Mbra016426.1
Basic Information
- Insect
- Microctonus brassicae
- Gene Symbol
- retn_1
- Assembly
- GCA_940306215.1
- Location
- OW675811.1:4119025-4123558[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-19 2.3e-16 60.1 0.0 18 89 30 99 23 99 0.94
Sequence Information
- Coding Sequence
- ATGGTTTTGCGCGCGGCGTATACTGAACAGTCAAGAGACGAAGACAGAACAGAAGTAGTGAAGCGACGTGTGTACCTATTAATATGGACGCCAATCAATCGATTGCCAATAATGGCAAAGTCTGTGCTTGATCTTTACGAGCTGTATAATTTGGTAATTGCCCGGGGTGGATTGGTTGACGTCATCAATAAAAAACTATGGCAGGAAATCATCAAAGGCCTCCACCTGCCGTCGAGCATCACTTCCGCTGCGTTCACTTTGCGCACCcaatatatgaaatatttatatccatatgAATGCGATAGACAACAATTATCAACGCAGTTGGAATTACAAGCGGCAATTGACGGTAACCGACGTGAAGGACGACGGAGCAGCTATGGTGCTTATCCTGGTCCAGGTGGGAATGAATCTATGATACAAAGAAATTCCCATACACCCACCTCTGGGGCACTACACACACAAATGTCACCATTATCCCTTGTAACAACGGTTGGAGGTCACCATCTTGGTCCACAATCGATGATGAATGGGAATGGAGCACTTAACCCTATGACGCACCATTCTCTTCTACCCTCGCACGCCCAATTTTTATTGGGACCACCAAATTCCGGTAATTAA
- Protein Sequence
- MVLRAAYTEQSRDEDRTEVVKRRVYLLIWTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDRQQLSTQLELQAAIDGNRREGRRSSYGAYPGPGGNESMIQRNSHTPTSGALHTQMSPLSLVTTVGGHHLGPQSMMNGNGALNPMTHHSLLPSHAQFLLGPPNSGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01000327;
- 90% Identity
- iTF_01000327;
- 80% Identity
- -