Basic Information

Gene Symbol
ct
Assembly
GCA_030347275.1
Location
JAQQBS010001423.1:1239095-1258611[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-27 5.1e-24 84.0 0.0 2 72 456 527 455 532 0.95
2 3 2.5e-32 1.1e-28 99.0 0.0 3 77 874 949 872 951 0.96
3 3 2.2e-29 9.3e-26 89.6 0.1 3 76 1116 1190 1114 1193 0.96

Sequence Information

Coding Sequence
ATGCTTTTATATCGATTGAGCTTTCTTTCCCATGCTGAGCTTTTAATTGGCATTCTCTTGTGGGCGAGAGAAGAGCAAATCAGCCAATTGGTGGAGGAGGTTTCTAGGTTACAGCAGAGCTTGCAGCGAGTTCAGGAAACAAATGCTCAGGCAACAGCACGTTTAGAAGAAGAATTAGAGACTCGTAGACAGCATATAAATCGATTGGAGAGTAAACTTGAACGACAGCGCGATTATGATGATTTAAAACGTGAAATAAGTGTTTTAAGATCAGTTGATTTATCGCAAATACCAACGGGCGAACCTGGAAAAAGTTTGGAGCATTTGTTAATGGAAAGAACAAAAGCACTGCAACAAGCTGAAACATTAAAGCCACCAAGCACACCAGACACACTCGGTGGACTAGCTTCGCCCCTGCAGCGCGCCGCAACTGCTTCGCCCCATGGCAGTGTCGGCGGAAGCGGTACCCCCGCGTCAATTGTAACCACCCAACAGGCGCTCCCAACGCGCTCCACCCCAACGCCCTCATCAGTAACCTCAACAGCCACCTCAAATCTCCTATTTCCACCACCTCTCCAAAATGTTGAGACATTTGGATCCTTTCTGGGTGAGGAAATAGTCGCTAATTGGAGGCGATCATTGGAAcgttcaataataaatcaacaacaacaacaacaatcacAATCGTCAATTGTACCACAATCCCAATTATCCCAGCTCCAAACGAGTACAACTGTCCAACAAACGttacaacaacagcaacatcaGCAACAGCAGTTACACCAATCAtcaatacataatttacatCCACCAACAACACCAAATCTAAATCACCTTCCATCACCAACAGATCcaacctcatcatcatcatcgtcaatcAACAATCCAGTACCAGCCAAATCCTGTACGCCATTATTGGGTGGATCGGAATCTACGGAAAAATCACCAACTCCATTATCCGGAAATGAAACACCAGCGCCACCAACTTCATTATCAACTGTAGCCTTGACATCGCCAACTGTTACTCATCAATTGTCATCAGTAATGTTGGATAATAATACCAGTATTAATGGGACAACACTATCAAATATGACCAATCATCCACCTAAAAGTCCACATGAAGAATCATgtcataacaataataatagccATCATTtggctaataataatattggtgGATTGAGTGTATTGGATACTATTAAAGGTCCATTTAGGTTTGATGATAGAACACATCCCTTTCGATTTGGTGATGAATTCGGTGCGGCCGGTATGGCTGGACGTTTAGGCGAATCATTAATACCAAAGGGCGATCCAATGGAGGCTCGTTTACAGGAAATGTTACGTTACAATATGGATAAATATGCATCACAAAATTTAGATACATTACATATTGCACGACGTGTTAgagaattattatctattcatAATATTGGACAGCGTTTATTTGCTAAATATGTTCTTGGATTGAGTCAAGGGACAGTGAGTGAATTATTGAGTAAACCTAAACCATGGGATAAATTAACTGAGAAAGGACGTGACAGCTACAGAAAGATGCATGGTTGGGCGTGTGACGAGAATGCTGTGCTGCTACTCAAGTCCCTGATTCCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAAGGATTACCAGCATTTGCACGTGGACCACAGGATGGAATTAGTGGCGGTGCTGCTGATATTAATGATGAGAGAATTGCTCATATGCTGTCGGAATCGAGCCATTTACAATTGAGTCGTGAGCACGATACGTCAAATGATGCTGATAGTAAAAGTCCAAGTCGTTTGGGTTGTCCTAGTCCATTTGGAAAAGACAGATTCGACAGTCAAAATcgtagattaaaaaaatatgaaaatgatgatattCCACAGGAGAAAGTTGTGAGAATTTATCAGGAGGAATTGGCAAAATTAATGGGACGAAGAGTTGATGATTTACGTGGACCACGTGACTTCCCACCAagTGCGATGTTTCCGCATTTTTTCAGTGGGGGACAAAATATCCAAGGAATGGACCGGACTCAAGACGATTTTCGTCTTGCATTAGATGCATATCATCgtgaattacaaaaattaaattcagcaCCAGGACAAACTCCTGCAAGTTTAGCTGGATTACCAGGTCTACCAAATTTACCAGGACTTTTGGCATTACATCAGCAGGCATTACATCAAAATCATTTATCAGCTAATGGTGGCACTGGCGCTGGTGTTCAAGATTTAAGTCTTGGTAAAGCTGCTGCTGATCCACGtagtaaaataatgaatggcGTTAGCGATgaggataaagaaaaaatggaaGAAGCAATGCGACACGCAGGCAGTGCATTTTCATTAGTGAGGCCTAAACAAGAGCCAACTGGTGCACAATCAACGCCAGGTGGATCAAGTGCAAGCTCACCATTAGGTAATTCAATATTACCACCAGCAATGACACCAAGTGATGAATTTACTGGCGCTGCTGCAGCAAGTCCATTACAAAGAATGGCATCAATAACTAATAGTTTGATAAGTCAACCGTCCACACCAACGCATCATTCAGCAAATCAACGACCATTAAAAGCTGTATTACCACCAATAACACAACAACAATTTGACCTTTACAATAATCTCAACACGGAGGACATTGTGAAGAGGGTAAAGGAACAATTGTCACAGTATTCAATTTCACAACGATTATTCGGCGAGTCTGTGCTTGGATTATCCCAAGGATCTGTCTCGGATTTATTAGCGCGACCAAAGCCATGGCACATGCTAACGCAAAAGGGACGCGAGCCATTTATACgtatgaaaatgtttttggAGGACGAACAGGCTGTACATAAATTGGTTGCGagtcaatataaaattgcgCCGGAAAAATTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGTGGAACGCCAATGAAACCAATGCCACCGACGAAATTAGTTCAAGAGCAGCTACAAAATGCAGCAAAGGCCCAAGCGGCTGCAGCGGCCCAAGccgcagcagcagcagcagcggcCGCACAACATCAACAGGAATCGCAAATGCAATTGGGACCACCACAACCAAGTCCGCAGCAACATTCACAGCATTCACAGCCGCCATTACCGTTGATGTTAACGCCACCGGGTCCACATTTATCTCATGGACAATTGTCCATTCAAGAATTACAAAAgaaacagcagcagcaacaacaacagcagcaacagcaacagccaCAACAGTTAGGCCTACATTCACCTCATCAAATGGCGCAATCACCGTTGCGTAGTCTTCATCCTCATATTTCACCGAGTGTTTATGAAATGGCGGCGTTAACGCAAGAGCTCGATACACAAACGACAACGACAAAAATAAAGGAAGCTTTATTGGCTAATAATATTggccaaaaaatatttggcgAGGCCGTATTAGGTTTATCTCAGGGTTCAGTTAGTGAATTATTGAGTAAACCTAAAGCGTGGCATATGCTAAGTATTAAAGGACGTGAGCCATTTATAAGAATGAAATTATGGCTATCGGATCCGCATAATATTGAACGACTTCAAGCGCTAAAAAATGAAAGACGTGAAGCAAATAAACGTAGACGCAGCAGCGGTCCAGGATACGACAATAGCTCTGATACATCAAGCAATGACACTGCTGAATTTTATCACGCATCATCGCCTGGTCCTGGTCCACCATCAGCAAAAAAACAACGTGTATTATTTTCCGAGGAACAAAAAGAAGCATTGAGACTTGCTTTTGCCCTCGATCCATATCCAAATGTTGCGACGATTGAATTTTTAGCCGGTGAATTGGGTTTATCGTCACGAACAATTACCAATTGGTTCCACAATCATCGTATGCGATTGAAACAACAAACGCCACATGGACAGCCAGAGTCTGCATCGCCACGTGAGCCTGGTCAGCCATTTGATCCGGTACaatttcgtttattattaaatcaacgaCTTTTAGAATTGCAAAAAGAACGTTTGGGATTGGGTAATATGCCAATACCTTATTCGCCATATTTCAATCCGAATTTAGCGACATTAATGAGCAATGCCATTAAGGAACAGTGTTCGGGATTGGATTTGTCAATGGGAGCATTAAAGCGCGAATTAAATCAAGAATTTGAGGACGATGACGGGGACGGTGACGCGGATGGCGATGATGGAATGAGCAATCTTGGTAGTGAGGACTCGGATGGCTCTGGCGGAAGTATAAAACGTGAACCAAATGATCAAGCGTCAAATTTATCAACGCCAAGCGGTGCTGGTGGCGTTGGCGGTGGTGGAGGCAATGGCGGAGTTGGTGGATCGACAACTGGCGCAAGATCTAATCGAAGAAAACCCGCGGCACCACAGTGGGTTAATCCAGAGTGGCAGGAGCCAACGAGAACTGGTGATGAAGTTATAATAAATGGTGTGTGCGTTATGAAAACTGATGATTTTGGTGTTAAAAGAGAAACAGAGGAGACAATTAGGGTAGAACCAACACCGGTACAGGACAGATATGACGATGATAATCAAAGTGATGTTTCGTCTATTGTATCGGGACCTGGTGGAGGTAGTCGAAGTGGTGGTGGTGTTACTAGTGGTGGTAATGGACATCAGGAGAATGAACGTGATAGTGTTAGTCCATGTGGAATTAAATCCGGTGGTGATTTAAGTCCTGTTGGCTCGCCAGCGTCGCGACCACCGTCAGAAACACAACAAATACTTCAGAATTCTACAAATGTTGATAGTCCGAAAGAAGTGAAACATGAGCCGGAAGAAACGTGGGATTATTGA
Protein Sequence
MLLYRLSFLSHAELLIGILLWAREEQISQLVEEVSRLQQSLQRVQETNAQATARLEEELETRRQHINRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERTKALQQAETLKPPSTPDTLGGLASPLQRAATASPHGSVGGSGTPASIVTTQQALPTRSTPTPSSVTSTATSNLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIINQQQQQQSQSSIVPQSQLSQLQTSTTVQQTLQQQQHQQQQLHQSSIHNLHPPTTPNLNHLPSPTDPTSSSSSSINNPVPAKSCTPLLGGSESTEKSPTPLSGNETPAPPTSLSTVALTSPTVTHQLSSVMLDNNTSINGTTLSNMTNHPPKSPHEESCHNNNNSHHLANNNIGGLSVLDTIKGPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKEYVSGKEQGLPAFARGPQDGISGGAADINDERIAHMLSESSHLQLSREHDTSNDADSKSPSRLGCPSPFGKDRFDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVDDLRGPRDFPPSAMFPHFFSGGQNIQGMDRTQDDFRLALDAYHRELQKLNSAPGQTPASLAGLPGLPNLPGLLALHQQALHQNHLSANGGTGAGVQDLSLGKAAADPRSKIMNGVSDEDKEKMEEAMRHAGSAFSLVRPKQEPTGAQSTPGGSSASSPLGNSILPPAMTPSDEFTGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDEQAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAAAQAAAAAAAAAQHQQESQMQLGPPQPSPQQHSQHSQPPLPLMLTPPGPHLSHGQLSIQELQKKQQQQQQQQQQQQPQQLGLHSPHQMAQSPLRSLHPHISPSVYEMAALTQELDTQTTTTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKAWHMLSIKGREPFIRMKLWLSDPHNIERLQALKNERREANKRRRSSGPGYDNSSDTSSNDTAEFYHASSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELGLSSRTITNWFHNHRMRLKQQTPHGQPESASPREPGQPFDPVQFRLLLNQRLLELQKERLGLGNMPIPYSPYFNPNLATLMSNAIKEQCSGLDLSMGALKRELNQEFEDDDGDGDADGDDGMSNLGSEDSDGSGGSIKREPNDQASNLSTPSGAGGVGGGGGNGGVGGSTTGARSNRRKPAAPQWVNPEWQEPTRTGDEVIINGVCVMKTDDFGVKRETEETIRVEPTPVQDRYDDDNQSDVSSIVSGPGGGSRSGGGVTSGGNGHQENERDSVSPCGIKSGGDLSPVGSPASRPPSETQQILQNSTNVDSPKEVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01001150;
90% Identity
iTF_01000438;
80% Identity
iTF_01000438;