Mpol015977.1
Basic Information
- Insect
- Microchrysa polita
- Gene Symbol
- hang
- Assembly
- GCA_949715475.1
- Location
- OX454417.1:36609737-36641962[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0099 1 11.1 1.3 2 23 229 251 228 251 0.95 2 20 0.12 12 7.7 1.0 2 22 337 357 336 357 0.93 3 20 0.0095 0.96 11.2 1.3 1 23 425 448 425 448 0.91 4 20 1.6 1.6e+02 4.2 1.4 2 23 488 510 487 510 0.89 5 20 0.00032 0.032 15.8 1.5 1 23 546 569 546 569 0.93 6 20 0.00058 0.058 15.0 0.1 1 23 577 600 577 600 0.94 7 20 5.4 5.5e+02 2.5 3.2 1 23 638 660 638 660 0.97 8 20 0.00034 0.034 15.7 0.3 1 23 707 729 707 729 0.98 9 20 0.0015 0.15 13.7 2.6 2 23 763 785 762 785 0.94 10 20 0.015 1.5 10.6 2.7 2 23 794 816 793 816 0.96 11 20 0.00031 0.031 15.9 0.4 1 23 829 852 829 852 0.97 12 20 0.00081 0.082 14.5 1.0 1 23 879 901 879 901 0.99 13 20 0.0075 0.75 11.5 2.1 1 23 909 932 909 932 0.96 14 20 0.043 4.3 9.1 1.9 2 23 940 961 939 961 0.96 15 20 0.00023 0.023 16.3 0.9 3 23 1016 1036 1014 1036 0.97 16 20 0.00065 0.066 14.8 1.1 1 23 1071 1093 1071 1093 0.98 17 20 1.6e-05 0.0016 19.9 0.1 2 23 1119 1141 1119 1141 0.90 18 20 0.027 2.7 9.8 0.7 2 23 1161 1182 1160 1182 0.96 19 20 5.2e-05 0.0053 18.3 0.1 2 23 1194 1215 1193 1215 0.97 20 20 0.0013 0.13 13.9 1.3 1 23 1345 1367 1345 1367 0.97
Sequence Information
- Coding Sequence
- ATGACGGACGACGTAATAGCACGGGCCGGGCCAAATTGTTGTCGCCTCTGCCTGGCCCCGGACAATGAATGTGTTCCGATTCTAACAAGTTTGGCGGCTGATAAGGAACCTCTTTCAGCGAAGATTCAAGCGTGCGTCAACGTGAAGATCAATCAATCCGACAATTTGTCACATCGAATATGTCATTCATGCATAAGCTTCTTGAACTCATGGCAAAGTTTCAAGAATCGATGTTTAGCCGCACAAGTGCGACAGACGAACTGGCTGGAAAAGGCCAAGAATGCAATGCGCCGTAAAATGGCACAAGTACAACGGCCGATGACTAGAAATGCAAGTGGAGAAGTACAGGGTCAAAGCAAGACTGCAACAGGACGTCCTATGCCGCTGCCCATTGTTATCAAAGAGGAGCCTGTTGACGAAGAAGCCGATGCTCGAGAACAGGCAGCGATGAAAGTGAATTTAGATCCGGGACAGTTTTTGGATAGCAGCTCCATAATAACTAAACAAGAGGAGGAGGAGGACGATTATGCAGATCGTAGTGACGAGGGACCGCAAATATTACGATCGTTGGGTCTAACGCATATTAAGAAATTGAATCCATTTAATAAATTGAACAAAAGCAATGATACAGACAAGAAATCGACGGAAAGCGGCAACAAATCATCACCCGAGATACCGCCAACACAATGCCGCTTCTGCAACATTAAATTTTCCTCGGCGACAAATGCTAGACGACATGAACGCAATATTCATCGATCGGGCGATTCGAATCCCGAAACTCCGAAAATGTGCATTAAACCGACTACAGCTCGTTCACTACTGAAACCTCAACAGACTCTGCGCCCGCAATCAACACCGATTATTTCGCCCACCAAATCAGCACCAACCCCTGAGATGATGGGCTTTTTCGATTACGACAAACCCGAAAAATATCGGCATTTCTTAACGGATTCCAAGTTGGCGTTTATTCgaaaaaatgaagaatttcTCCAACAATACCAGACTATGACATGTACCTGTTGTCCACAAACATTCCCGTCCTATAAAGCATTCATGGCACATATGCGACGAAAATATGCCAATCTGGGAAGAAATCTTTGCTTTAGGTGCCTGAAACAATTCCAGACCAAGGCACCATTTGTTTCGCATTTGAAGAAAAAGGATTGTATCAATTTGTATAAATTGTATAAGACGGATAAGGAAATGCCCAATTCGGCGACAATGACGTCTCCGGATAAACAGGGCACAAAAGAAAtgttaaataataaattgtatgAATGTAAATTATGCTCCAAAACATTCCGTTTGAAATTGGACTTTCGAAGTCATGTTTACGAGGCGCACGGTGACAGTATAAAGAAGGATGCATCACCGGGTCGCTGTGGATTTTGCAATGCAGGTTTAGATGATCCATCATTGCGACGACGACATTACAATAACATGGAATGTATTGTAGAGATTCGCTGCGGTACATGTAATGAGAAATTTGAGTTGCATCAACAATTCACGGATCACGTTTATGAAACGCACTTGCGAAACAACACAAACAATAATGATTCTGCCGGGGATATTGACACAGGGCCCACAGGCAGTGCTAACATTTCCCATGGCGAGAACGTCCATTCGCGGCTGCCTCATAGCTGTAATATTTGCGGACAGACGTACAATAATTACTACAATGTCCTGCGTCACATGGAAGGCAAACATCCCGATCAAGTTCCAAAGCGCTATATGTGTGACAAGTGCGATGCAGGTTTCTCCCGACAGGGCCCATTACGAGATCATATGTACGAGGTGCACGGAACAACACTGCCACGAGTCCGACGTGAAATGTTTTCATGCCGAATGTGCTCCGAACAAATCGATACAAGAGAAAGGTGGATTCAGCATCAGACTGAGCAACATTCACGCTACACTTGCTGCTTCTGTGCTTTCCAGACGAAAAATTTGGATCTTTTTAAGGAGCACATTGAAAATCACCCCCAACTGTCGATGAAAAATCTTCCAATCCTAGCGCCTAATATTCTGTCATTAACAAACGGCGGAAATGAGGGAGATGACGAGGCCGATGAAGATGCCGCTCCGCCTGCAaagaaaatcaaaattgaaCCGGCTGATTTTGAATGTGACGTATGCCACGTTTCTTTTTCGGGTAACGTTGCCCTTGCCAATCACAAGCGTGTCCATTATCAAAATGACGACTCGAAAAGTGTAAAAAACGAGACGTCGACCGCAAACGCGTCTCCAGCGCCTGAACTAATTCCCGGCGATCAAAATCGTCGAATAAGATGTCATTTGTGTTCGAAACGATATACATCGAAAATCACCTACCGAAAACACATGCTGGCTGAACACAAAATTCGCAACGTGAGCTTTATCAAGTGTAGCATTTGCAAGGCGGAGTTCACTCATGAACGCGGACTGAGAGTGCATTTGCACAAATCGCATGACAGTATGTTGGTCAACGAGACGTTTCATGCAATTTACGAATGTGAAGTATGTGATGCAGAGTTTAAGAGCGAAAAATCGCTGAATCAACACAGAAGCATGACTCATAAGAAACCAGAAGTTTCAATATCACTAGTGCCCGCCGTGGCAGTGGAACGAAGTGGAGAGGCGGAGCCAGTTTATTGGTATCAGTGCAGCTATTGCCCCGGTCACTTTGATACAAGTAAAAAGCTTGCTATTCATTTAAATGTTCACACAGAACACGATTCGACGGACTATTCATGCAAAGACTGCGGCAATGTGTACAATGGGCGCAAGAGTCTGTGGGTACATCGTCATAAAAAGCATCGCGAGATTCCAGATCCGTCGCCATGTCCGATTTgtaaaaaacttttcttttccAAGAAAATGCTAGACATGCACGTTAAACATCATAGTAGTGACGATCAGGATGATGATGCAGCGCCTGGAATGGACTATGATGCAGGAGAGACTGAACATGATAACAACGAGACATATGAACAGCTTGACCAGCCCGACGCCAATTTCACTGCTAATGCTGGTGTAGACCAACCATTGGTGGATGTGAAAGTTCATTGTACAGTGTGTAATGAAGAATTTAGCGATCAGGATCTATTCGACAAGCATATGGAGACTCATCAAATTGATTTGTACAGCGACAATCCGCTGGCAGCAATGTTTGATACCGGACCGGAGGATCCCaatcaaatttttatgaatCAGATGAGTGAAAGTGGAGCGTACACTTGCGATATATGTTCGAAACACTTCTCCGCGCTGACAGCACTGAAAGTACATCGGAATTGGCATTTTCGACAGGACGGTAAACAGGGTGCTGCTGACGGGAGCTCAAAAAACTCGGCCCAGAAAAAGAAATCGCACAATGTCTGTGAGTTCTGTGACACTGCCTTCTCTAGTCCCAGCAATCTCAAGCGTCATATTGTCGAGGTTCACAATCGAAACTCTCAGACCCCATCTGCTCGTGCCAAGCAGCTTATTGATAAAAATCTTGAATGTACCAAGtgcaatttgaaatttgaagaaaaaacaGAATGGGTTAAACATAAGATAACTCACGCGGGCGAATGTTCCGTTTCGACATTTGAATGGGTTTGCGAAATTTGTGGTAAAGTTGTGTCGCGAAAGGATCGGCTAATACAGCACCTGAACAGTCACATGAAATCAAATGCTGACGTCGAGGAAGAAGGCAATTCGCGTGATACGTTTGGATCGAATAAAACCGGTCGACGAAGTACAATGAAGAGATTAAGAACGGGCGATGATGACGACGTtgatgcttctgctgctgcgcATGGTAGTGGACAAATAACAAAGCCAAAGGATCATCACGAGGACGATGAAAGCAATGCGGGAGAAGAAAAAGTCGAAGAAAGTGACGAGGAAGGTGGTGCCCAGTCCAAAACGGCCTCCGAAAATCGAATACATTATGATGAAGATTCCAGTCAGCAATATCAAGAAGTCGACCCGGACGATATGGAAGAGGAAGAGGACGAAGAGAACGAGCCAGATGATGGCGTGGAGGAGGACGATAACATGGGCAGTTATTCGTGTGACCTATGTCAAGTGTACTTTGAAACATCGAAACAGTTGCGACGACATGTTACTAGTCACTTCCTCAATGGGCCGGGATCGGTAACGCTAACAGAAATTCCCAAAGAGAAATCGTATTCTTCGCAGTTGCGCGTAGGTGAAGATGTGGTCTCAATAACGCCTGTGTAA
- Protein Sequence
- MTDDVIARAGPNCCRLCLAPDNECVPILTSLAADKEPLSAKIQACVNVKINQSDNLSHRICHSCISFLNSWQSFKNRCLAAQVRQTNWLEKAKNAMRRKMAQVQRPMTRNASGEVQGQSKTATGRPMPLPIVIKEEPVDEEADAREQAAMKVNLDPGQFLDSSSIITKQEEEEDDYADRSDEGPQILRSLGLTHIKKLNPFNKLNKSNDTDKKSTESGNKSSPEIPPTQCRFCNIKFSSATNARRHERNIHRSGDSNPETPKMCIKPTTARSLLKPQQTLRPQSTPIISPTKSAPTPEMMGFFDYDKPEKYRHFLTDSKLAFIRKNEEFLQQYQTMTCTCCPQTFPSYKAFMAHMRRKYANLGRNLCFRCLKQFQTKAPFVSHLKKKDCINLYKLYKTDKEMPNSATMTSPDKQGTKEMLNNKLYECKLCSKTFRLKLDFRSHVYEAHGDSIKKDASPGRCGFCNAGLDDPSLRRRHYNNMECIVEIRCGTCNEKFELHQQFTDHVYETHLRNNTNNNDSAGDIDTGPTGSANISHGENVHSRLPHSCNICGQTYNNYYNVLRHMEGKHPDQVPKRYMCDKCDAGFSRQGPLRDHMYEVHGTTLPRVRREMFSCRMCSEQIDTRERWIQHQTEQHSRYTCCFCAFQTKNLDLFKEHIENHPQLSMKNLPILAPNILSLTNGGNEGDDEADEDAAPPAKKIKIEPADFECDVCHVSFSGNVALANHKRVHYQNDDSKSVKNETSTANASPAPELIPGDQNRRIRCHLCSKRYTSKITYRKHMLAEHKIRNVSFIKCSICKAEFTHERGLRVHLHKSHDSMLVNETFHAIYECEVCDAEFKSEKSLNQHRSMTHKKPEVSISLVPAVAVERSGEAEPVYWYQCSYCPGHFDTSKKLAIHLNVHTEHDSTDYSCKDCGNVYNGRKSLWVHRHKKHREIPDPSPCPICKKLFFSKKMLDMHVKHHSSDDQDDDAAPGMDYDAGETEHDNNETYEQLDQPDANFTANAGVDQPLVDVKVHCTVCNEEFSDQDLFDKHMETHQIDLYSDNPLAAMFDTGPEDPNQIFMNQMSESGAYTCDICSKHFSALTALKVHRNWHFRQDGKQGAADGSSKNSAQKKKSHNVCEFCDTAFSSPSNLKRHIVEVHNRNSQTPSARAKQLIDKNLECTKCNLKFEEKTEWVKHKITHAGECSVSTFEWVCEICGKVVSRKDRLIQHLNSHMKSNADVEEEGNSRDTFGSNKTGRRSTMKRLRTGDDDDVDASAAAHGSGQITKPKDHHEDDESNAGEEKVEESDEEGGAQSKTASENRIHYDEDSSQQYQEVDPDDMEEEEDEENEPDDGVEEDDNMGSYSCDLCQVYFETSKQLRRHVTSHFLNGPGSVTLTEIPKEKSYSSQLRVGEDVVSITPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -