Basic Information

Insect: Microchrysa polita
Gene Symbol: su(Hw)
Assembly: GCA_949715475.1
Location: OX454417.1:1092978-1095345[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0019 0.19 13.4 0.6 2 22 39 59 38 59 0.94

2 10 0.00013 0.013 17.0 0.7 2 23 107 129 106 129 0.91

3 10 7.9e-06 0.0008 20.9 1.9 1 21 164 184 164 185 0.95

4 10 3.4e-06 0.00034 22.0 0.5 2 23 198 219 197 219 0.96

5 10 6e-05 0.0061 18.1 1.2 1 23 229 251 229 251 0.99

6 10 0.00025 0.026 16.1 0.1 1 23 257 279 257 279 0.98

7 10 6.7e-06 0.00067 21.1 1.1 1 23 285 307 285 307 0.99

8 10 2e-05 0.002 19.6 0.6 1 23 313 335 313 335 0.96

9 10 0.0052 0.52 12.0 2.4 1 23 340 363 340 363 0.98

10 10 0.034 3.4 9.4 0.1 2 23 371 392 370 392 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0019	0.19	13.4	0.6	2	22	39	59	38	59	0.94
2	10	0.00013	0.013	17.0	0.7	2	23	107	129	106	129	0.91
3	10	7.9e-06	0.0008	20.9	1.9	1	21	164	184	164	185	0.95
4	10	3.4e-06	0.00034	22.0	0.5	2	23	198	219	197	219	0.96
5	10	6e-05	0.0061	18.1	1.2	1	23	229	251	229	251	0.99
6	10	0.00025	0.026	16.1	0.1	1	23	257	279	257	279	0.98
7	10	6.7e-06	0.00067	21.1	1.1	1	23	285	307	285	307	0.99
8	10	2e-05	0.002	19.6	0.6	1	23	313	335	313	335	0.96
9	10	0.0052	0.52	12.0	2.4	1	23	340	363	340	363	0.98
10	10	0.034	3.4	9.4	0.1	2	23	371	392	370	392	0.90

Sequence Information

Coding Sequence: ATGAAAACTTATTTGCCAACAGGTGGTGATGATATTGAATTAGTTTTGAAAACTGGAAATGAATCATCAGACTGCGATGATGGCGATGAATCGGTGCAAGAATCACAAGACCTTAAATGCGAGAAGTGCAATCGACGTTACAAGAATGTTCGGAGACTCCAAGCCCATATGGAAACTTGTGAAACAAAAGATGCTACCTGTGAGGAGTTAACGCTGgaacaaatttgcaaaatggaaatgGATGCAGATTCGTtagcgaaacaaaatatctgtttTTGTTGCGAAGAAAGTCATGAAACGGCCCAtTCGGGTCACATTCGTTGTCAGGATTGTCCGAAATCATTTAAAAATGTCGGTAGTTATAGACGACACGTTTCGTTTTTACATTCATCAATTGCGAATTCCCATCCGTGTCACATTTGTAATGCAAAATGTGCAACAGAAGTGATTTTGCATCATCACTTGGTCGCACACGAGACTGGCAAAAAATTTGCATGCGTAAAATGTGGCAAAGAATTTACTAGAAAATATCATCTAGTGCGTCATCAGAAATTCTCCAAATGTGATCCGTCGATCGCAAAGAAAACAACACCGTGCAATGTTTGTGGCAAGGAGTTCTATCGAATTGATAATCTTCGAACTCATCTTCGTCAACATATCGGAGAAAATAAGCCCACGACGGACTATCAATGTCCCTATTGTCAGAGATACTTTCAGGGAACGACGACATTGAATATTCACATTCGAACCCACACAGGCGAGAAGCCGTACATTTGTGATGTATGCCAGCGAGGATTTCCATCGCTTGGTGCCGTGAGAAAGCATCGACGATCACATACCGGCGAGAAGCCCTTCGAATGCAAAGAGTGTAAAAGAACTTTTGCCGCTAAAGAGGTCTTAAATCGTCACATGAAAACGCACACTGGCGAGCGCCCTCACGTGTGTGACATATGCTCAAAAGGATTCATCCAATCTGTTCAACTTAAAGCTCATATGTTTTTGCACGGAAGAGGCGgatttccgtgtgaaaaatgtaaCGTAAATTGTGACCGAAAGATGAATGTTTCTAACCACATGCAAACCTATCACAGCGCCaagaagaaaatatttgatTGCTTACCGTGTGAGATGATTTTTGAAAAGAAAGAGGAATTAGTAAAGCACATGGAAATTCATCGAGGAGATCtttttataaaatgtcgTGCTTGTTTAAAGAGATTCATCGACCTAGACAAGCATATAAGATGCCCCAAATGTACTATATGTGACGGTTTAGGCGATAAGGCCGAGCAAATCCCCCATGACCACAAAGAAAAATGTCGAAGGCCACCAGGCAGACCTCCAAAGCCAAAAGTAATACCTATTCCCATCTCTCCGGTGCAAGAAATAGAATCAAGCGACGAAGAAAAACCacgaaaattgaaagttctCACGTCaaaaccgaaagaaaaaaagCAGTCTGAAAAATCAAACCAACCCGTTGAACCGGGAGATCTTACTTTAGTAGCTTATGATCCGGAGAAAGATCATGCCGAATATAGATTAGAAATCGGAACTGAACCACCGACTGAAAATACTGTGCAGAAATGTGACGCGATTCCAGAATGCAACTGGTTGACCGATGATCAACTTACTGATCGTGTAACACAACTGCTCAATTTACTGCTCGATGCTGAGTTGTTATCGAGTTTTGGTTGGCCGAACGCATCGGTGGAACATGTTCTTAGTGCGGTTATACAGCAGTGCGACCATAAACCGGCGGACTATGATACCTGTCCAAACTATGGAACAAAAATGCGTGAAAATGCAAAACTCCTTATAACAGTTGTTGTCGATAACGATTCCACTAAGAATTTGCTTAATAATCACACAATCGATGAAGTGATCATGCAAATCATCGACATGACACACAAATAG
Protein Sequence: MKTYLPTGGDDIELVLKTGNESSDCDDGDESVQESQDLKCEKCNRRYKNVRRLQAHMETCETKDATCEELTLEQICKMEMDADSLAKQNICFCCEESHETAHSGHIRCQDCPKSFKNVGSYRRHVSFLHSSIANSHPCHICNAKCATEVILHHHLVAHETGKKFACVKCGKEFTRKYHLVRHQKFSKCDPSIAKKTTPCNVCGKEFYRIDNLRTHLRQHIGENKPTTDYQCPYCQRYFQGTTTLNIHIRTHTGEKPYICDVCQRGFPSLGAVRKHRRSHTGEKPFECKECKRTFAAKEVLNRHMKTHTGERPHVCDICSKGFIQSVQLKAHMFLHGRGGFPCEKCNVNCDRKMNVSNHMQTYHSAKKKIFDCLPCEMIFEKKEELVKHMEIHRGDLFIKCRACLKRFIDLDKHIRCPKCTICDGLGDKAEQIPHDHKEKCRRPPGRPPKPKVIPIPISPVQEIESSDEEKPRKLKVLTSKPKEKKQSEKSNQPVEPGDLTLVAYDPEKDHAEYRLEIGTEPPTENTVQKCDAIPECNWLTDDQLTDRVTQLLNLLLDAELLSSFGWPNASVEHVLSAVIQQCDHKPADYDTCPNYGTKMRENAKLLITVVVDNDSTKNLLNNHTIDEVIMQIIDMTHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -