Maet008654.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Microctonus aethiopoides
Gene Symbol
-
Assembly
GCA_030347275.1
Location
JAQQBS010001422.1:7380483-7384637[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.00059 0.053 13.9 0.3 2 23 228 249 227 249 0.95
2 13 0.48 44 4.8 3.5 2 21 353 372 352 373 0.94
3 13 0.041 3.7 8.1 0.8 3 23 391 411 389 411 0.95
4 13 0.0046 0.42 11.1 0.2 1 20 485 504 485 506 0.95
5 13 0.059 5.3 7.6 0.4 2 23 560 581 559 581 0.94
6 13 0.00087 0.078 13.4 0.2 1 23 602 624 602 624 0.95
7 13 0.2 18 6.0 0.7 1 20 629 648 629 650 0.94
8 13 0.0041 0.37 11.3 3.4 1 23 668 691 668 691 0.94
9 13 0.0011 0.1 13.1 0.0 1 23 1074 1096 1074 1096 0.95
10 13 3.2 2.9e+02 2.2 1.9 1 23 1202 1226 1202 1226 0.93
11 13 0.037 3.3 8.3 1.5 1 23 1259 1282 1259 1282 0.96
12 13 0.63 57 4.4 1.5 1 23 1321 1345 1321 1345 0.96
13 13 0.0019 0.17 12.3 1.7 1 23 1356 1378 1356 1378 0.97

Sequence Information

Coding Sequence
ATGGATCGTCAAAAAGAATTGCTAAATCTTTGCAAAccgttatttataaaattgactCGTGTGTCTCATTCAGATTATCATAAATGGAAACAAGGAACAAGCCAAGTTGAACGTCCTCACTATCGTCGTAGACATGCATGGCGAAGAGGCGACTGCAGAAGTTCAACCTCAGTAAGAAATCAGAGAATTAAAAAGCGCTCagcgaaatatatattgagtgaCAGCGACGATGAGTTATCGGAATCACATACATTCAATGACAATGCTAATGATACAATTTTAAGTAAATGTGAAAGAACTAATGAATCTGATATTACCGTCCAAAATACACAAATTCAAGTTATTGATAATTCTATTGTATTACCAAAGAATAATATGCCAATTACTGATAAAGTTGCGTGGAAATATAAGCGAAAACGGCAGAGAACATCACAATCCACTTCCAACGAACTAGTacaagagaatgaaaatattgaaacgtCAAATACAATACAGCCAAATAATTtggataatgaaaatgaaaatgaaactaCTCAAGTTGATTTAagcaaagaaattaaaatagtaTCATCACGATTAGAAGATTCTGATGATCCACAAGTTGAAAAATGGCGATCAAAGAAAAAAGCACTTTCATTACCAAAATCAAGATCGCGTTTACTGCCGAAATCAAATAGTCTTAATTGTACGGTGTGCTCGattgtatttgaaaataaagaagaattatCAAATCATATTTTCAAGCATACACAACGTGAATTACAAGATGCATACAAAGCTGCCAAAACTAAATTACGAGAAAGTGAAAGTAATGTTGATGCTGGAAATATCAGTGATGAATTTGATGATTGTGATGAATCGACTAGTAAACTCAATCAATCTACCATTTCAGAATCACACGCGCACAACGATAcatctaaaataattcaacctATACCTTCATCTTTAATAACTACATCGACTCAAGCATCAGAGACTGTGCCAATGGTTATTTGTTCATGTCATACTGAACGTTATCCGCAAAACGATGCAAGTGTCCAAATTGAAATGGTTCTTTATTGTGAAACGTGTCATGTGCTCTTTCGTCGCAGTGAATGCTTCGAGACTCACTATCGTTTCAGTGCAAAATGCAATGCAGATCGTTCAAAAGGCAGAAGCCCCAAATTATTTTGCAGCACATGTCGAATAATTCTCAATACATTATCGAATATGCGTCGACATTTACAGGAGCACgcaagtataaattttcatgggACCGTCACATTTGTTTGCAATATATGTCGAGTTGTATTTTTTGGTGTCGGAACAGTATTTTGCACTCATTGGTTCAATCATGAAAAAGATCCTACATTTGTGGCGAGTCGTTATTCATTTCCAAAATTGTGTATTTCAACTCAAGGTACAAAACCTGCAGGTAGTGGACCAGATGAACAATATGTTTTTGTTGCAGAATATGTTTGTCGTTTATGTAAATTACAATTCTCTTCTGAAAGTGAACTTACAGATCACactgaaaataattgcaataatggATCATCAGATGTTCAAGTACAAAATAAGTCATTGTCAGATGCAAAATCTgccataaataatttgaaatcaaaattaaagTCTACGACAAATCGAGCGAAAAAAGATTCATCATCCTCAAATATATTAGATATGGTCAATAATTGGATTTGTGAATTTTGTAATGGATCTTATTCAAGCCGCAGTGCATTTGAAGAACACAGCACTAAACATTTACAAGAAGATGGATACCCTGGTTATAGCTGTGTGTTTCAGATGAATGCATCAACagcatttttatgtaatatttgtcgtcgcatttatgataatttgtcAGATTTAATCAAGCATTGGGTAACACAcgaagttataaaatttatttgcactGCCTGTAATGAAAAGTGTTCATCCTATGCTTCATTTGAAACTCATATTTCTTTGGGTTGTTGGAAGTCCAAGCCTGATTGTAGAGTGTGGTTTAATCGACAGCAGCATGTCTGCAAAATTTGTAAATCAATGTTCAAAACTGCTGAAGAATTAGTTCATCACTATAAGTTTGAACATGGTGCAGCAATCGAAACCAACAATACTAAAAATCCACCATCAAAATCACTTCCTTTTATGGAAACACCGCCGGTTTCTGAAACGTCAACTAGTCCACATTCtaagaaaaatgaatcaaGTAAAATAACAAGTGCTGATTTACCTCCAAATCTTGAAACTTTATCAGCGTCTGGGAATTCATCTAACTCTAGTTATCCCCAAAATTCAGCAGTGATAATCAATACACAAGCTGTCGATTCAGATATTGAAAATGCAGTTAGTAAAGAACCACCGTTACAAAAACTtcgaacaataaaaataactataccAAATTTGGTTAGTTCAGGTGAAAAATATGGTAATAATGATCAAATAACATTGAACAATAATTTGCAAAATGGCATATCAGAAATTTATCAATCGACAAACGCGACCGTATCGGTTGATTcgttaaataaacaaattacaaatattacgAATTCTCCATTAATTGAAAGCTCAGTGAACAATCAGCCATTAAATCTGAAAGAATCTTCCACTAGAATCGTTATAAGAGACTCATGTATACATAGTTCCAAACTCATAATCGCTGATacaattccaaataaaaatattgatgataataatagaagTGCACGTATAAATATTGGCAATTCGCAAATACTATTGTCAATAATACCAACATCAGCTAATTCTAGCCCGCAAGTAATAACATTATCGAATAATATTCCAATGGTCCCTAATGAATCAGATTCAAATAGCGGAAGTGATGCagtagaaataattgaaaattccaaaatttctGAAAAGGTGAATAAAATACCAGATAAAGTAGtggaaatgaatgaaaatgatgaattagaTATCATTGAAATTCCCAATAATTCAAATGGTCTAACGTCAGATACCTTTGtacaaaatcaaaatataaaagaaccTGAGGTAATACAATTagaaaattgtaaattgaatGGTTCGGAAAGCACTCATAGTTCATCCAATAGTCGGCGAAATCATCAACCAAATACATCCAACAGCGAAAATATTCGTCCAGTTGCTAGTGaaacaacaaatgaaaataatcaatgttCAAATAGTACTGACACATCCATGCCTCGTGGATTTTTACgagtgaaaaaatttacagAGTTACAAGCTATTAGAAATTACGTATGTAATCAGTGTGGTGCAGCCTTTGATAATGTTAAATCACTAGAAGAGCATATAGTTGCTCATACGAGACGATTAACTGGAAATGAAAAACATCCAACTATGATGGCTGCTCTTATTTTACCACAAGTTGAACCAGATCATATCGAAAAAGTAGATAGTACCCCCACAGTCTTATCGTCTGTCCCACAAATTGGTGGAAAACGAATTTTACCACCTATTCCCCAACGAGTAACAAATGCAGATGCAAGAAAAGCTAGTCCATTAGTGCATGGGCAAGtcgttaataaaatttacaatgcaCAAGTGACACCGCCAACACAAAATGTCTCGAATTTAGTAATATTACCACAAATTGACTCACAAGCCAATCAATCATTTTATACGTGTCCATTGTGCTTGGTTTTTCGCTGTGAAAATTCCGAAGAATTCAAAAATCATTTGACCACTAAtcactataataatattgccCCAAACATTAACTCTAGTTTTAACAATTCTAATACTACCCAATCAGTGTTGAATGAGACATCCAAAGAAAAGCAAAAAGTTTACACATGTAaggtttgtaaatataatacaaccaATAGAACCATGATAATTGagcatatacaatattttcatcttaGTGAATTTCCTCAAGctacgaataataatattcctaGAAGCTCTGAAGCTATCCAACAAGCTGATTATACTACTCCTGTTAATAATCTAATTCCAAGTAGTATACCGCCATTTAAATGTAGTTTATGtacaaattatcaatataattcgcTTGAAGAGCTCTCGCGGCATTTTCAAACAGTTCATCAATTTCCGCAAAAAGATATTTACCATCcgtttatttgtaatatttgttttcatttatttaaaacgtatagtgaattaattattcatctaaATCAACATCAAAATTCTGGTTggacatga
Protein Sequence
MDRQKELLNLCKPLFIKLTRVSHSDYHKWKQGTSQVERPHYRRRHAWRRGDCRSSTSVRNQRIKKRSAKYILSDSDDELSESHTFNDNANDTILSKCERTNESDITVQNTQIQVIDNSIVLPKNNMPITDKVAWKYKRKRQRTSQSTSNELVQENENIETSNTIQPNNLDNENENETTQVDLSKEIKIVSSRLEDSDDPQVEKWRSKKKALSLPKSRSRLLPKSNSLNCTVCSIVFENKEELSNHIFKHTQRELQDAYKAAKTKLRESESNVDAGNISDEFDDCDESTSKLNQSTISESHAHNDTSKIIQPIPSSLITTSTQASETVPMVICSCHTERYPQNDASVQIEMVLYCETCHVLFRRSECFETHYRFSAKCNADRSKGRSPKLFCSTCRIILNTLSNMRRHLQEHASINFHGTVTFVCNICRVVFFGVGTVFCTHWFNHEKDPTFVASRYSFPKLCISTQGTKPAGSGPDEQYVFVAEYVCRLCKLQFSSESELTDHTENNCNNGSSDVQVQNKSLSDAKSAINNLKSKLKSTTNRAKKDSSSSNILDMVNNWICEFCNGSYSSRSAFEEHSTKHLQEDGYPGYSCVFQMNASTAFLCNICRRIYDNLSDLIKHWVTHEVIKFICTACNEKCSSYASFETHISLGCWKSKPDCRVWFNRQQHVCKICKSMFKTAEELVHHYKFEHGAAIETNNTKNPPSKSLPFMETPPVSETSTSPHSKKNESSKITSADLPPNLETLSASGNSSNSSYPQNSAVIINTQAVDSDIENAVSKEPPLQKLRTIKITIPNLVSSGEKYGNNDQITLNNNLQNGISEIYQSTNATVSVDSLNKQITNITNSPLIESSVNNQPLNLKESSTRIVIRDSCIHSSKLIIADTIPNKNIDDNNRSARINIGNSQILLSIIPTSANSSPQVITLSNNIPMVPNESDSNSGSDAVEIIENSKISEKVNKIPDKVVEMNENDELDIIEIPNNSNGLTSDTFVQNQNIKEPEVIQLENCKLNGSESTHSSSNSRRNHQPNTSNSENIRPVASETTNENNQCSNSTDTSMPRGFLRVKKFTELQAIRNYVCNQCGAAFDNVKSLEEHIVAHTRRLTGNEKHPTMMAALILPQVEPDHIEKVDSTPTVLSSVPQIGGKRILPPIPQRVTNADARKASPLVHGQVVNKIYNAQVTPPTQNVSNLVILPQIDSQANQSFYTCPLCLVFRCENSEEFKNHLTTNHYNNIAPNINSSFNNSNTTQSVLNETSKEKQKVYTCKVCKYNTTNRTMIIEHIQYFHLSEFPQATNNNIPRSSEAIQQADYTTPVNNLIPSSIPPFKCSLCTNYQYNSLEELSRHFQTVHQFPQKDIYHPFICNICFHLFKTYSELIIHLNQHQNSGWT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01002361;
90% Identity
iTF_01001685;
80% Identity
-