Mbra004951.1
Basic Information
- Insect
- Microctonus brassicae
- Gene Symbol
- KBTBD4
- Assembly
- GCA_940306215.1
- Location
- OW675803.1:7431138-7433087[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.1e-08 4.4e-05 23.2 0.0 2 38 202 238 201 244 0.88 2 4 8.8e-13 7.6e-10 38.5 0.0 5 39 255 288 252 295 0.84 3 4 0.21 1.8e+02 2.1 0.0 21 34 322 335 308 341 0.80 4 4 1.8e-13 1.5e-10 40.7 0.1 5 39 367 401 366 406 0.93
Sequence Information
- Coding Sequence
- ATGTCTGAAGATACAACTCAATTTCAAATTCCTCACATTGAGCAGAGTTATTGTTTCAAATGGAGCGATtatcaaaatcatttgtcAAATGTTGTACATCAATTATTGGAAGAAGATTGTATGGTTGATGTGACACTTTGTGTTGCTGGAGAACGTATTCATGCTCACCGCATAGTTTTATGCGCATGTAGTACTTTATTTCAAgaagTTCTCAGCGAATCTACAGAAGATCATCCAACTATTATAATTAGTGATATTTCTCCTGAAGATATGAGATCAATTGTCGAATTTTCTTATCATGGTGAAGTTAAAATTCCTGTAGAAAGTATCAGTCACCTTCTTGATGCTGCTCATTCACTTAAAATATGTGGTTTAATGGAgattgaAGGTTTGGATGAGAATGATTCGCTTGTTAATGCAAAAGATTGTATTGAAGATAGTACAAATACTTTTGATCATTCAAatgaattggaaaataaagtTTGGCAAACTATTGAAGAGGTTGAAAATTCTGAAGatgatggaaaattaaatgaagataatgccaaagtgaataaaaaaaataaaaaacgtagACGTGAAACGGCGAaaagagaatataataatgatatgtTAGAAGCAGCGATAAATGATGTTCGTGGTGGACAATCACTTGTAGATGCAgctacaaaaaataatgttccACGTTCAACACTTTACATGCGTGCTAAAGCACTGGGGATACAATTAAATGCTGCTAGAAATGAATATCCTGCTGAATGTATTAAAGCAGCAATAAATGCTGTAATTAATGGTGCGAGTTTTCAACAGGCATCTGATTTGTATAGCATTCCAAAAACAGTATTATGGAGACGAATACAAAAAGAAGGTTATCATATATTGAGATCGGAAATGAAAAGATCATATGATGCTGGTAAAAGAGAAGCGGCAGTTAAAGCTTTAGAAAGAGGAGAAAATCTTACGAAAGTTGCATTAGAGTTTAAaATACCCAAGACAACGTTATTTAGGGATAAAACGAGATTAGTAGATCAGGGTAAATTACCTGAATCTTTTTGGCGAAAGCGTAAAactgaagatgaagaaatgaaaaaacttcGTCTTGAGGAAGCAGTTGCAGCATGTATAGAAGGTAAAATGTCTCAAGCTGCTGCAGCAGTGGCTTTTCATATTCCAAAAACGACAATATGGCGTCGACTACAGAAGGAAAATCGTAAAACTGATAGAAATGATGTTCATAAAAGACAAACGGAAAAAGTTGAGCCTTcagttgatgataaattaaaatgtgaaGATAATGGAGAGTTTTCGTTGTGTGagGTTTCATCGGATCTTCCGATAacttatattgatgaaaatagtTTGCCAGAAGATTCTGTTATAATTTTAACTACAGATGATGTTGATGAGCTCGGTATGGATGACAATCGTGAAATAGTAGTCAATACGgaTTCTGGTCATGAATTTATGCCATGTTCACTAAATATAGAAGACAGTGCGAATTATGCGTCTAGCGAAagctaa
- Protein Sequence
- MSEDTTQFQIPHIEQSYCFKWSDYQNHLSNVVHQLLEEDCMVDVTLCVAGERIHAHRIVLCACSTLFQEVLSESTEDHPTIIISDISPEDMRSIVEFSYHGEVKIPVESISHLLDAAHSLKICGLMEIEGLDENDSLVNAKDCIEDSTNTFDHSNELENKVWQTIEEVENSEDDGKLNEDNAKVNKKNKKRRRETAKREYNNDMLEAAINDVRGGQSLVDAATKNNVPRSTLYMRAKALGIQLNAARNEYPAECIKAAINAVINGASFQQASDLYSIPKTVLWRRIQKEGYHILRSEMKRSYDAGKREAAVKALERGENLTKVALEFKIPKTTLFRDKTRLVDQGKLPESFWRKRKTEDEEMKKLRLEEAVAACIEGKMSQAAAAVAFHIPKTTIWRRLQKENRKTDRNDVHKRQTEKVEPSVDDKLKCEDNGEFSLCEVSSDLPITYIDENSLPEDSVIILTTDDVDELGMDDNREIVVNTDSGHEFMPCSLNIEDSANYASSES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01001509;
- 90% Identity
- iTF_01001509;
- 80% Identity
- iTF_01001509;