Basic Information

Insect: Microchrysa polita
Gene Symbol: grau
Assembly: GCA_949715475.1
Location: OX454419.1:74976046-74979369[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 6.7 6.8e+02 2.2 1.5 2 23 310 332 309 332 0.94

2 10 0.049 5 8.9 0.5 6 23 341 358 341 358 0.99

3 10 0.00075 0.076 14.6 4.1 1 23 364 386 364 386 0.99

4 10 0.0015 0.16 13.7 0.3 1 23 394 416 394 416 0.96

5 10 4.1e-05 0.0042 18.6 0.3 1 23 424 447 424 447 0.95

6 10 0.19 20 7.1 0.4 3 23 455 475 453 475 0.96

7 10 1.8 1.8e+02 4.0 1.8 2 23 484 506 483 506 0.95

8 10 0.00012 0.012 17.2 1.1 1 23 514 537 514 537 0.95

9 10 3e-06 0.0003 22.2 0.3 1 23 543 565 543 565 0.98

10 10 7e-05 0.0071 17.9 4.7 1 23 571 594 571 594 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	6.7	6.8e+02	2.2	1.5	2	23	310	332	309	332	0.94
2	10	0.049	5	8.9	0.5	6	23	341	358	341	358	0.99
3	10	0.00075	0.076	14.6	4.1	1	23	364	386	364	386	0.99
4	10	0.0015	0.16	13.7	0.3	1	23	394	416	394	416	0.96
5	10	4.1e-05	0.0042	18.6	0.3	1	23	424	447	424	447	0.95
6	10	0.19	20	7.1	0.4	3	23	455	475	453	475	0.96
7	10	1.8	1.8e+02	4.0	1.8	2	23	484	506	483	506	0.95
8	10	0.00012	0.012	17.2	1.1	1	23	514	537	514	537	0.95
9	10	3e-06	0.0003	22.2	0.3	1	23	543	565	543	565	0.98
10	10	7e-05	0.0071	17.9	4.7	1	23	571	594	571	594	0.98

Sequence Information

Coding Sequence: atgctTTGCCGTATGTGCTTGCTCGAGTCTGAGAATACGTTGTGCATTTTTGAGCATGACCCGGGACAGTTTCAAATAGCACCGACTATTGGTCGGCATTTTTGGTTCGAGCCATCGAAGGATGATCCAATTTCCATAATGATATGCATGACGTgctggtcaaaaatttccgatttTCATACGTACTATTTGAGCATTGAAGGGGCGCAGCGTCTATTGACTGAGTTCTCGTCAGTGAAAGAGGAGACTGAAATTGCCAGTGTTGAGCACTTGAAAAATGAATATGTCGACGAGTATTTGGATAAGAAAGACGATAATATTGCAAAGGATACAACTAAGAGTACAACGACGTCACAAACAGGCGCATCAGACGATAACTGCCCGGTGTTTGTGGACGTTGATCATGGTGAAAGCGATAACGATTCAGGAGATCCGATGCGGGAGTCTTTCGACGGCGACTACAGAGACGATGGACACGACAGTAGTATCTGTTCGTCAGATGAGGAACCCCTAGCCAAGAAAGTTGTACGCACAAGAGTACAATCTATTAAGAAAGAACCAAAAAAGCGTCGAAGTGGACGCACTAAGAATAACAAGAATATATGCAAAACGCTCGATGTTGTCACTTCTGACACTAAAGCGAAAAAAGGCAGAGTCCAACCGAAATCAAATCAAGTAATTCTTACTGACAATGATACATCAATTCAAGCtggtgaacagacggacgtCCAAATGAAATTGGAATTAAAGGAATCGTCGAGCTTCGATTCGTCCGAAGAAACGGATAACCTACAGCCGAAAGGACGTGACTCAAAAAAGAAATCAGGGAAAATAGAAACAATTAAACGTGTAAAGAAATCGCCTAATCTAGAgcatcagaaaaaaaataaaatgtacgaTGACGCAATTTCGCAATTTCTTAGCCTCCAATGTGAATTGTGCTCGACGCCATGTCAAAAATTTGCTGATGTTAAAGGCCATTTTCGAACAATGCATAATAAAAGGGGCTATGTCGTCTGTTGCACGAAGAAGTTCTACCAACGTGTTTATCTCTATGAGCACATACAAAAACATAAGAATCCGGAGACATTCAAGTGCAAGTTTTGTGACAAAGTGTACTGTAGTGGACAGGTACTGAGAAGTCATTTACGTACGCATGACGCTTCTTTCAAGAAACGGTATCAATGCGATATATGCGAACGACGATTTATTAATTTGTCGATTTTGAATAACCACAAAATTTTACATATGCCCAAGGAAGAACATGCCTTTGCGTGTGATGTTTGTGGCAAAACATTTCCATCTAAGAATTTAATGAATTCGCATAAGAGAGCGATACACGAAAGGGCGTACACACAAATATGTCACATTTGCGCTAAGGTTATCGTTGGCAAAACCCTCTTTACTCTACATCAGCAAGAGCATGCTGGCATTGTTGATGCTAAGGTTCAATGCGAGCAATGTGGCATGTGGCTTAAAAATACACATCGTTTGaaaattcatacaaaaaaaCTGCACGACAAAGACAATAGCGTCGAGCATATTTGTCATATTTGTCAGAAAGTTACGCCTTCGAGAAGTGCACTAACGGGCCACATTCGTTATGCACATGCGGGTAAGCCGAGATTCTCTTGCAATATATGTGGAAAGGCTTTCAAGATAGCGCTCAATTTGAAGGAACACATGACAACGCACACGGGCGATGTCTTATACACTTGTCCGCATTGCCCGAAAACCTTTAACTCAAATGCCAATAGGCATGCACATCGTAAAAAAATGCATCGTGAAGAGTGGGAGGAAAGTCGAAGAAGTCGCGGACTTCCCGTTAATACGAAGTAA
Protein Sequence: MLCRMCLLESENTLCIFEHDPGQFQIAPTIGRHFWFEPSKDDPISIMICMTCWSKISDFHTYYLSIEGAQRLLTEFSSVKEETEIASVEHLKNEYVDEYLDKKDDNIAKDTTKSTTTSQTGASDDNCPVFVDVDHGESDNDSGDPMRESFDGDYRDDGHDSSICSSDEEPLAKKVVRTRVQSIKKEPKKRRSGRTKNNKNICKTLDVVTSDTKAKKGRVQPKSNQVILTDNDTSIQAGEQTDVQMKLELKESSSFDSSEETDNLQPKGRDSKKKSGKIETIKRVKKSPNLEHQKKNKMYDDAISQFLSLQCELCSTPCQKFADVKGHFRTMHNKRGYVVCCTKKFYQRVYLYEHIQKHKNPETFKCKFCDKVYCSGQVLRSHLRTHDASFKKRYQCDICERRFINLSILNNHKILHMPKEEHAFACDVCGKTFPSKNLMNSHKRAIHERAYTQICHICAKVIVGKTLFTLHQQEHAGIVDAKVQCEQCGMWLKNTHRLKIHTKKLHDKDNSVEHICHICQKVTPSRSALTGHIRYAHAGKPRFSCNICGKAFKIALNLKEHMTTHTGDVLYTCPHCPKTFNSNANRHAHRKKMHREEWEESRRSRGLPVNTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -