Maet008128.1
Basic Information
- Insect
- Microctonus aethiopoides
- Gene Symbol
- -
- Assembly
- GCA_030347275.1
- Location
- JAQQBS010001422.1:1659192-1662961[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.73 66 4.2 1.1 1 23 467 489 467 489 0.84 2 15 0.0018 0.16 12.4 1.8 2 23 500 522 500 522 0.94 3 15 8.5e-05 0.0077 16.6 0.1 1 23 529 551 529 551 0.98 4 15 4.5e-06 0.00041 20.6 2.6 1 23 557 579 557 579 0.96 5 15 0.00022 0.02 15.3 4.3 1 23 588 610 588 610 0.97 6 15 3.4e-06 0.00031 21.0 0.8 1 23 616 638 616 638 0.98 7 15 2.1e-06 0.00019 21.7 0.1 1 23 643 665 643 665 0.98 8 15 0.032 2.8 8.5 4.5 1 23 672 694 672 694 0.98 9 15 0.0013 0.12 12.8 0.2 2 23 714 735 713 735 0.97 10 15 0.00024 0.021 15.2 1.0 2 23 743 765 742 765 0.96 11 15 0.004 0.36 11.3 0.1 1 23 771 793 771 793 0.98 12 15 0.0033 0.3 11.6 3.5 1 23 799 821 799 821 0.98 13 15 4.9e-07 4.4e-05 23.6 0.5 1 23 827 849 827 849 0.98 14 15 4.2e-06 0.00038 20.7 0.8 1 23 855 877 855 877 0.97 15 15 0.0036 0.32 11.5 0.7 2 23 884 906 883 906 0.93
Sequence Information
- Coding Sequence
- atgaaaattatttgtgcaGCACCATCATGCAAATATTCTGATGAAAATGTGGACTCAAgcgatattattttcatcagttTTCCTAACGATGACACGTCGACAATTTGGGCACACAATTGTAGTCGGCCAGATCTTATGATTAAATCAAATGAAGAATtacatatgaattattatgtttGTTCAAATCATATTGAAGATCGTTATTATTTGAGTAAAAcaaatcatatatttattgcacaaGGTGCAATACCaacattatttcaatcatCGGATAATCAATCACCAGAACATTTTACTTCATTAAAAGATCAATATTCAACTTCTGATCATGTTATAAATTCTCTACAATTAAATGATTGTATTGATACGGTGAATAGTAATTGTCCAtcgaattttattgataatacaaGTTCTGATTATCAAACAACAATTTATAATGCTGAATTGCATAATCCAaacaatgatattaataatgatgctGACAAAGATGAAGATCAAcacattaataatgataatagtacgaatttttgtaatattaatatgaatatagatcaattgaataatatgacAATACGATTTACAAATGTATGTCGCATTTGTGGACAATCAATGGATGATGGAATTGATATTATTGGTGAACGTggaattcaaacaaaattgaaagaCAAAATCCATTTGCATTTACCAATATTCATTGatgttaatgataatgatgatctTTTGCCATTGAAAGTATGTTTAGATTGTTGTGagaaattggaaatatttcattcatttgttgttACATGTTTACAAACAGATATAagattaagaaaatatttcaatcttcCTAGCAAgTACAATCATGAGGATAAATTCCGTGAGATAATATCCGCTAATgagttggaaataaataatgaaatgtgtACGGGTACTTCAACTATTGAACAGTCAACTATTATTGCTGATAAACCAGAAAATTCAACTCCAGTGTCTGAAGATTTTAATGTAGaacttgataaaaattcattcacacATGAAATATCGAATGATCAATCAACCATACATTATTGCGAGAATAATTCAACACCATCGGTATCATCAAAAATTGAAAGTCGCTTAAGATTTATCACACACACGGATTTAAACAATCTGATATTGCAACCATTACAAtcgttaaataattcaaatattaaaaatcaatcgTCTGATCCATTAGTTGGTGAAAATATTGAACGTAATATTATTAGAGAAAATGAATCACTCAATTGTTTAGAGAGTACGAATAGCGATGATGAAACATTGACATTGGTGGAAAATAATACTCAAATAATTTGTGCAATAAGTGatcaatcaatttttgaaaCTAATAAATCCATAGAGAATGATGAAATTGTACAAGAGGAGcaagtgaataaatttaattgtaaaaaatgtgttgaaacatttgataaatatgaagaattgCTGTTTCATGAACAATTACATccggaaaataatattacacagCAAAAACGACGATGCGGACACTGTTCACTTGAATTCATTAATCGCAAACAATTGCAATCTCATATTTTAGAAAAACATACTGGTCAacaaatgttatttaaatgtggTTTGTGCGATAAAGTTTATGAAAAATGGTCAAGTTTAGATGTCCATGAGGCTACACATCGACAGGATAAACCATACTTATGTGATTTATGTGGAAAGAGCTTTAAACATTCCAATAATTTACGCGGTCATAAGAGAATTCATCtggatataacaaaaaaaaaacgtcatGTTTgtgaaatttgtaaaaatgcatTCAGATCaagatTTCATCTACGAGAACACATGAATCAACATAATGGCAATAAACCATACATATGTGAACAATGTGGAAAAGCATTTTCAAAACGAATACAATTACGACAGCATCGTTTATCTCatggattaaataaatacgcaTGTCCCATTTGTGGAGTTGCGTTTAATCGTAGAGGAAATATGAATACACATTTGAAGAGACATGACAATAACGAAGGAATGTATACGTGTAGCGTATGTTCTTCTCGCTGTAAATCCatgagtgaattaaaaatgcatCGCAAACAACATTCAGAAAATGATATAATGGAGAGTATTAAAAGACGATGTAGCGACAAAACAGTTTGGGAATGTAAAAGTTGTAGTAGAATATTTCCAAAACGCGCGGCATTATTGAGCCATGAACGTACgcataataatgaacaaatggGAATTGAATGTGATAAGTGTGGTAAAAAATTagcgaataaaaattcattgaaatatcatACAAAATCAATGCACACTACGGAACGACCGTACGTTTGTCAATTTTGTGATGAATCATATGTTTCAAAAGAAGCACGATTAATACATGAAAGAATACATACTGGTGAACGAccatatatttgtaaattgtgCAATATGCAGTACCGATGCTCGAGTAATCTTAGTCAACACATGAAAGTCCATTCAAAAATACGACCATACGTATGTCAATATTGTGACAAATCATTTACTCGCAAGGGTGCAATGACTGTTCATGAACGAATTCATACGGGCATTAAACCATTTGCATGTGATgtatgtgataaaaaattttcgcaaaaaaatgatatgataAAGCATGCGAAAACACATGATGGTAAATTGTCACTGCGTTGCGAAGAgtgtaatgaaatattttcatctaagACTGAAATTCGCGAGCACTTCCAGAATTTTCATAAGCCAATTATCATTAATCGTtctgttattaataatgatattaaatag
- Protein Sequence
- MKIICAAPSCKYSDENVDSSDIIFISFPNDDTSTIWAHNCSRPDLMIKSNEELHMNYYVCSNHIEDRYYLSKTNHIFIAQGAIPTLFQSSDNQSPEHFTSLKDQYSTSDHVINSLQLNDCIDTVNSNCPSNFIDNTSSDYQTTIYNAELHNPNNDINNDADKDEDQHINNDNSTNFCNINMNIDQLNNMTIRFTNVCRICGQSMDDGIDIIGERGIQTKLKDKIHLHLPIFIDVNDNDDLLPLKVCLDCCEKLEIFHSFVVTCLQTDIRLRKYFNLPSKYNHEDKFREIISANELEINNEMCTGTSTIEQSTIIADKPENSTPVSEDFNVELDKNSFTHEISNDQSTIHYCENNSTPSVSSKIESRLRFITHTDLNNLILQPLQSLNNSNIKNQSSDPLVGENIERNIIRENESLNCLESTNSDDETLTLVENNTQIICAISDQSIFETNKSIENDEIVQEEQVNKFNCKKCVETFDKYEELLFHEQLHPENNITQQKRRCGHCSLEFINRKQLQSHILEKHTGQQMLFKCGLCDKVYEKWSSLDVHEATHRQDKPYLCDLCGKSFKHSNNLRGHKRIHLDITKKKRHVCEICKNAFRSRFHLREHMNQHNGNKPYICEQCGKAFSKRIQLRQHRLSHGLNKYACPICGVAFNRRGNMNTHLKRHDNNEGMYTCSVCSSRCKSMSELKMHRKQHSENDIMESIKRRCSDKTVWECKSCSRIFPKRAALLSHERTHNNEQMGIECDKCGKKLANKNSLKYHTKSMHTTERPYVCQFCDESYVSKEARLIHERIHTGERPYICKLCNMQYRCSSNLSQHMKVHSKIRPYVCQYCDKSFTRKGAMTVHERIHTGIKPFACDVCDKKFSQKNDMIKHAKTHDGKLSLRCEECNEIFSSKTEIREHFQNFHKPIIINRSVINNDIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01002263;
- 90% Identity
- iTF_01000605;
- 80% Identity
- iTF_01000605;