Basic Information

Insect: Microchrysa polita
Gene Symbol: -
Assembly: GCA_949715475.1
Location: OX454418.1:10028603-10037559[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.091 9.1 8.1 0.8 2 23 556 577 556 577 0.92

2 10 0.0008 0.081 14.6 0.9 1 23 583 605 583 605 0.99

3 10 4.6e-05 0.0047 18.5 1.7 1 23 611 633 611 633 0.99

4 10 0.02 2 10.2 6.3 1 22 638 659 638 663 0.94

5 10 0.13 14 7.6 1.0 1 12 675 686 675 691 0.87

6 10 8.4 8.5e+02 1.9 1.4 1 23 1105 1128 1105 1128 0.93

7 10 0.014 1.4 10.7 4.0 2 23 1193 1214 1193 1214 0.96

8 10 0.0012 0.12 14.1 1.5 1 23 1220 1242 1220 1242 0.98

9 10 0.13 13 7.6 0.4 1 21 1274 1294 1274 1295 0.87

10 10 0.0013 0.13 13.9 0.1 2 23 1322 1344 1322 1344 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.091	9.1	8.1	0.8	2	23	556	577	556	577	0.92
2	10	0.0008	0.081	14.6	0.9	1	23	583	605	583	605	0.99
3	10	4.6e-05	0.0047	18.5	1.7	1	23	611	633	611	633	0.99
4	10	0.02	2	10.2	6.3	1	22	638	659	638	663	0.94
5	10	0.13	14	7.6	1.0	1	12	675	686	675	691	0.87
6	10	8.4	8.5e+02	1.9	1.4	1	23	1105	1128	1105	1128	0.93
7	10	0.014	1.4	10.7	4.0	2	23	1193	1214	1193	1214	0.96
8	10	0.0012	0.12	14.1	1.5	1	23	1220	1242	1220	1242	0.98
9	10	0.13	13	7.6	0.4	1	21	1274	1294	1274	1295	0.87
10	10	0.0013	0.13	13.9	0.1	2	23	1322	1344	1322	1344	0.96

Sequence Information

Coding Sequence: ATGACTTCTGAAAGTGAAACCGAAATAGGAGACACAAGTAACAATGTTTCATTTAAATGGACCGATGAAATGACATTTGTTCTCCTCGACGCTTATTGCATGAGGAGACGCCTGTTTCTCGATCCACAAATTCGAAAAAAGGATTTGTGGTTCGATCTTCTGCTGGAAATGCATTTACGTGGCTTTCAAATTCCTGATACGGATGCACTTGACAGCAAAATGCGCAATCTGAAGAAACGATACAAAATAATCCAAGAACAACGACAGACCAAAGGACCGAAACCGATTAGGTGGAAATTTTTCGATAAGATGTATGAAATAACTTCAATTACCGCCTCTGATGCGAAGTCGGAGTTTGAATTAAACTGGACGCCTCCAATAGGTAGCAAACGGCCAGTAGTACGAACGGAAGAATATAGGTGGGAAGACGATGCCGTTGAATTGTTATTGGACGCCTATAAGAGAAGACGCGAACTGTTTCTGAATTCAGAGATAAAGAAAAGGGATTTATGGACTGAAATTCTACACGAGCTGCGGGCTGCAGGTCACGATGTGGAAAGTGTACATATGCTGGATGCGAAAATGCGAAATATGAAGAGAACCTATAGAAGAAAAAAACAGGAAATGTTAACCGGAGATTATACGGAATGGCGATATTTCGACCAACtcgacgaaattttttcaaatgaCAATATGGTTAACACTCTAATCGAACGCGCCGAGATACAAACTTCTGCAACAACCAGAGACCCAAAAACGCCGAGCGAAGATAATAAATGGGATCGAAAGGCAACGGAATTTCTCCTGGATGCCTATCAGCGAAAATTAGACCTTTTTCGTAATTCGAGAGTAAGTAGGAAggaattatggaaaaatatctGGCTTGAGATGAGAGCAGCGGGCTTTGTATATGAGAATATGGCTATAGTGGACAGGAAATTGCGAAATATGAAGAAAACCTATATAAGACACAAGGGAAGATTAGAAGAAGAGGGAGGCGAATGTAATTGGATCTATTTCGACAAAATGGACGAACTTTTCCGAGATGTCTATTTAGGTAAATTCTCATTTAGAAACGACGAAGAAGAAATGGTATCTTGCGACGAAAACACATATGAGTATGGTGGGTTGTATGCGTTAGTTAAACAAGAAATAAGCTCTCCAAAAAATGAAAACGCGCATTCCGCAAGTACAAAATCGAGAACTTTCACGAAAACTTCACGCGATTTAGATAGGAAACCTGGAACAAGCATCGCCTTTGAATTCATCACTACAACGTCAGATGGATTTGGAGCCGGCACGAACGTTAAAACCGAACCTATTGCGTGTGACACAATCGACGACAAAAGCGATGAGTATGATTGTGGTAAAATTCGCTTAAGTGAAGGCGgcaaatttatatttgtttgtgGTTTTTGTAACGAAGAGCATAAAAATATGATTGAGTTTGGGACACATCTTAAGAAACGACATGGAAACAAATTAAATTCAACAGATACACGGGAACCACCCGATGAATCAACCAATGAAGTTGAAGTTCTTTCAAACACACCATCGAATGAACTGGACGATCAGGATGTAACATTTTCGCTAAACGCAAGTGAAGTGATTTCCAAAAATAACGCAAACATGAATACCGATAGAATGATAGAACCGGCGGAGCGACAGTGTAAATACTGCGGCGAGGAATTCGCAACAAGAGTTCTATGCATGGAGCACGAAATAACTCATCCCGTCGATTCTGCCTATCAATGTTGGTATTGTCCAGAAAAGTTTCGTGATTACAAGAGACGCAATGCCCATATTAGAGTTCATACGGGTGAGCGGCCTTATAAGTGCAACGAATGTCTGAAAACATTTGCCCAAAAATGGCAGCAGCAGCGTCACGCCCGCACTCACCTCGAAAAAGAATTCAAGTGTCAGAAATGTGGCAAAGAGTTCTTTTCCAAAATTGGATTGCACTATCATCAGCGGCGAAACTGTCAGCATGAGGTGAAACAAGTTAAGGGCTCTGTTGGGTCATACGTCTGTGAACAGTGCGGAAAGACTTTTCAAACTTATTTTAAATGGAACGATGAAATGACATTCGCTCTCCTTGACGCTTATTGCACAAAAAGGAGCCTTTTTCTCGATCCACAAACTCCAAAAAAGGATTTGTGGTCCGATCTTCTGCAGGAAATGCATTCACGTGGTTACCAAGTTCCCAGTGCGGATGCACTCAACAGTAAAATTTGCAGCTTGAAGGAAAGATACAATGCAATTCTACAAATAATGTCTACTGGATCCAAGCCGGTTAAGTGGACATTTTTTGAAAAGATGTCGGAAATATTTTCAACTACCGCCTCTCTTGATAAGTCCGAGCTTGAATTCAACCGGACGCCTCCAGTTGGTGGCAAACCATACGTTGAATGGATAGAAGAATATAGATGGGAGGACGATGCCGTTGATCTCTTACTGGACGCTTATAGGCGAAGACGCCATCTCTTTCTATGCACCAAAGTAAAGAAGAAAGATTTATGGACTGAGATCCTACACGAGTTGTGGGCTGCAGGTCACGATGTGCAAAATGAGGCTATGCTGGACGATAAAATGAACAATTTGAAGAAAACCTACAGGAGAAAAAAACAGGAAATCTTAACCGGAGATTATACGGAATGGCGATATTTCGACCAACTCGACGAAATTTGGTCAAATGACGATCTGGTTAACTATTTGATCGAACGCGTCGAGAGACAAACTTCTGCAACAACGGGAGACCCAAAGGCGCCGAGCGAAGATAATAAATGGGATCAGAAGGCGACGGAATTTCTCCTGGATGCCTATCAACGCAAATTACATCTTTTTCATAGTTCGACGGTAAAGAAGCAGGATGTATGGAAAAATATTTGTCTAGAGATGAAAGCGGCGGGCTTTGAATATGAAAATATACACAGGAAGTTGCTAAATTTGAAGAAAACCTATAgaagaaataagaaaaaattagaAGCAAAGGGAGGCGTAAGTGATTGGTTGTATTTCGAcaaaatggaccaaattttCCGTGATGATTCCGCCTATGCACGCAAGTCCACAGTTACAAGCGACGAAGAAATGGTATCTTGCGACGAATTCTATTCGATTGTCAACACCTCACACGAACTAGATAGAAAACCTGAGACAGCCATCGCCTTTGAATTTATCAACACAACGCCAGTTCCATTCGGAGACAACACTGACGTCAAAACCGAACCGATTGTGAGTGAGACAATAGGCGACAAACGCGATCAGAATGATTGTGGTAAAATCCGCTTCAGCCTAGGCGGTAAATTTCTATTTGTTTGTGGATATTGTAACGAAGAGCATAAAAATATGATTCAATTTGGGGCCCATCTTAAGAAGCGACATAGaaacaaattaaattcaataggtACACGAAAACCACCCGACGAGTCGACCGATGAACTTGAAGTTTTCTCAAACACATTATCGAATGAAATGGGCCAGCAGGGTTCAACATTTTCGTTAAACCCAAGCGAAGCGAGTTGCGAAAATAACAGAAACATTAATAGCAATATAGTAATAGAACCAGTGGAGCGACAATGTAAATATTGCGGCGAGGAATTCACAACAAGAGCTCTGTGCATACACCACGAAAGAACCCACTTGGTCGACCCTCCTTTCCCATGTTGGTATTGTCCGGAAAAGTTTTGTGATTACAAGCAACGCAATGTGCATATTAGAATTCATAAAAACGAGCCGTCTTATAAGGAACGTCTAAAAACTTTTGCACAAAAATGGCAGCGACAGCATCCTTACTCTCGCAATCACCTCGATAAGGAATTCAAGTGTCAGACATGTGGCAAAGAGTTCCTTTCCAAAATTGGATTGTACTATCACGAGCGGGTGAAATGTCAGCAAAAAGTGAAAAACGAGGCCACCACTTTGTTCGCTCATTTAAATTTGCATTCATGGGACAAGTCAAATGTATGTGATATCTGTGGAAACGATTATGTTACGAGCACAGCACTGCAATCGCATTTAAGGTCATCGCATCGTGTCTTGCTGGCCATAGCGAAATAA
Protein Sequence: MTSESETEIGDTSNNVSFKWTDEMTFVLLDAYCMRRRLFLDPQIRKKDLWFDLLLEMHLRGFQIPDTDALDSKMRNLKKRYKIIQEQRQTKGPKPIRWKFFDKMYEITSITASDAKSEFELNWTPPIGSKRPVVRTEEYRWEDDAVELLLDAYKRRRELFLNSEIKKRDLWTEILHELRAAGHDVESVHMLDAKMRNMKRTYRRKKQEMLTGDYTEWRYFDQLDEIFSNDNMVNTLIERAEIQTSATTRDPKTPSEDNKWDRKATEFLLDAYQRKLDLFRNSRVSRKELWKNIWLEMRAAGFVYENMAIVDRKLRNMKKTYIRHKGRLEEEGGECNWIYFDKMDELFRDVYLGKFSFRNDEEEMVSCDENTYEYGGLYALVKQEISSPKNENAHSASTKSRTFTKTSRDLDRKPGTSIAFEFITTTSDGFGAGTNVKTEPIACDTIDDKSDEYDCGKIRLSEGGKFIFVCGFCNEEHKNMIEFGTHLKKRHGNKLNSTDTREPPDESTNEVEVLSNTPSNELDDQDVTFSLNASEVISKNNANMNTDRMIEPAERQCKYCGEEFATRVLCMEHEITHPVDSAYQCWYCPEKFRDYKRRNAHIRVHTGERPYKCNECLKTFAQKWQQQRHARTHLEKEFKCQKCGKEFFSKIGLHYHQRRNCQHEVKQVKGSVGSYVCEQCGKTFQTYFKWNDEMTFALLDAYCTKRSLFLDPQTPKKDLWSDLLQEMHSRGYQVPSADALNSKICSLKERYNAILQIMSTGSKPVKWTFFEKMSEIFSTTASLDKSELEFNRTPPVGGKPYVEWIEEYRWEDDAVDLLLDAYRRRRHLFLCTKVKKKDLWTEILHELWAAGHDVQNEAMLDDKMNNLKKTYRRKKQEILTGDYTEWRYFDQLDEIWSNDDLVNYLIERVERQTSATTGDPKAPSEDNKWDQKATEFLLDAYQRKLHLFHSSTVKKQDVWKNICLEMKAAGFEYENIHRKLLNLKKTYRRNKKKLEAKGGVSDWLYFDKMDQIFRDDSAYARKSTVTSDEEMVSCDEFYSIVNTSHELDRKPETAIAFEFINTTPVPFGDNTDVKTEPIVSETIGDKRDQNDCGKIRFSLGGKFLFVCGYCNEEHKNMIQFGAHLKKRHRNKLNSIGTRKPPDESTDELEVFSNTLSNEMGQQGSTFSLNPSEASCENNRNINSNIVIEPVERQCKYCGEEFTTRALCIHHERTHLVDPPFPCWYCPEKFCDYKQRNVHIRIHKNEPSYKERLKTFAQKWQRQHPYSRNHLDKEFKCQTCGKEFLSKIGLYYHERVKCQQKVKNEATTLFAHLNLHSWDKSNVCDICGNDYVTSTALQSHLRSSHRVLLAIAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -