Basic Information

Insect: Microchrysa polita
Gene Symbol: -
Assembly: GCA_949715475.1
Location: OX454417.1:96625614-96629704[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 6.3e-05 0.0063 18.0 1.3 1 23 187 209 187 209 0.99

2 9 0.00016 0.016 16.7 4.5 1 23 210 233 210 233 0.92

3 9 3.5e-05 0.0036 18.8 4.0 2 23 239 261 238 261 0.95

4 9 8.9e-08 9e-06 27.0 1.8 1 23 267 289 267 289 0.97

5 9 6.3e-05 0.0063 18.0 1.3 1 23 479 501 479 501 0.99

6 9 7.7e-06 0.00078 20.9 3.0 2 23 503 525 502 525 0.96

7 9 4e-05 0.0041 18.7 2.9 2 23 531 553 530 553 0.95

8 9 1e-07 1e-05 26.8 2.3 1 23 559 581 559 581 0.97

9 9 0.00017 0.017 16.7 1.1 2 23 588 609 587 609 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	6.3e-05	0.0063	18.0	1.3	1	23	187	209	187	209	0.99
2	9	0.00016	0.016	16.7	4.5	1	23	210	233	210	233	0.92
3	9	3.5e-05	0.0036	18.8	4.0	2	23	239	261	238	261	0.95
4	9	8.9e-08	9e-06	27.0	1.8	1	23	267	289	267	289	0.97
5	9	6.3e-05	0.0063	18.0	1.3	1	23	479	501	479	501	0.99
6	9	7.7e-06	0.00078	20.9	3.0	2	23	503	525	502	525	0.96
7	9	4e-05	0.0041	18.7	2.9	2	23	531	553	530	553	0.95
8	9	1e-07	1e-05	26.8	2.3	1	23	559	581	559	581	0.97
9	9	0.00017	0.017	16.7	1.1	2	23	588	609	587	609	0.97

Sequence Information

Coding Sequence: ATGCAATGCGAAACTACGGATAAATCGTTACGTGAAAAACTTGCTTGCAAAATCCCACCAGAGGAAGGTGCAAATTCTGAACGAATTGAATCAAATCATACAATGACCTCTTCAATATTGGAATCACCGAGTAACGTTGTTAAAGAagaaagagaagaagaagaagaagcgatGGACGAATCTTACATCAAACTCATACCTGAAATTGTAGTCAAAACCGAAAAGTTCGAAACATCTGACTTATACGAAACAGCGCTACAAGTGGTGATAAATGGAATGCGTTTGGGTGAAGTTTTCGAATATTCCACTGATGAAGACGAGCCTCGTCCATCTGATGAAATTTCCGAATATTCCAATGATAAATACGAGCCTGGCCCATCTCGTGAAAAATCCGAATGTTCTAGTGATGAATATGAGCCTGATATTGCATCTGGTGAAACTTCGGAATATTCCAGTGATGAATACGAGCCTGGTCCATCTCGTGTTGTGTTAGAGAAACCTAAAAAAGTAGTAGCCAAAACAAATGAAACAAAAGCACGCGAAAAAGTCATAAAGACATACACCTGTCCCGTATGCACGGCTCCATTTACGAACTATCAAGAGTTTAACAAGCACAAGAAAACACATTGTAAATGTCCACATTGTGAtatgaaattttccaaaatggcaCATCTACGGCGACACATTGAAGGCGTCCATTCTAGTGATACTGTGCCGTGTGAAATATGCCAAAAATCATTCTCAAGTAGGCACACTTTAAGCAAGCATTTAAGGGAATGTCACTACAAGACGATAGCGCATCCATGTGAGATTTGTGGCAGGGTATTTTCGCGTAGATCAAACATGAGAAATCATATGACTACGCACGACACGGAACGTATTCAACGATGCGACCAATGTCCTGCGACGTGTGAAAATCGTTTAGGAGTGGCTTACGAATTCAAAGTGCAATGCGAAACTACGGACAAATCGTTACGTGCAAAACTTGCTCGCAGAATTCTACCAGAGGAGGGGTTAAAATCTGAAAGAATTGAAATGAACGGTAACGTGACCGATTCAATATTGGAATCACCGAGTAACATTGTTAAAGAagaaagagaagaagaagaagcgatGGACGAATCTTACATCGAACTCATACCTGAAACTGTAGTGAAAAGCGAAAAGTTCGAAACGGCCGAAACAGCGCTACCGGTGATAAATGGAATGCGTTTAGGTGAAGTTTTCGAATATTTCAATGACGAAGACGATCCTTGTCCATCTCATGAAACTTCCGAATATTCCAATGTTAAATACGAGCCTGGTCCATCTCGTGAAATTTCCGAATATTCCACAGATGAATACGAGCCGGGTCCATCTGGTGTTTCGTTAGAGAAATCTAAAAAAGTAGTAGCGAAAGCGAAAAGAAAACCATATGAAAAAGTCATAAAGACATACACCTGTCCCGTATGCACAGCTCCATTTACGAACTATCAAGAGTTCAACAAGCACAAGAAAACACATGGTAAATGTCCACATTGTGATACAAAATTTTCCAGTATGTATCATCTACGGCGACACATTGAAAGCGTCCATTCTACCGACACTGTGCCGTGTGAAATATGCCAAAAATCATTCGCAAGTAGTCACACTCTAAGCAAGCATTTGAGGGAATGTCACTACAAAACGGTAACGCATTCATGTGAGATTTGTGGCAGGGTATTTTCGCGTAAATCAAACATGAAAAAACATTTGATTACGCACGACACAGAACGTACTCAACGATGCGATCAATGTCCTGCGACGTTCAAAACAAAGGAGGGTTTGATCACTCATAAGAAAAAGCATATAACGAAAGGAGAGCCCAATGCTACCAGCAAATAG
Protein Sequence: MQCETTDKSLREKLACKIPPEEGANSERIESNHTMTSSILESPSNVVKEEREEEEEAMDESYIKLIPEIVVKTEKFETSDLYETALQVVINGMRLGEVFEYSTDEDEPRPSDEISEYSNDKYEPGPSREKSECSSDEYEPDIASGETSEYSSDEYEPGPSRVVLEKPKKVVAKTNETKAREKVIKTYTCPVCTAPFTNYQEFNKHKKTHCKCPHCDMKFSKMAHLRRHIEGVHSSDTVPCEICQKSFSSRHTLSKHLRECHYKTIAHPCEICGRVFSRRSNMRNHMTTHDTERIQRCDQCPATCENRLGVAYEFKVQCETTDKSLRAKLARRILPEEGLKSERIEMNGNVTDSILESPSNIVKEEREEEEAMDESYIELIPETVVKSEKFETAETALPVINGMRLGEVFEYFNDEDDPCPSHETSEYSNVKYEPGPSREISEYSTDEYEPGPSGVSLEKSKKVVAKAKRKPYEKVIKTYTCPVCTAPFTNYQEFNKHKKTHGKCPHCDTKFSSMYHLRRHIESVHSTDTVPCEICQKSFASSHTLSKHLRECHYKTVTHSCEICGRVFSRKSNMKKHLITHDTERTQRCDQCPATFKTKEGLITHKKKHITKGEPNATSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -