Basic Information

Insect: Microchrysa polita
Gene Symbol: -
Assembly: GCA_949715475.1
Location: OX454418.1:98574479-98580127[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00044 0.044 15.4 0.8 2 23 218 240 218 240 0.97

2 11 0.00051 0.051 15.2 1.7 1 23 248 270 248 270 0.96

3 11 7e-05 0.0071 17.9 3.0 1 23 276 298 276 298 0.96

4 11 2.3e-06 0.00023 22.6 0.1 1 23 303 325 303 325 0.97

5 11 0.00027 0.027 16.1 2.4 1 23 331 353 331 353 0.97

6 11 0.02 2 10.2 6.7 1 23 359 382 359 382 0.96

7 11 4.5e-05 0.0046 18.5 1.1 1 23 596 618 596 618 0.97

8 11 3.7e-05 0.0037 18.8 0.6 1 23 624 646 624 646 0.97

9 11 0.00095 0.096 14.3 0.1 1 23 651 673 651 673 0.98

10 11 1.3e-05 0.0013 20.2 1.2 1 23 679 701 679 701 0.99

11 11 0.003 0.3 12.8 3.7 1 23 707 730 707 730 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00044	0.044	15.4	0.8	2	23	218	240	218	240	0.97
2	11	0.00051	0.051	15.2	1.7	1	23	248	270	248	270	0.96
3	11	7e-05	0.0071	17.9	3.0	1	23	276	298	276	298	0.96
4	11	2.3e-06	0.00023	22.6	0.1	1	23	303	325	303	325	0.97
5	11	0.00027	0.027	16.1	2.4	1	23	331	353	331	353	0.97
6	11	0.02	2	10.2	6.7	1	23	359	382	359	382	0.96
7	11	4.5e-05	0.0046	18.5	1.1	1	23	596	618	596	618	0.97
8	11	3.7e-05	0.0037	18.8	0.6	1	23	624	646	624	646	0.97
9	11	0.00095	0.096	14.3	0.1	1	23	651	673	651	673	0.98
10	11	1.3e-05	0.0013	20.2	1.2	1	23	679	701	679	701	0.99
11	11	0.003	0.3	12.8	3.7	1	23	707	730	707	730	0.96

Sequence Information

Coding Sequence: ATGGAACAAAATTCCTCACTTCATGCCATATCATGGCGAAAATGGTGTCGCCTATGTGCCCGGGTTCCTAGTGccattgatattttctccaaacAAGAGGATGGTTCCAACTGCTTGGCCGAGTTATTATTGAAATATATACATTTAAAGACCGATCCATTGGACGGGTTACCCCTTTCAATTTGTTCATCATGCTATCAGTTCGTGCTGTCGGTAGCCAGGTTTGCAGATCGGGTAGCCCAAGTGGATGTCATGTACGCTTCGTTAGCTTGTAATGATGCGAGTTCCTTGGACTCGTCCTGTATAAAATTACAGTTTGGCTTGGTAAAAGAAGAACCCCCAATTTTGCATAACAAATGCGACAAGTCAACGGACACTTTGGATCTATGTTTCGAATGGGAGGAGCAAAAATTTGATCCATTGGAAGCACAAGAACAGAAAGAGGATATTGTAGCAGATGTCAGTATTAACAATTTGCCCGATATTGTAAATGATGACAGCGATAGCCCAAGCAGCCTTGCGTCGGATAAGAGTGCATACGAAAGCGAAGAATCGCCACATGGAACATTCGGCACGGACACCACCCTAAGGTCACCCGAGGAATCGAAAGTCTCGAAAAGGAATCAACGAAAAAGAAAAGTGCAATATAACACATGCGAGTTTTGTGACGAGTCCTTTCCGCTACGCAGAGCTCTTCGCCGTCATAAGAAAACTGCACATGCCGCTGAAATGCAAAAAGAGTTTATGTGTGAAATATGCGCCAAATCATTCATGACAAAGTTCGAACTCAAAAATCACAATTACACGCACACGAATGATACACCTTACAAATGTTCAACATGCAATAAGCATTTCTCCAATAAGCCACTACTGAAGCAACACGAAGACATCCACTCGGGAACTGCATACGTGTGTTCGGTTTGTGGTCTGGTTCTGAATACGAAAAGCAACCTCAACAGGCATATGGTGGTCCATTCCGATCaaaagaagtttaaatgtacggTTTGTAGCAGAGAGTTTAAACGTTTCAAGACGCTAAAGGCTCACACGATTCTTCACACTGGCTTGAAACCATATAACTGTCCGTTTTGCGACAAGACGTTTTCGACTGGTTCGCATTGTCGTAGtcataagaaaaaaattcatCCTGTGGAATTGGCTGCTATGGAAGCGGCTGGCATTGTGACCGAAAAAGTAAGGCTACCCGAATTGAAAGATATGAAGCCACAGGCAGGTTTGAAATGTCACAGTCGTAAGAAAAAGGCTAAAGCTGAGGAATTGGCTGCTGTGGAAGTGGAAGACATTGTGACGGAGAAAGTGAAGTTACCAGAATTGACTGAAAAGCAACCACAGGAAGCCAAGTTTGCTGATCAGGCATCCCGAGTGGATAGAATGTACGCATCTTTGGCCTGCAATGATATGAACTCTTCTGACTCGTCCTGTATTAAGTATCAGTTCGGTGTAGTGAAGGAAGAACCTGTTAATTGTTATAACAAATGCGACCAATCAACGgacacattggatctatacttCGAATGGGAGGAGGCAAAGTTCGACCCACTGGCAGTACCAGACGATAAGAAAGAGGAAATGGAATTAGATGTCAGTATTAACGATTTGTCCGATATTGTAAATGACGACAGCAATAATAGCATAAGCAGTTGTGATATTACGGATAATCTTCCAAGCGAGGGCGAAGAATCGCCGAAAAGAATGCCTCTCAAAACGTTTGCAGATGAACCTAAAATACAACATTTGCGAAGAATTCATCTGAACGATCGACCATTTGTGTGCGAAGTATGCGGCAAATCTTTCTTATCAAAGAGCGAACTCAAGAATCATAAGTACTCGCACGCGACTGATACGCCTTACAAATGTCCAACGTGCAATAAGCAGTTTACAAGTAGCGCAGGATTTAAGTTACATGTAGACATCCACTCTGAAACAACGTACAAGTGTCCGATTTGTAGTGTGGTTCTGAATACGAAAAGCATTCTACAGAAACATATGGTGGTGCATTCCGATGAGAGGAAGTACAAGTGTACTGTTTGTGGTCTGGAGTTTAAACGTATGAAGACGCTAAAGAGTCACTTGAATATTCACACTGGATTGAGAAAATACCCGTGTCCATTTTGTGACAAGGCATTTGTACACAGCTCGAATTGCAGTGAACATAAGAAAAAAGTTCATCCCATTGAGTGGGCCGAGATGGAAGCAACTGGTATTTTGTCCCAAAAAGAAAAGTTATAA
Protein Sequence: MEQNSSLHAISWRKWCRLCARVPSAIDIFSKQEDGSNCLAELLLKYIHLKTDPLDGLPLSICSSCYQFVLSVARFADRVAQVDVMYASLACNDASSLDSSCIKLQFGLVKEEPPILHNKCDKSTDTLDLCFEWEEQKFDPLEAQEQKEDIVADVSINNLPDIVNDDSDSPSSLASDKSAYESEESPHGTFGTDTTLRSPEESKVSKRNQRKRKVQYNTCEFCDESFPLRRALRRHKKTAHAAEMQKEFMCEICAKSFMTKFELKNHNYTHTNDTPYKCSTCNKHFSNKPLLKQHEDIHSGTAYVCSVCGLVLNTKSNLNRHMVVHSDQKKFKCTVCSREFKRFKTLKAHTILHTGLKPYNCPFCDKTFSTGSHCRSHKKKIHPVELAAMEAAGIVTEKVRLPELKDMKPQAGLKCHSRKKKAKAEELAAVEVEDIVTEKVKLPELTEKQPQEAKFADQASRVDRMYASLACNDMNSSDSSCIKYQFGVVKEEPVNCYNKCDQSTDTLDLYFEWEEAKFDPLAVPDDKKEEMELDVSINDLSDIVNDDSNNSISSCDITDNLPSEGEESPKRMPLKTFADEPKIQHLRRIHLNDRPFVCEVCGKSFLSKSELKNHKYSHATDTPYKCPTCNKQFTSSAGFKLHVDIHSETTYKCPICSVVLNTKSILQKHMVVHSDERKYKCTVCGLEFKRMKTLKSHLNIHTGLRKYPCPFCDKAFVHSSNCSEHKKKVHPIEWAEMEATGILSQKEKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -