Basic Information

Insect: Microchrysa polita
Gene Symbol: -
Assembly: GCA_949715475.1
Location: OX454415.1:112726539-112733758[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00079 0.08 14.6 3.0 1 23 226 248 226 248 0.99

2 11 0.56 56 5.6 1.2 1 23 254 277 254 277 0.96

3 11 5.9e-05 0.0059 18.1 2.2 1 23 329 352 329 352 0.97

4 11 9.5e-05 0.0096 17.5 1.0 1 23 355 377 355 377 0.97

5 11 0.0011 0.11 14.2 1.7 1 23 383 406 383 406 0.95

6 11 9.2e-06 0.00093 20.7 3.1 1 23 439 462 439 462 0.98

7 11 2.6e-06 0.00026 22.4 3.5 1 23 467 489 467 489 0.99

8 11 0.0044 0.44 12.2 0.5 1 23 495 518 495 518 0.94

9 11 0.0012 0.12 14.0 2.2 2 23 537 559 536 559 0.94

10 11 0.00018 0.019 16.6 2.0 1 23 565 587 565 587 0.98

11 11 4.2e-06 0.00043 21.7 1.4 2 22 594 614 593 614 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00079	0.08	14.6	3.0	1	23	226	248	226	248	0.99
2	11	0.56	56	5.6	1.2	1	23	254	277	254	277	0.96
3	11	5.9e-05	0.0059	18.1	2.2	1	23	329	352	329	352	0.97
4	11	9.5e-05	0.0096	17.5	1.0	1	23	355	377	355	377	0.97
5	11	0.0011	0.11	14.2	1.7	1	23	383	406	383	406	0.95
6	11	9.2e-06	0.00093	20.7	3.1	1	23	439	462	439	462	0.98
7	11	2.6e-06	0.00026	22.4	3.5	1	23	467	489	467	489	0.99
8	11	0.0044	0.44	12.2	0.5	1	23	495	518	495	518	0.94
9	11	0.0012	0.12	14.0	2.2	2	23	537	559	536	559	0.94
10	11	0.00018	0.019	16.6	2.0	1	23	565	587	565	587	0.98
11	11	4.2e-06	0.00043	21.7	1.4	2	22	594	614	593	614	0.95

Sequence Information

Coding Sequence: ATGCAGGAGGCATACGAAGAAATTAATATTTACGATCTTGACATCGCTACTTTGGAGCCACATGATCCTTTCTCCAGACCTTTAGAGGAGGGTGCGCTGATCGACAAATGTCGTGCATGTATTCAACATCTTCTCGATATAAGGCACAATCTTTTGGAATCTACAGAATTGTTACAATTGTTCAGGCGGCTATCGACAACAGAGATCGATATCGATGACCTTCTTCCGAAATCCATATGCAATCAATGTTTTCTACGTCTTAAGAACTTCGAGAGTTTTCAACAGAAATGTATTTCATCCTACTCGGATTTGCTACTGTGCTCAGCGAAAACACTAAAAGAGGACCCCTTCGATTCGGATCCCTTTCCGACTGAGTCCATCATAAATTCGGATAATGATAACAATCAAACAAAAACCCAATTTAAGTTTGAAGAAGCAAATTTCTCCGAAAACGAAGATGAACCCGACATTCCGGATTGTTTCCAAGATGAAATTAAAATCGAAAATGAAGTTTTCGATTGCTCCCAAGACAAAACAATGGAAACATTGGAACAAATTGAAGATTCATTATTTTCTAATCATGAAATAGATCCGAGCACGAGCACAGATCATGGAACCAATGAGATAAATAGAATAGATTTTGACACAACAATTGGAGGCGATCAGACTGCTCTGTATAAGTGTGAAAAATGCGAAAGTTCGTTTGATAGCGAGTTTCATTATGAGGCGCATTTACGGAAGCACGAAGGCAAAAAGCCGTATCCATGTTCGTTATGTGCACGAGAATATCTTTATTTCAATACGTATCAAAAGCATATGAAAACTGAACATAGCGATCAAGCAATCGAGTCCAGTGTTGACACTGTGCCGAAAAAAGAACTAAAGCATCACAAACTGAAACGCCAAAAACGCTCGCATACAAGTATAAGACCACATGAGGAAGATGCGAACGTGCAGCTGAAGAAAGACAATCCCAAAAAGAAATATTCATGTGAGCACTGTGAACGGAAGTTTTCAGAGGAAGAGAATCTCATCAAACACACTAACCGTATGCATCTTGGTTACAAGTGTTCGTATTGCGATAAATCGTATAACAACGCTTTGACGCTCAAAGATCACGAAACAATACATACGGGCGAAATGGCTCACAAGTGTCCACATTGCGACAAGGCATACAGATGGAAACCTCAGCTGCGTCTACATCTAAAAGCTGCACATAAGACTAATGCAGACGGGAACGATTCTATGGACATGGAAAATGATAAGGCGGAGACTGAACAAAATTCCACTGAAAAACAGGACAaaccaagaaaatatcaatGCGGACAATGCGACAAGAAATTTTTTCAAAGAGCTCATCTTCAACGACATACTGAGACTGTACATTTGGGTTTGAACTATACGTGTTCGCATTGTAAAAAATCCTTTACTCAACTTCAATCACTCAACGCTCACTTAAAAATACATACGGGCGAAAGACCATACAAATGCTATTATTGCGATAAAGCATTTATTCTGTCAAGTCCACGACGTTTGCATATAAAAGCCATGCATAAGGATAAAGCACATCTTCTCAAAGATATGAAACCCAAACGAGACTACCCAAAAAGGTGTGACATCTGCGATAGGGACTTTACCAATCAttATAACTACCTGAGTCATGTTAAATTTGTACACGAAAAATTCCAACCATATACATGTCAATTCTGTAATAGAAAGTTTGGTAAACGAAATTTACTGCGTAATCACATTATGATACACACAGGCGAACGGCCGATTAAATGTGAACATTGCGATAAACGATTTATTTCGCGAAGTGCATTACGTTCTCATATGAAAAAGCGCGAACAGGATATTGCTCTCGGAAAAGTGCCGTGTAGTAAAAAGAAGCCAAAGGCGCATACGTTGCATCAGAAAGATATGTCGAAAGCAAATATTCCTGTTCCAGCGAACAGCTTGCAAGTAAATATTTCTCCAACAATCAGGCCTCCAGTAAATACTCTTCCAGCAATTGTGTCGCAAGCCAATATGCCACAAATCCAAATTCCGGCTCCAGCAAGCAGCCACCAATTAAATATTTCTCCAACAATTGGGCCTCATGTAATTATTCCAGAAAACGGCCTTCAGGTAAATATATCTCCAACTAGTGGGCCTCAGGCGAATTTTTCTTCAACAACTATGATTCAAGCAAATATGCCTCAAGGCGATATTCCACAACTGAATATTCCGATTCCCACAAACAGCCTTCAACTAAATATCCCTCAAGGAGATATTTCGCAAGCGAACGCGTCTCAGCCAGAAGGCAGATTAATAGTCGCTTACAATCCGGATAGAACAATTAAAAAGGCATGGTATATGAGAATGGTGTGA
Protein Sequence: MQEAYEEINIYDLDIATLEPHDPFSRPLEEGALIDKCRACIQHLLDIRHNLLESTELLQLFRRLSTTEIDIDDLLPKSICNQCFLRLKNFESFQQKCISSYSDLLLCSAKTLKEDPFDSDPFPTESIINSDNDNNQTKTQFKFEEANFSENEDEPDIPDCFQDEIKIENEVFDCSQDKTMETLEQIEDSLFSNHEIDPSTSTDHGTNEINRIDFDTTIGGDQTALYKCEKCESSFDSEFHYEAHLRKHEGKKPYPCSLCAREYLYFNTYQKHMKTEHSDQAIESSVDTVPKKELKHHKLKRQKRSHTSIRPHEEDANVQLKKDNPKKKYSCEHCERKFSEEENLIKHTNRMHLGYKCSYCDKSYNNALTLKDHETIHTGEMAHKCPHCDKAYRWKPQLRLHLKAAHKTNADGNDSMDMENDKAETEQNSTEKQDKPRKYQCGQCDKKFFQRAHLQRHTETVHLGLNYTCSHCKKSFTQLQSLNAHLKIHTGERPYKCYYCDKAFILSSPRRLHIKAMHKDKAHLLKDMKPKRDYPKRCDICDRDFTNHYNYLSHVKFVHEKFQPYTCQFCNRKFGKRNLLRNHIMIHTGERPIKCEHCDKRFISRSALRSHMKKREQDIALGKVPCSKKKPKAHTLHQKDMSKANIPVPANSLQVNISPTIRPPVNTLPAIVSQANMPQIQIPAPASSHQLNISPTIGPHVIIPENGLQVNISPTSGPQANFSSTTMIQANMPQGDIPQLNIPIPTNSLQLNIPQGDISQANASQPEGRLIVAYNPDRTIKKAWYMRMV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -