Basic Information

Gene Symbol
Arid2
Assembly
GCA_030347275.1
Location
JAQQBS010001424.1:7873905-7888690[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-23 2.3e-20 72.7 0.0 1 89 15 101 15 101 0.95
2 2 5.9 1.3e+04 -3.4 1.7 2 27 1382 1411 1381 1418 0.71

Sequence Information

Coding Sequence
ATGGCAGAAATCCTCAACAAGGATCCCGTCACGTACGAAAGGGAGAGAGATAGTTTTCTCAGGGATCTTCATCACTTTCACGAGACTCGAGGaACATCGTTCAAGAAGTCACCGAGAATTAGCGGAAATGATATAGatctttatttactttatgttCTCGTGACTGCCCATGGTGGTTGGATAAAAgTGAATACGAGAAACGAGTGGTCCTCATTATGTGAACAATTTCACTTACCAAGTGCTTGCGTGAACAGTGGAGTTGGATTGAAGCAAATATATCTCCGatatcTTGATCGGTATGAGAAGGTTCATTTTCTTGGTGAAGATGGACATCAAGcggacgatgatgatgaagactCGAGACATCGAAAATGGTCGGCGAGATCGTTGCATTCAGTGCCACTTACGTACAATCATCATCAGCACAATGTTACAGAATCTCTTCGGGATTACAATGGGCTGTCATCAAATCTCTACAAGTCATCAAATTACGACAAGTTAGCGTTATCATTGCTTTCACCATTACCAAATGAACAAGATTTTGCAATAAATGTGTGTACATTGTTATCTAATGAAGGAAAACATACATTACGTCTGGATAAATATCCACgacttgtaaatattttattagcaCATGCAGGTGTATTTGATTCACCTGGTACGCGTCAATTGTTCATCGAGGTTTATTCACGTGTgcgaaattattcaataaattcattttggtCGGATGTATTAGATACAACAAATGCATTAGATCTCACTGATGAAAGAACATTTATGAAAAAACCATCAAATTGTTCGAATACATTTTCACGACGAAAAACATTGGAACGTGAACGAAATAAACGCGAGCAACAACAGCGTGACAGTAAAGTATCAACGACATCGACTGTTACTGCATCAATAACAACaacgacaacaacaacaacaacaacaacaacagcaatgTCAATAACGAGAGCAACAATAGATGAAGAATTAACAGCACCAGTTATTGAAGAGGCAAAGGATGAAATCGATGAAACACTTATGGAAATTGATAGCACAATTACAGACTGTCAAAGACTCGATATTGATGACATTACAATTTaccatgatgataataatttaatggatcaaaatcaaaattcaattaaatttgaagATGAAGACAAAGATTTATTTTGCATGGGACGAACGTTGGGCACACAAGATCCATATGGACAGCGTGTTTTACAAATAGCATCAATATTACGTAATTTAAGTTTCACACCAGAAAACGCTGTTATTCTCGGTAGAAATCGTTGTTTTTTGcgatttgtattattatgcGTGCGTGCACGATGGAGCAATTTACATCAGCTTGGTTTTGATATACTCGGTAATATTgccaatgaaataatattaaaagacGCTGGCGATAGAATAACAAATGGTATATTATCGTGTGTATCAAATGGAGTTGATTCATCAGAtcgttttattgttatatcgTGTTTAGaagtgttaaataaaataagccAACAAGATAGTAATGAAGAAATTGTGACCTTTGGTTTAAATGACAATGTTTATGATATGATATGTCGTTTTTTGGCATTAAGCGATATTGCACTGCTTGTTTATACATTAGAGTGTCTTTATGCATTAACATCGTTGGGTGAAAGACCATGCACGAGCGTCGCGCGGGTACGCGGTGCCATTGACACTCTTGTTGCACTTGTGACTGTTGAAGCCCAAAGTTATGGTCCAAAAGCATGCATATTGATGCGTGTTGTAGAAACAGTATCGACAGTATCATCTTCCGCgacatcatcaacatcaaataatacattaaataattctacagTGAATTCGTCAACAACAACTATTAACACTGCGAATACGACACCATTAATTACATCAAATTCCTCAGTTGTCACTACCTCAGTGACTTCAACATCAACCATCACAACAACATCAACACAATCAATAGCTACACCAATGGCCAATGGTGGTAGCAATACACCAACATCAATAAGTCCATCACCATCGCGACCAACAACGCCTGCAACTTCATTGTCAAAAGCTGCAGCAAACAAAGCGGCTGAAGCTGTTGCATCACTTCAACAACAACATGCGCATCAACAAATTATTCAGGAAAATGAACAATTTGCGTTGGGCTGGCTACGAGCGACTTTTGAACCAACTACTGGTGTGAAAATTGAACAGGAGGAATTATACAAAAAGTATTTGAGTTATTGTACGAAAATTGGTAGACGTGGAGTTATTGCACCGTTACATTTTCCACGATGTGTAAggtcAGTATTTGGTGGAACGATTGGACCAAATCCGTTGAAAGGTGAAAATACGGGCACGCAATACTACGAGGGAATAAAAGTGCGAGCAACGCCTGCGCCAATAACTTATCCGAGCCAAAATTCCGGTTTAATGAACGTCACAGCATCAGCATTCTCGTCGCcgctatcatcatcatcatcatcatcatcgccatcatcatcttcatcatcatcaacaacgaTTTCATCAACCACAACAACTAGCAATTCAACTCCAGTAAAGGTGCATCCCGTACAACAGCGTACAGTCGCGCCCATAAATTCAATTCCTGATAGCACGGCCCTAGATAACACATCCAAAAATGTTGTAACACCTGCATCTCCTATATTAAAGGCCCACTTGTCAGCCCCACCTAAACAATCCTCAAATACCCTTCAGAATCAACCTCAGAATACAGTCACCAAGGTTGATTCTAAAAGTCAGGTATCAGTGGCACATCCGCACTTGAGTCAAGCGTTGCTTGCAAGTGGCTctcaacaacagcagcaacagtcAACAAACCAAATAGCCAATAAGGATAGTGATAGTCGTGTTGGTGCAACATCaagttcaattataaaaagcCTACTGGCTACGAAGGTAACAATCAGCGGCGACTGCATGCCCAGTGCCGCTGCGACTTGTGTGTCTACCCAAAATGCCTGCGTAACAAATACTACTAGCATCGCATCTAGCATCAGTGTCAATCAACTAATAACAAACAATCAGGTCGCGCAACGTCAACAACAACAAAGGTTACTCCAGCAACAATTGTCGGGGATTGGTCAACCTGCAGCACCGACAGCAACACCAGCGACACAATTGCCAAATATTGCATTGAAAGCCCCCACAAATGCCAAATCAAAGATGATAACATCATCTGTCGTGCCCGTTAAAAAAGTCCAAAGGCTCAATGGGGCTAAAATAATAGTAACTAATAATTGTGATGTGAAGACtgaagtaaatgaaaatgatacaaataatcaaaatgcaGCAGTATCGACAATAACggaaaatcatataaatacaaatcaaaaaatatgtcGGCCACCAATATCAACaacattaatgaataaattaacatcCCGTTCAATATCAACACCAATGGCAGAGGACTCTGATTCAACAAATAACTCATTGGCGTCAAGCAGTGGAATTGGCGGTAGTCGAGATTGTTCCGGAGTCGGTGTAGAGGAAGAAAATTCATTAACAAGCTTCGAAGGTATATTGCTAAATGGTGGCGCACCAAGTAGTATCGAATTGGATGCACAAGATGATAATTCATCCAAAGATTCATCAAGTTTAAGTTCAAAGGAAAAGCCACTGCAAAGCTTGATGCTCGCCGATTTATTAGAGCGTAAAGTTGATAaagaattaatgatgaatggtatgttattaaaaaattcaattaatgatAAAGGTATTGATTTGATGGaaaatcatattaaaaaagtCCTGAAAGAATCCActgatataaaaatcaaaacgGAAATAAATGaggataatattttacaagcTGAAGTAACATCGGATGATGCATTAATAGAGGCACCAAGAGGAATAAAAAGAAGTTTGTCGGATTCAGAAGAAAATGGCCCAGAAAAAAAgccaaaatattcaaatggcACAACGTCACCAGAAGCAAGTATTGATGGTACAACTTTTGAGTCAGCGTTATCGAGTATAAAATCAGAGGAGCCAGATGAAGATAAAGATGGTGAAAAAGCAACAGTATCATCAACGGCAGCCAATCTTTATGCAGCATTGGCTGCAGATTGTATCGAAGatgatattgatattgttGACGAACCCATAAAACAGGAATGTTTGCCACTAATAAAAGAAGAATCACGATTCATTAATCAAACCgaaacatttaataatcaacaacaacaacaaccacAACAGCAGCTGCAGCAGCAACCGCAGATGCAAACTCAACAACAAATTCAAATGCAGCCTCAACCCCAACAATTAATTGTTGCGGCTCCAAGACAAATAGTTGTTCAACAAGCGATACAAACGAACAATCAAGTAATCATTCCAGGTCAAGTGAAACGTACAAACACGTCGCAACCTCAAGTTTTATTGCAACAAGGTGCTGGGGGACAATTGCAATATGTTGTATCGGGCGGTGTACCAGGACAAAATTATGTGTTGGCACAATCGCAAACGGCATTGGTTCAAGGCCAGCCTCAAACTGTATTAGTAGCGCAAACAACACAACAACAAGGCACCGGTgctaaaacaattattattcttcaaccACAATCAACAGCACAACAAAGTACACAGAAAGTAGTTGCGATGACACCACAAGGACAACAAGTTGTTGTAACACAAGTACCACGGCCAATTATACAGAGTTCAGCATTAGGAAATATCCCACCACCGTTAGTGCCGACCTCCGCAGCAATCCCACAAGCATCTATTATTGTTAACAGTTCGATAGcacaaacaaatacaaatactgTTACTGTTACTATTCCTGCGGTTACACAACAGTGCCAGAATTCTATTAATAGCGTGCCATCACGTGTAATTACACCGACACCAGCGTCAACTCCACCGCCCACTCGACCAACGACCCCTCATCAAGTTACAGTAACATCACATGCAGTTGCGCCGGTTGCGGTTAAACAGGCGTCAgttaaaattgtgaaaaattccAATTCAACATCGACAACGTTTGCATCAACCGAAAATGATAGCAAACCATCAACGAGtaatcaacaacaacagcaaggAACAGAAAACAAGactattactattaaaatTGATCCAAATTCGTACTTGTGTGAATGGCGTGGTTGtttgaaacaatttaaaacTGCTCACGAAGTATATCTTCATGTTTGTGAGGCGCATTGTCCAACGGGACCCGAtgaaattttgtgtctttGGGCAAGCTGTGACGGGCTTAAACGACGTAGATTTTCACTTATGACCCACCTTTATGATCGACACTGTCACGCTGAcAGTATGGCAATAAGAAGGAAACAATTAACAAGCACGGGAAAATCTGAAATATCAACTTCTACAGCGCCCACACCACCTCATCATCCTGGTTATGCACCCAATGCAGCTTTTCATGCAATAAAGAGACACGCACTCGAATTTGTAAATCCTAAAGAGTTAATGCAAAGGCCAAGCAAGCCGGCTGCCGTTATCGCGAGTTCTTCTTCTGTCCGGTCTGGTCAAAATCCTCCGTCAGAACAGGACGACAATGAGGGTCCTGTAACGAAAAGTATTCGCTTGACTGCAGCTCTAATTCTCCGAAACCTAGTCATATACTCTGCACATGGAAGAcgaCATCTTCGAGCATATGAACCACATTTGGCCGGTGTAGCTTTGAGCAACGTTGAGTCATCAAGGACAATTGCTCAAGTGCTTTATGATATGAATGATCAAAGTAACAGTAATCATAGGTGA
Protein Sequence
MAEILNKDPVTYERERDSFLRDLHHFHETRGTSFKKSPRISGNDIDLYLLYVLVTAHGGWIKVNTRNEWSSLCEQFHLPSACVNSGVGLKQIYLRYLDRYEKVHFLGEDGHQADDDDEDSRHRKWSARSLHSVPLTYNHHQHNVTESLRDYNGLSSNLYKSSNYDKLALSLLSPLPNEQDFAINVCTLLSNEGKHTLRLDKYPRLVNILLAHAGVFDSPGTRQLFIEVYSRVRNYSINSFWSDVLDTTNALDLTDERTFMKKPSNCSNTFSRRKTLERERNKREQQQRDSKVSTTSTVTASITTTTTTTTTTTTAMSITRATIDEELTAPVIEEAKDEIDETLMEIDSTITDCQRLDIDDITIYHDDNNLMDQNQNSIKFEDEDKDLFCMGRTLGTQDPYGQRVLQIASILRNLSFTPENAVILGRNRCFLRFVLLCVRARWSNLHQLGFDILGNIANEIILKDAGDRITNGILSCVSNGVDSSDRFIVISCLEVLNKISQQDSNEEIVTFGLNDNVYDMICRFLALSDIALLVYTLECLYALTSLGERPCTSVARVRGAIDTLVALVTVEAQSYGPKACILMRVVETVSTVSSSATSSTSNNTLNNSTVNSSTTTINTANTTPLITSNSSVVTTSVTSTSTITTTSTQSIATPMANGGSNTPTSISPSPSRPTTPATSLSKAAANKAAEAVASLQQQHAHQQIIQENEQFALGWLRATFEPTTGVKIEQEELYKKYLSYCTKIGRRGVIAPLHFPRCVRSVFGGTIGPNPLKGENTGTQYYEGIKVRATPAPITYPSQNSGLMNVTASAFSSPLSSSSSSSSPSSSSSSSTTISSTTTTSNSTPVKVHPVQQRTVAPINSIPDSTALDNTSKNVVTPASPILKAHLSAPPKQSSNTLQNQPQNTVTKVDSKSQVSVAHPHLSQALLASGSQQQQQQSTNQIANKDSDSRVGATSSSIIKSLLATKVTISGDCMPSAAATCVSTQNACVTNTTSIASSISVNQLITNNQVAQRQQQQRLLQQQLSGIGQPAAPTATPATQLPNIALKAPTNAKSKMITSSVVPVKKVQRLNGAKIIVTNNCDVKTEVNENDTNNQNAAVSTITENHINTNQKICRPPISTTLMNKLTSRSISTPMAEDSDSTNNSLASSSGIGGSRDCSGVGVEEENSLTSFEGILLNGGAPSSIELDAQDDNSSKDSSSLSSKEKPLQSLMLADLLERKVDKELMMNGMLLKNSINDKGIDLMENHIKKVLKESTDIKIKTEINEDNILQAEVTSDDALIEAPRGIKRSLSDSEENGPEKKPKYSNGTTSPEASIDGTTFESALSSIKSEEPDEDKDGEKATVSSTAANLYAALAADCIEDDIDIVDEPIKQECLPLIKEESRFINQTETFNNQQQQQPQQQLQQQPQMQTQQQIQMQPQPQQLIVAAPRQIVVQQAIQTNNQVIIPGQVKRTNTSQPQVLLQQGAGGQLQYVVSGGVPGQNYVLAQSQTALVQGQPQTVLVAQTTQQQGTGAKTIIILQPQSTAQQSTQKVVAMTPQGQQVVVTQVPRPIIQSSALGNIPPPLVPTSAAIPQASIIVNSSIAQTNTNTVTVTIPAVTQQCQNSINSVPSRVITPTPASTPPPTRPTTPHQVTVTSHAVAPVAVKQASVKIVKNSNSTSTTFASTENDSKPSTSNQQQQQGTENKTITIKIDPNSYLCEWRGCLKQFKTAHEVYLHVCEAHCPTGPDEILCLWASCDGLKRRRFSLMTHLYDRHCHADSMAIRRKQLTSTGKSEISTSTAPTPPHHPGYAPNAAFHAIKRHALEFVNPKELMQRPSKPAAVIASSSSVRSGQNPPSEQDDNEGPVTKSIRLTAALILRNLVIYSAHGRRHLRAYEPHLAGVALSNVESSRTIAQVLYDMNDQSNSNHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00996120;
90% Identity
iTF_01001870; iTF_01001041;
80% Identity
-