Basic Information

Insect: Microctonus aethiopoides
Gene Symbol: -
Assembly: GCA_030347275.1
Location: JAQQBS010001422.1:26004836-26007997[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 9e-06 0.00081 19.7 0.3 1 23 369 391 369 391 0.97

2 15 0.87 79 4.0 0.3 3 19 399 415 397 415 0.90

3 15 9.2 8.3e+02 0.7 1.0 3 23 425 445 423 445 0.93

4 15 2.5e-05 0.0023 18.2 0.5 3 23 454 475 452 475 0.96

5 15 8.6e-05 0.0078 16.6 0.2 2 23 483 505 482 505 0.95

6 15 0.021 1.9 9.0 0.7 1 23 511 534 511 534 0.91

7 15 1.2e-06 0.00011 22.4 0.4 2 23 560 581 559 581 0.96

8 15 5.4e-05 0.0049 17.2 1.6 1 23 588 610 588 610 0.96

9 15 6.2e-05 0.0056 17.0 0.5 2 23 621 643 620 643 0.94

10 15 0.14 13 6.4 1.6 1 23 649 672 649 672 0.92

11 15 6.8e-05 0.0061 16.9 2.8 2 23 694 716 693 716 0.96

12 15 0.0031 0.28 11.7 0.6 2 23 723 745 722 745 0.96

13 15 0.014 1.3 9.6 1.6 1 23 754 777 754 777 0.94

14 15 0.0074 0.67 10.5 1.0 2 23 784 805 783 805 0.97

15 15 2.8 2.5e+02 2.4 1.9 1 23 811 833 811 833 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	9e-06	0.00081	19.7	0.3	1	23	369	391	369	391	0.97
2	15	0.87	79	4.0	0.3	3	19	399	415	397	415	0.90
3	15	9.2	8.3e+02	0.7	1.0	3	23	425	445	423	445	0.93
4	15	2.5e-05	0.0023	18.2	0.5	3	23	454	475	452	475	0.96
5	15	8.6e-05	0.0078	16.6	0.2	2	23	483	505	482	505	0.95
6	15	0.021	1.9	9.0	0.7	1	23	511	534	511	534	0.91
7	15	1.2e-06	0.00011	22.4	0.4	2	23	560	581	559	581	0.96
8	15	5.4e-05	0.0049	17.2	1.6	1	23	588	610	588	610	0.96
9	15	6.2e-05	0.0056	17.0	0.5	2	23	621	643	620	643	0.94
10	15	0.14	13	6.4	1.6	1	23	649	672	649	672	0.92
11	15	6.8e-05	0.0061	16.9	2.8	2	23	694	716	693	716	0.96
12	15	0.0031	0.28	11.7	0.6	2	23	723	745	722	745	0.96
13	15	0.014	1.3	9.6	1.6	1	23	754	777	754	777	0.94
14	15	0.0074	0.67	10.5	1.0	2	23	784	805	783	805	0.97
15	15	2.8	2.5e+02	2.4	1.9	1	23	811	833	811	833	0.93

Sequence Information

Coding Sequence: ATGAGAGATCGATGGATTGAAGCAATGCGTTGTGAAAATTTCCAACCAACGCAATATACCAGAATTTGTTCAAAACATTTCACTCCTGATTGTTACGTGAGCAAGTCTCCAGGTTCgaaaaaacttttgaaaaaagatGCTGTACCAAGCATTTTTGATTTTCCAATTCACGTGATAAAGGGAACAACACCTAGAAAACTTTCGGAATCGAGATTGCAACCACAAAATATTGAGgttcaaaatgaaaatgaaccAGATAAACACACAGTAACAACAAATGACAAGATCTTCACAGAACCTCttgtaaataagaaaaaagctTCCTATGTTGGTAATTTCAAAAAACGTTCTTATTCAACGAAAGATAATCggtataaatttatgatgaacTGGGTGCTGACAATGAAACAGAagcaaataagaaaattacaGCAGCATAATAGACAGCTTCTTAAGAAAGTAtctaatttgaataattcattgaaaaatttaaagcgTCAGCAAATGATTAACAATAATCGTTCATCGGAACTTCATGGTACTATTCCCGTTACGAGGAATACAAGTGAAACAGATGAATTTGATGATGGAACCTtagattcaattaatttcagttCTGACTCTGAGGAAAAttcgtttgaaaattttgtgccattaaaagaaaaatcaacaaactgtattgatgaaaaaaaagataatatcgaaatgaaaaataattttcaagtagaaaatgaaaatgatattcttgaacaaaataaaatacatgatGATGAACATGAAGATACCAAAAGATATTTAGCTcaattgatgattattaaGCAAAAATGGGAAgcgattaaattgaaaaaagatttattgcAAAAAGAACTTGATAATTCATACATAGGAGATAATATCGAAAAATTATCCAGAATATTAGgcgagaaagaaaataatttagaagaATTTCAGGATTATCTTAAGCAGAAAGATATCGTTATTGCTCAATTAAAAGATCAagatataatatcattatatgAAAATCGTAATATTACATCAACGCACAATAAATTACCagatttaattgatgaaaatccATTAGATAGTttagatgatgataatttttttgattgtgaTTATTGTCCACAAATATTTTCCACTCGTGGTACACTCGAAGTTCATTTGAAGAGCCAcgattacaaaatatttgatttttgtgAGGATTGCGGTAGTGAATTTGCAAATAATAAAGCAAAACAAACGCATGATATCACgtgtaaaaagaaattattatgtaGATATTGTAATATCATGCTATATACAAAGGAAAGAAAACAGCAACATGAGCAATATCATTGTGATATCATTTTTGGTCAGATTTGCGACATTTGCGGTAACAGATTTAAATCTCAAGGTACTTTAAATCAGCATATAAGTACCCGACATACGAGTTGGAAAACTGTACTTAAATGTCCTAAATGCCCGGAGATATTCGCatctaaacaaaaattgacTAATCATGTAAAATTAGTTCATACATCATCACAAACttatttatgtgaaaaatGTGGTGATGATTTCAATAGCCTAGCATCACTTAGACATCATCGAATAGGAAATCATAAGTCAACTAATAATGAACACGAAAGTCCAGTTTGTCACAAGCTCCTTCCATCTTATAATTCGTCATACACAATGCAATGTCCTTATTGtgataaaatgtttgaaaaagaATCGACTTTGAAGCgacatataatattacatgaaGACCATCAGCGACAATATCTTTGCGATACTTGCGGTGTAAGCTTCAATCACCCTTACAAATTCCGCTTGCACATGAATATTCATGGAAAATCTGATAGTGCACTTGAAGAGTGTTCATGTCCAATATgcccaaaaaaatttccaaattattcaatgcTTGTACTTCATCAAGATTCAGTACACAAAGACGATAAACAATATACATGCCATATATGCAATAAGCCAATGCTGTCAATTAAATCTTTAAAGTGGCATATGTCATACACACATAATGAAACGCCAACGGGAATTGCACTGGACAATTCGAAAAATTCAGTTAAATTGAAAAGACTTTCTTGCAATCATTGTGATAAAACATTCAAGACAGCAAAGATTTTACGTgcacatattaaaaaaacgcACTCAGAAAGTAATCTAGTCAAGTGTTTGGAATGTGATTTGAGATTCATGTCAGAAGTTCGATTAAGACATCATATGATGATTGTTCATGATCAATTGGaagatacaataaaatatatgtgtgataTATGTGATaccaatttaaaaacaaagatTCGATTGATAAAACATCATCAGGATCAACATAGTGATGAGCGCCCGCTTCAGTGTCGCTATTGTGAATGGCGATGTAAACAAATTAGTGCTTTAGTTTATCATGAAAGAATTCATACCAATGAACTGCCTTATTCATGCATTGTATGTGAACAacgttttaaatattttaacgatAAACAAAAGCATGAAGAAAAACATGAAAGTCTCGACGGTGCAGGATTTGAAATGATTGTTGCTGatggaaatattgaaaattcaaaaaatcaagACGAGGAAGTTTCAGCATCAGAAAATGATCTATTAGAGCAGAAATATCAGGccattgatgataatttaactGATCAACACGATGAATATGACAGTCAATATAATGGAAAACAGATTATCGAGTTTGAAGAAcaggaaataaataacgaaaatcAACACCATATTCAAGAGTTAGATCAGGAGTATATGCAAGATATTCAACAAGAGATTGACGAAGAAGTTGATAACAAGACAGAGAACGAATATATTGACGAGATAGGCTTATATGATGAAGAGGAAAATTTGGAGCATCAACAATGGCAATATGAGAGAGAAACAGACacaaataatgattataagcaagaatataaacatgaatatgAATTACTTCCAGGGGAGACATTTGAAGCTTCAGAAGTTATTATGAATATGGAAGATGAAACAGTTTATACTGAAGAGGTGACGACAGACAATATTGAAAATGCAGAAATGACAGCAAAACAAACTGTACCTACAGAAACAGTTGTGCATATGCAACAACAAAACCACAAcaagaaaattcaaatgattccCCTTATGTCATCACTTAATGAATTGATTCGGCTGCAGAAATAA
Protein Sequence: MRDRWIEAMRCENFQPTQYTRICSKHFTPDCYVSKSPGSKKLLKKDAVPSIFDFPIHVIKGTTPRKLSESRLQPQNIEVQNENEPDKHTVTTNDKIFTEPLVNKKKASYVGNFKKRSYSTKDNRYKFMMNWVLTMKQKQIRKLQQHNRQLLKKVSNLNNSLKNLKRQQMINNNRSSELHGTIPVTRNTSETDEFDDGTLDSINFSSDSEENSFENFVPLKEKSTNCIDEKKDNIEMKNNFQVENENDILEQNKIHDDEHEDTKRYLAQLMIIKQKWEAIKLKKDLLQKELDNSYIGDNIEKLSRILGEKENNLEEFQDYLKQKDIVIAQLKDQDIISLYENRNITSTHNKLPDLIDENPLDSLDDDNFFDCDYCPQIFSTRGTLEVHLKSHDYKIFDFCEDCGSEFANNKAKQTHDITCKKKLLCRYCNIMLYTKERKQQHEQYHCDIIFGQICDICGNRFKSQGTLNQHISTRHTSWKTVLKCPKCPEIFASKQKLTNHVKLVHTSSQTYLCEKCGDDFNSLASLRHHRIGNHKSTNNEHESPVCHKLLPSYNSSYTMQCPYCDKMFEKESTLKRHIILHEDHQRQYLCDTCGVSFNHPYKFRLHMNIHGKSDSALEECSCPICPKKFPNYSMLVLHQDSVHKDDKQYTCHICNKPMLSIKSLKWHMSYTHNETPTGIALDNSKNSVKLKRLSCNHCDKTFKTAKILRAHIKKTHSESNLVKCLECDLRFMSEVRLRHHMMIVHDQLEDTIKYMCDICDTNLKTKIRLIKHHQDQHSDERPLQCRYCEWRCKQISALVYHERIHTNELPYSCIVCEQRFKYFNDKQKHEEKHESLDGAGFEMIVADGNIENSKNQDEEVSASENDLLEQKYQAIDDNLTDQHDEYDSQYNGKQIIEFEEQEINNENQHHIQELDQEYMQDIQQEIDEEVDNKTENEYIDEIGLYDEEENLEHQQWQYERETDTNNDYKQEYKHEYELLPGETFEASEVIMNMEDETVYTEEVTTDNIENAEMTAKQTVPTETVVHMQQQNHNKKIQMIPLMSSLNELIRLQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01001398;
90% Identity: iTF_01000621;
80% Identity: iTF_01000621;