Basic Information

Gene Symbol
grh
Assembly
GCA_030347275.1
Location
JAQQBS010001425.1:6286271-6301082[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.072 6.2e+02 -0.6 1.8 92 151 72 129 64 138 0.62
2 2 1.9e-62 1.6e-58 197.5 0.0 25 221 518 716 504 718 0.92

Sequence Information

Coding Sequence
ATGGATGCCTGTGGCAATCCTGCATATCATTATATCACATCCCTTTCTTTCAAACGACAAAtAAGACGAAGCCGCTCGTCGTCGGACTGTGAGTCGGGTGTGGTGGGTGGTGTATCCGATCAGCAGGATTACGGCGCGGTGACGAGCGGCCGTGGTGGTGAATCAGTCAGTGGTGAAGACGAcgaacatcatcatcatcatcatcatcatcatcatcatcagcatcaacaacagcagcagcatcaccatcaacaacaacaacaacagcagcagcactCAGTTCAAACCGAGTCAGACGATCCTGAGGAAGCCCAAAAGCGTGTTGCTGCCGTGCAGGTGCAGGTGCAGGGTATGGAGGGCGATTGGAGGGCGTATTGTGAGCATCCATTGTCGGTTGCTACTGCGGCAATGTTAAATCTACAACAGCAGCATCAAGTTACAGCAGTATCAGGTCATCCTGATGAACAATCAGTTCCatatgtttatgaatattacaaattacCGGAAAAATCAACAGATGTTAAATTACCACCGTCACATGAGCTCTGGACTACtgGTGTTATGGGACAAAAATTGCTGGTGCAAGAAACTTCACCGTCAAATCGTCTTGATAATTCTGGTGGTGAAAGCGGAGGTACCGGTGaacttcatcattttttacatcaatatAATCAACAATCACCAAGCCCTAGCCAAAGTCTTCAAGGCGGTATATCACTTCCGTTGAGTCCTCAACCAACATCAGGAACAGGTATTGGTGGGGTCAAGAGAGAACCGGAAGACTTGTCCTCGTCTCGGGGGGCGCAACAAGCGAGTAAACGGCATAAACAGGCCCAACCGGATAGTCCAACACCACCGGGAATGTATCATCATCACCAGCATCAGTTacaagtgCAACAGCAGTATGGAAGTGGATACGATCCTTATTCGTCGTGTAGTCCACGATTATCAACGAATTATGGTACATCAGGATCATCAAATACAAATGGAAATGGCGGTAGTGGCGGCGGTGGAGGACAATCAACTCTTCATCAAGAAGGCACAGCAGTTTATGTTACTAGCGATGGTTTACCATCGCTTGCATCATCCAGTGCATCATCATTGCCGACAACAACAGCTTCATACACTAGGTATGAAGTTGTTCCAAGTTCATATGCAACAACACACGCAATAAGAACATCATCAAGTAGTAGTAAAGTATTGACTGTTGATTTACCGAGTCCGGATTCTGGTATTGGCGCTGATGCAGTTACACCACGACAAGATCATCATCCACCAACAGCCGTACATCAGTCGTCGTTTGATTATACGGAATTGTGCCCGGGGGGTGCAACAAATGCAACAACAGTTGTATTAGAAAGCGGCGCTGTGATACATCATCCGCCATTGCAATTACAATTACAACAAAATCATAATCAAACACAAGTTCAACGCGGTATTGTTAATACAAACGCAACAAATCCGCCGACAACGCCAAATCCACCAAGATCGCGACCATGGCACGATTTTGGACGGCAAAATGACGCGGACAAAATACAAATACCAAAAATTTATTCAGCGTATGGGTTCAAATATCATTTGGAATCACCAATCAGTACATCACAAAGACGAGAGGACGACAGGATAACGTATATCAACAAGGGTCAGTTTTATGGCATCACATTGGATTATGTTCCAGATCCGGACAAACCACTATTAAAAACTGGACAGACTGTTAAGagtGTAGTAATGCTGATGTTTCGTGAAGAAAAAAGTCCGGAGGACGAAATAAAGGCGTGGCAATTCTGGCATGGCAGACAACATTCGGTAAAGCAACGAATTCTTGATGCTGatacgAAAAACAGCGTTGGACTTGTTGGTTGCATTGAAGAAGTAGCGCATAATGCAATAGCTGTTTATTGGAATCCACTCGAGTCATCAGCGAagATTAATGTCGCGGTTCAGTGCCTGAGCACAGATTTTTCGAGTCAAAAAGGCGTGAAAGGTTTGCCATTACATATACAAGTCGACACTTATGAGGAACCGCCACCGCATGCACATACTTATACGCCACCATCTCATCGTGGATATTGTCAAATCAAAGTTTTTTGCGACAAGGGTGCGGAGAGAAAGACACGTGACGAGGAGCGAAGAGCAGCCAAGCGGAAAATGACGGCGACAGGCAGAAAAAAGCTCGATGAACTTTATCATTCAGTTACGGAGCgaagtgaattttattcaatggcAGATCTTCATAAACCGCCAGTTTTATTCTCTCCACCAGCTGAACATGCTATTGATAAAttCTCGACAATGGAATTGTCAGGATTTTATGGGGGCGGTGGTGGCAATGGTGGTGACACTGACACATCATCATTGAGTAATGGTGAAGGTGGTGGAATGAAAACTAGCGCAAGTAGTCCTTATCCAAGTTGCGGCAGACCAAGTTTACCAGcattaaaatttcacaatCATTTTCCACCGGATAATTTAACATCACTTCACGATAAGAAAGATTCATTATTAATGCAAGTTCAAGAGCTACAAGGCTCAGTGTTACAAAGTGTGCCGCAAAGTGCATTATCAGCTGGTGCACTTGTTACCGGAGTTGGGAATCGTTTGCATTTACAgcatcaacagcaacaacaacagtcGCATTTACGTGACGGTGAAGAGCGCGTGATGCTTTATGTGAGACAAGAATCAGAAGACGTTTACACACCACTTCACGTTTCTCCACCAACTACCCAAGGATTACGGAACGCTATTGAGTCAAAGTACAAAATTGCATCCTCGAGTATTAATAACCTCTATCGAAAAAACACAAAGGGAATTACAGCgaaaattgatgatgatatgaTACGATATTATGTGGATGaagatttatttcttctcgaAGTGAGTCATACGCCAACAAATTCAGATCAGTGTGCCGAGCGTAATAGAAGTCATCCCAGTTCGCCTGGTGACCCAGACGATCTAAATGAATCAACATCAATTGGTTACGATGTTACATTAATTGAATTGCCATCAATACAAACACAATTACCGCCACCATCGCCTATTGCCGTTAATCAACATGGACATATTCACAGCCATGTTCAGCACGAAGTGGCAAACACGTGa
Protein Sequence
MDACGNPAYHYITSLSFKRQIRRSRSSSDCESGVVGGVSDQQDYGAVTSGRGGESVSGEDDEHHHHHHHHHHHQHQQQQQHHHQQQQQQQQHSVQTESDDPEEAQKRVAAVQVQVQGMEGDWRAYCEHPLSVATAAMLNLQQQHQVTAVSGHPDEQSVPYVYEYYKLPEKSTDVKLPPSHELWTTGVMGQKLLVQETSPSNRLDNSGGESGGTGELHHFLHQYNQQSPSPSQSLQGGISLPLSPQPTSGTGIGGVKREPEDLSSSRGAQQASKRHKQAQPDSPTPPGMYHHHQHQLQVQQQYGSGYDPYSSCSPRLSTNYGTSGSSNTNGNGGSGGGGGQSTLHQEGTAVYVTSDGLPSLASSSASSLPTTTASYTRYEVVPSSYATTHAIRTSSSSSKVLTVDLPSPDSGIGADAVTPRQDHHPPTAVHQSSFDYTELCPGGATNATTVVLESGAVIHHPPLQLQLQQNHNQTQVQRGIVNTNATNPPTTPNPPRSRPWHDFGRQNDADKIQIPKIYSAYGFKYHLESPISTSQRREDDRITYINKGQFYGITLDYVPDPDKPLLKTGQTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHIQVDTYEEPPPHAHTYTPPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHSVTERSEFYSMADLHKPPVLFSPPAEHAIDKFSTMELSGFYGGGGGNGGDTDTSSLSNGEGGGMKTSASSPYPSCGRPSLPALKFHNHFPPDNLTSLHDKKDSLLMQVQELQGSVLQSVPQSALSAGALVTGVGNRLHLQHQQQQQQSHLRDGEERVMLYVRQESEDVYTPLHVSPPTTQGLRNAIESKYKIASSSINNLYRKNTKGITAKIDDDMIRYYVDEDLFLLEVSHTPTNSDQCAERNRSHPSSPGDPDDLNESTSIGYDVTLIELPSIQTQLPPPSPIAVNQHGHIHSHVQHEVANT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00397041;
90% Identity
iTF_01001022;
80% Identity
-