Basic Information

Insect: Microchrysa polita
Gene Symbol: -
Assembly: GCA_949715475.1
Location: OX454420.1:59479523-59493893[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0017 0.17 13.5 6.8 1 23 370 392 370 392 0.98

2 10 5.4e-06 0.00054 21.4 1.4 1 23 398 420 398 420 0.97

3 10 7.5e-05 0.0075 17.8 0.1 1 23 426 448 426 448 0.97

4 10 0.028 2.8 9.7 1.6 1 23 454 476 454 476 0.98

5 10 1.4e-07 1.5e-05 26.3 1.6 1 23 482 504 482 504 0.99

6 10 0.00055 0.055 15.1 0.3 5 23 512 530 511 530 0.96

7 10 0.029 2.9 9.7 4.5 2 23 537 558 536 558 0.96

8 10 0.00014 0.014 17.0 0.9 1 23 564 587 564 587 0.97

9 10 0.0037 0.37 12.5 3.7 1 23 593 615 593 615 0.97

10 10 0.14 14 7.5 0.5 1 23 621 644 621 644 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0017	0.17	13.5	6.8	1	23	370	392	370	392	0.98
2	10	5.4e-06	0.00054	21.4	1.4	1	23	398	420	398	420	0.97
3	10	7.5e-05	0.0075	17.8	0.1	1	23	426	448	426	448	0.97
4	10	0.028	2.8	9.7	1.6	1	23	454	476	454	476	0.98
5	10	1.4e-07	1.5e-05	26.3	1.6	1	23	482	504	482	504	0.99
6	10	0.00055	0.055	15.1	0.3	5	23	512	530	511	530	0.96
7	10	0.029	2.9	9.7	4.5	2	23	537	558	536	558	0.96
8	10	0.00014	0.014	17.0	0.9	1	23	564	587	564	587	0.97
9	10	0.0037	0.37	12.5	3.7	1	23	593	615	593	615	0.97
10	10	0.14	14	7.5	0.5	1	23	621	644	621	644	0.95

Sequence Information

Coding Sequence: ATGGAGATTAATGAAGATAAGGAAATCATTATCTCGCGAGATCATTTTATAACGTCAGCACAAAAAATTGTCTTTCTCAAATATATGCAATTCAGTGCGGATTTCATTTCAAAGCCTCGCAATCATCCAAaacttttgaatttattgattGCCGACCACAATAAAGTGTGTGAATCCAAAGAGAACGAAGACATTGTTCGAATATTGGAATTATGGGTGGGAAATGTTCGATCTCGCTTTAATGAAATGATAACTACCAGaaaatCTTTTGCGTTTCCATCGGAGGACATTGAGTTGATAAGTTTATTGAAAGCAGACAAACAAAAGTCAAATTTAAATGAGTTTTCTTGCATTCTCGACCACCTCGAAATCGCTCACAGTTCTCCGAAATTTTGGTTAACAATCGCACTGGAAATGGAATCGTTTGGCACTaaaaaggatgaaaactactggaaaaatACTTTCGAGAAGTGGTGCAATAAAGTCAAGAGAAAACAACAAATACTCGATCAAATGGAACTGCAAGAGGCCGATCGTAATAGTTTTTTAAGTTCGCTTGAGTTACGTGCGCTACAAGTGCTTGGGAGTATCGAGGCCGAGGAAAAGAAAAAAGATAATACGTTTTGTCGAGTATGCCTACAAAgtaaggacgaaaatttgagaaatattcatGAAGTGCTGTCGGATGATATGACGCCGGCGCAGAAAATTTCGCAATGTGCAAATGTTGAAGAGGTTTCCGATGACGATAATTTGCCTCAATTTATATGTGAAAATTGTAATCAAATGCTAGAGATGGCCTACAAATTCAAAACATTATGTGAATACTCCGACCAGCAATTGCGCTTATTAGTGAAACGCAGTAATATCGAATATGAGGAGTTATTGTTGGAGGAAGGCGACGAAGAAGAGTATCAGGTACAAACCATCGAAGAAGAACTAGAAGAGATCGACGATAATGGCGATGAAAATCATGTGGAAATGAAATTGTGTTTTGAAAATGGGGAATTGGTTACAGAAGGCAGTATTATTGAAAGTGAAATGATCGACGAAAACAGTGCGACTGACGGCGGAGGTGTCATTAACGTAGCTGAAGATGTGGATGTACATCAATGCAAGTTTTGTTCGATAATTTGTTATAACAAGGATACGCTAAGGAAGCACATGAACACACATACAATATCCCGCCATCATCCGTGCGAAGTTTGTCAGAAAGAGTTCAGAACTAAGTTGGCCTTAAAGATTCACATGCGATCGCATACTGGTGAACGGCCATACGTGTGCGATGTTTGCGGCAAAGCTTTTACCCAAGATGCGACCTTATCGTATCATCGTGCCATACACACCGGCTCGAAACCCTATCATTGTACGCTCTGTGCCTATCAAGCGCGTAATGTGaacgatttgaaaattcacaTGAGAAAGCATACGGGTGCACGACCCTACAAATGTAAATTATGTCCGTCCGCATTCACCACCTCGAGCAACTTACAAAAACATATTCGTCGGCACACGGGAATAAAAAATTTTCAGACGTGCGGTAAGGCATTTAAAACCTGGAGTGCAGTAACAACTCATCGAACCACACATGCTTCCGATAAGACAATTCATTGCCAGCATTGTTCGTATAAAACGACGACAATTGCGAATTTGAAAATTCATAATCGCACGCATACGGGCATTCAGCCGTATCAGTGTAGTCAGTGTCCGTTAAAATTCAGCACGGCCAGCAATCGGCTGAAACATGTTAAGAATGTTCACGAAAAGTTAAAAACGCATAAGTGCACTACATGTTCGCGAACATTCTTCTCCCGCGAATCAGCCCGCAAACATATGGTGATACATACGGGTCTAAAGCCCTACAATTGTTTGGAATGTACAGTGTCGTACGGTTGGTATAATGGCCTTCAAAAGCATATGAAAACTCAACATCCGGGCGTTAAAATGCCAacggaaaaacactttttagatTTAATGGATAAAGAAAcgtaa
Protein Sequence: MEINEDKEIIISRDHFITSAQKIVFLKYMQFSADFISKPRNHPKLLNLLIADHNKVCESKENEDIVRILELWVGNVRSRFNEMITTRKSFAFPSEDIELISLLKADKQKSNLNEFSCILDHLEIAHSSPKFWLTIALEMESFGTKKDENYWKNTFEKWCNKVKRKQQILDQMELQEADRNSFLSSLELRALQVLGSIEAEEKKKDNTFCRVCLQSKDENLRNIHEVLSDDMTPAQKISQCANVEEVSDDDNLPQFICENCNQMLEMAYKFKTLCEYSDQQLRLLVKRSNIEYEELLLEEGDEEEYQVQTIEEELEEIDDNGDENHVEMKLCFENGELVTEGSIIESEMIDENSATDGGGVINVAEDVDVHQCKFCSIICYNKDTLRKHMNTHTISRHHPCEVCQKEFRTKLALKIHMRSHTGERPYVCDVCGKAFTQDATLSYHRAIHTGSKPYHCTLCAYQARNVNDLKIHMRKHTGARPYKCKLCPSAFTTSSNLQKHIRRHTGIKNFQTCGKAFKTWSAVTTHRTTHASDKTIHCQHCSYKTTTIANLKIHNRTHTGIQPYQCSQCPLKFSTASNRLKHVKNVHEKLKTHKCTTCSRTFFSRESARKHMVIHTGLKPYNCLECTVSYGWYNGLQKHMKTQHPGVKMPTEKHFLDLMDKET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -