Mpol033394.2
Basic Information
- Insect
- Microchrysa polita
- Gene Symbol
- ZNF131
- Assembly
- GCA_949715475.1
- Location
- OX454421.1:22187965-22202344[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.24 25 6.8 0.6 1 23 241 266 241 266 0.93 2 15 0.0042 0.42 12.3 3.9 1 23 301 323 301 323 0.98 3 15 0.00061 0.061 14.9 2.4 1 23 329 352 329 352 0.98 4 15 6.1e-06 0.00062 21.2 2.0 1 23 358 380 358 380 0.97 5 15 2.3e-06 0.00023 22.6 0.8 1 23 386 408 386 408 0.98 6 15 0.0012 0.12 14.1 1.7 1 23 414 436 414 436 0.96 7 15 2.7e-05 0.0027 19.2 1.2 1 23 442 464 442 464 0.94 8 15 0.0038 0.39 12.4 1.8 1 23 481 504 481 504 0.97 9 15 3.1 3.1e+02 3.3 1.7 1 23 509 530 509 530 0.83 10 15 0.00024 0.024 16.2 0.3 2 23 576 598 575 598 0.94 11 15 1.2 1.2e+02 4.6 5.9 2 23 605 627 604 627 0.92 12 15 0.00017 0.017 16.7 0.4 1 23 633 655 633 655 0.98 13 15 0.024 2.4 9.9 6.9 1 23 661 683 661 683 0.95 14 15 2e-06 0.0002 22.8 2.4 1 23 689 711 689 711 0.99 15 15 0.0012 0.12 14.0 3.3 1 23 717 740 717 740 0.98
Sequence Information
- Coding Sequence
- ATGGACGAAGATATTGTGGAAGAATTATTCGATGCGGAAATCATCGAGACCGACTTGAATGAGCTGTGTCGAATTTGTGGTAGCACGTCTGACAGTCCGCTCGTACCGATCTATGAAGAAAATGGGCTGGTCGAGGAGTTGGCTTCCAAAATTATGCTCTATTTACCGATAAAGATCTCTGAAGATGATGAGTTGCCCATTAATGTTTGCGTCAATTGTGCCAATGGTGTGCTCACTTGGCATTTACTTTTCGAATGTTGTGTGGATGCCAATAAACGCTTTCAAGCAATGCTCAATGAAATGGAGGAATCGCGACAACAGTCACCCGACAAAAATACGAATATCACCAACAAAACACTCGATCAGACAATGAAAGAACAAGAGCAGAATACAACGGTTCGCGCGGAGGAGCCCGAAATGGAAGATGTTATGTTTCTGCGAGCAGAATATGGTCCGGAAGACGAACAATATCTGGAAGATGAAACGCATTTAGCCGATGAAGAATTGGAATTGAAAAATGGAGATCAATTGCCATTGAAACATGCTCCTTCATTTGACAATTTACTTGAAACATCTCCGTCACAATCGCCCATCACATCTGACTTTATGAAACTTGACATAGAATCTCACCCGTCTCTGGTGGCTGACATAGAAGATTCTCATGTGTTCAAATACCGAACTGATTACAGCGAAACGCCAGAAACAATTGATGGTAAACCTTTTACATGTCCGGTCGACGGTTGCAATACCGCCTACAACGCTAAACGTGAATTTTGTGAACATTTAATTGACAGGCATAAAGACAACATTGAAAAACTAGTTAAACTAGGACATAGGCCCTTGCATGTAGACCTAAAAAGTTTTCGCCATATGAAAGTTATAATTGATGGTCGTCGCCTGTTCAAATGTCCGCAATGTGAAAAATTGCTCTCGTCATCGTATTGTTTTAAGaatcatttgaaaattcacaCTAACGACAGACCGTACACTTGTTTCTTCTGCAACAAGTCGTTTCGTATCTACTCGGGCATTACACGACACATACAAACAACacatttacaaatgaaaagataCTCCTGTGATATTTGCGATATGAAATTTACGAGTAAGAGTAATCTGGGTCAGCACATGCATTTGCATGGTGACGCAAGGCCATATGTTTGTTCGATTTGTGACAAAGGATTTAAGCAAAAATCGGCCCTGTTTTTGCACTCACAAACACATTCCGACTCATTTCCGTACAAGTGTGACTATTGTGGCAAGGGATTTCGCTTTAAGACGCCCATGCTGTATCATAGAACTGTTCATACGGGCGAAAAACCATTCGAATGTTCGGTGTGTGGGAAAAAGTTTCGAATGAAGAATGACTTAACAAAACATTCAGAATTGCACAATGCTGATGAACCGTATAAGAATCGAATATTCAAAAGCCGTCAGCAACATCAGTGTATGTTTTGTAAGGAGGTCTACACGGCAAAGGACTCATTAAACGAGCACTTGAGAAATAATCACTACAATCAGATTTTCCATTGTGATGTATGCAATGAGTACAAGGATCAAAATGATCTAATATCACATATGACCCAGCACGCCTTAAAttcactacaacaacaacaggcaGAGCCCCACCAACCAGAAAGTCGCCCGGAAGTGTCGACCCCTCCGAATCAACAAGCCAAAGCGATAAAACCAAAGACTAAAACAGCATCAACTACAGCTAAAttgaaatgtaaaaaatgtGATAAAATCTTCACTAGTATAAGTGGCGTACAGTATCACATGAATGCCGTGCATGATAAATTGAAAACATGCAAATGTACGCAATGCGACAAGATGTTCTCGTGTAAACGTATCTTGGATAATCACATTCGTAGTATGCATGTCAAGAAGAAAGACTATCAATGTGATTTATGCGAGAAGGCATTCAAAACCGATGCGGCACTCTATTCACATAAGAAAGTCCACGACAACGCCTTTCCGTTTGAGTGTGAAAAGTGCGGCAAAACGTTTCGATTCAAACACCATCACGTATCACACTTGGAAATTCACAATTTAGAAAAGAAATATTCATGTAATATTTGCAGTAAGCAGTTCTATTCCAAGGCCAATTTGAGTAAGCATTTGAAAACGCACGAGTCGGCGCTTGAATATACGTGTCATATATGTAACGTGAAATTGAAGCAACGGCGTTATCTGTACGAGCATATGAAACGTGCCCATAAGCCCATTCTGAACAAGCCGACCAACAATTGA
- Protein Sequence
- MDEDIVEELFDAEIIETDLNELCRICGSTSDSPLVPIYEENGLVEELASKIMLYLPIKISEDDELPINVCVNCANGVLTWHLLFECCVDANKRFQAMLNEMEESRQQSPDKNTNITNKTLDQTMKEQEQNTTVRAEEPEMEDVMFLRAEYGPEDEQYLEDETHLADEELELKNGDQLPLKHAPSFDNLLETSPSQSPITSDFMKLDIESHPSLVADIEDSHVFKYRTDYSETPETIDGKPFTCPVDGCNTAYNAKREFCEHLIDRHKDNIEKLVKLGHRPLHVDLKSFRHMKVIIDGRRLFKCPQCEKLLSSSYCFKNHLKIHTNDRPYTCFFCNKSFRIYSGITRHIQTTHLQMKRYSCDICDMKFTSKSNLGQHMHLHGDARPYVCSICDKGFKQKSALFLHSQTHSDSFPYKCDYCGKGFRFKTPMLYHRTVHTGEKPFECSVCGKKFRMKNDLTKHSELHNADEPYKNRIFKSRQQHQCMFCKEVYTAKDSLNEHLRNNHYNQIFHCDVCNEYKDQNDLISHMTQHALNSLQQQQAEPHQPESRPEVSTPPNQQAKAIKPKTKTASTTAKLKCKKCDKIFTSISGVQYHMNAVHDKLKTCKCTQCDKMFSCKRILDNHIRSMHVKKKDYQCDLCEKAFKTDAALYSHKKVHDNAFPFECEKCGKTFRFKHHHVSHLEIHNLEKKYSCNICSKQFYSKANLSKHLKTHESALEYTCHICNVKLKQRRYLYEHMKRAHKPILNKPTNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -