Basic Information

Insect: Microchrysa polita
Gene Symbol: -
Assembly: GCA_949715475.1
Location: OX454417.1:96778384-96779999[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0037 0.37 12.5 0.2 1 23 164 186 164 186 0.99

2 10 6.6e-06 0.00067 21.1 0.2 1 23 191 214 191 214 0.96

3 10 0.0021 0.21 13.3 1.6 2 23 220 242 219 242 0.96

4 10 1.3e-06 0.00013 23.3 2.0 1 23 249 271 249 271 0.97

5 10 0.096 9.7 8.0 2.0 1 23 277 300 277 300 0.96

6 10 8.3e-05 0.0084 17.7 1.6 1 23 321 343 321 343 0.98

7 10 1.2e-06 0.00012 23.4 1.1 1 23 349 371 349 371 0.98

8 10 1.5e-05 0.0015 20.0 2.0 1 23 377 400 377 400 0.98

9 10 2e-05 0.002 19.6 1.7 1 23 406 428 406 428 0.98

10 10 1.5e-05 0.0015 20.0 0.8 1 23 434 457 434 457 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0037	0.37	12.5	0.2	1	23	164	186	164	186	0.99
2	10	6.6e-06	0.00067	21.1	0.2	1	23	191	214	191	214	0.96
3	10	0.0021	0.21	13.3	1.6	2	23	220	242	219	242	0.96
4	10	1.3e-06	0.00013	23.3	2.0	1	23	249	271	249	271	0.97
5	10	0.096	9.7	8.0	2.0	1	23	277	300	277	300	0.96
6	10	8.3e-05	0.0084	17.7	1.6	1	23	321	343	321	343	0.98
7	10	1.2e-06	0.00012	23.4	1.1	1	23	349	371	349	371	0.98
8	10	1.5e-05	0.0015	20.0	2.0	1	23	377	400	377	400	0.98
9	10	2e-05	0.002	19.6	1.7	1	23	406	428	406	428	0.98
10	10	1.5e-05	0.0015	20.0	0.8	1	23	434	457	434	457	0.98

Sequence Information

Coding Sequence: ATGGCCTACGAATTCAAAGCACAATGCGAGCAAACAGATAAATCACTTCGTCAAAAACTTGCACTACTCATTGATGTTCCGTACGAAATGGTTGCATTCGAGCCAATCAGACCAGAGCCAATCGATTCCAATTTAACTCTAGAGAGTAGCGTTgttaaagaagaagaacaaataAGCCAAGTTGACGTTCCAGCTATCTTACCAGACACTGATTCTACTACTGATCCTGTACAGCCGTTAATTGTTGAAGAAGATCCACTGGAACGGTTTGAAAATTCTATTGATGCAACGTTAACTGAGTCAAACGATTCTATCCGGCAAACTGAACAACCTTCTACGAGCATTCGATTGAAACGAAAATATCAGCGACGCaagaaaattgtaaaaacctTACCTGAGTCAAACGATTCTGTCCGGCAAATTGAACAACCTTCTACGAGTATTCGAGTGAAACGAAAATATCAGAAACGCgagaaaattgtaaaaatcttcaaatgtcccGCGTGTCCGGCCTCGTTTACCGTTTTTCCTGATTTCCTTGCACACAAGAAAACACACGGTAAAAATCTGTATGTGTGCCCCACATGTAATAAGGGCTTTCCTCGGAACAGTGGTCTAAAACTGCACACTGAATCGATTCATCCCAGTAGCAAGGTAACCTGTAATTTGTGCAATAAGGAGCTGGCGAGCACATACACCCTTCGCAATCATATAAGGGAATGCCacgaaaaaaagaaaacgcCACATCCCTGCAAGATTTGTGGCAAAAAGTTTTATCGCAAAGCCAACATGAGATCGCATATGGATGTGCACAACACAGAGCCGATCTATGCGTGCGATCAATGTCCTTCGAAGTTCAAGGCAAAACAGGGGCTTTTTGTGCACCGGCATCGAACACACAAACCCAAAAAAGATGTAATTCGTAGAACGAAAACTACGACCCAACAACGGAAACGTCCTTATGTATGTGAGCATTGTGGTAAAGTATGTGCAAGCTTATCTGCTTATCTTAATCACAATCGAATCCACTCGGGTGAAAAGCCCTATGTGTGCACGGTGTGCAAGAAATCGTTCAGACAACAATCGGCAATGGTTACGCATAGGCGTGTTCACACGGACGAAAGGCCATATTCCTGTAATTTATGCGAAATGAAGTTTCGACAAAGCACCCATTTAAGCGCACATGTAAGAACAATTCACGAACAGGCCCGACCGTATAAATGCAAATACTGTGAGAAGACATTTTCATGGGCCCAAAATCTAAGGACGCATGTTCGACTACATACGGGAGAAAAACCTTACGAATGTAAGCAATGTCCGATGCGTTTTGTGGATTTGAACGGTTTGAAGAGACATCGACGCAAGGAGCATTCGAATGAATCCGGTAGTAAGGAAGTCGCTGGCGATTCGAATAAAGATGTTGATCAAGTCAGTTCTGACAAACTCAACGATGAGGAGTGTATTGCGTCGACAAATGACAAGGAAGAGCTGGAGTCCAGCTTGGCTGCTCTACTGGAGGAGGATATTGATGATTCGTGTGCTCAGTGA
Protein Sequence: MAYEFKAQCEQTDKSLRQKLALLIDVPYEMVAFEPIRPEPIDSNLTLESSVVKEEEQISQVDVPAILPDTDSTTDPVQPLIVEEDPLERFENSIDATLTESNDSIRQTEQPSTSIRLKRKYQRRKKIVKTLPESNDSVRQIEQPSTSIRVKRKYQKREKIVKIFKCPACPASFTVFPDFLAHKKTHGKNLYVCPTCNKGFPRNSGLKLHTESIHPSSKVTCNLCNKELASTYTLRNHIRECHEKKKTPHPCKICGKKFYRKANMRSHMDVHNTEPIYACDQCPSKFKAKQGLFVHRHRTHKPKKDVIRRTKTTTQQRKRPYVCEHCGKVCASLSAYLNHNRIHSGEKPYVCTVCKKSFRQQSAMVTHRRVHTDERPYSCNLCEMKFRQSTHLSAHVRTIHEQARPYKCKYCEKTFSWAQNLRTHVRLHTGEKPYECKQCPMRFVDLNGLKRHRRKEHSNESGSKEVAGDSNKDVDQVSSDKLNDEECIASTNDKEELESSLAALLEEDIDDSCAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00999902;
90% Identity: -
80% Identity: -