNIYASIYNNDSDNLHSNLTRITLESSAALIESALSKNRDNSNDQDAEMEILSRARANSSPILSHSNLSQQQQQQQLTLPPILPPSQSQHQHDTDNEVEDLSINRKSDHRVIVPPLNIKEENSDPPENLSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01560568;
- 90% Identity
- iTF_01002200;
- 80% Identity
- iTF_01001502;