Basic Information

Insect: Microchrysa polita
Gene Symbol: -
Assembly: GCA_949715475.1
Location: OX454418.1:8411447-8414101[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.3e-05 0.0013 20.2 2.1 1 23 134 157 134 157 0.96

2 13 0.00017 0.017 16.7 0.3 2 23 163 185 163 185 0.92

3 13 0.67 68 5.4 0.0 2 19 196 213 195 213 0.91

4 13 9.7e-06 0.00098 20.6 4.4 2 23 315 336 315 336 0.97

5 13 0.00012 0.012 17.1 5.6 1 23 342 364 342 364 0.93

6 13 0.0018 0.18 13.4 0.4 1 20 370 389 370 391 0.94

7 13 5.5e-05 0.0056 18.2 1.1 3 23 407 427 406 427 0.98

8 13 6.5e-05 0.0065 18.0 3.4 2 23 433 454 432 454 0.93

9 13 1.8e-06 0.00018 22.9 0.4 1 23 462 484 462 484 0.96

10 13 2.3e-06 0.00024 22.5 0.6 1 23 490 512 490 512 0.98

11 13 7.8e-05 0.0079 17.7 3.0 3 23 520 540 518 540 0.96

12 13 1.1e-06 0.00011 23.6 2.2 1 23 546 568 546 568 0.99

13 13 0.00021 0.021 16.4 1.0 1 23 573 596 573 596 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.3e-05	0.0013	20.2	2.1	1	23	134	157	134	157	0.96
2	13	0.00017	0.017	16.7	0.3	2	23	163	185	163	185	0.92
3	13	0.67	68	5.4	0.0	2	19	196	213	195	213	0.91
4	13	9.7e-06	0.00098	20.6	4.4	2	23	315	336	315	336	0.97
5	13	0.00012	0.012	17.1	5.6	1	23	342	364	342	364	0.93
6	13	0.0018	0.18	13.4	0.4	1	20	370	389	370	391	0.94
7	13	5.5e-05	0.0056	18.2	1.1	3	23	407	427	406	427	0.98
8	13	6.5e-05	0.0065	18.0	3.4	2	23	433	454	432	454	0.93
9	13	1.8e-06	0.00018	22.9	0.4	1	23	462	484	462	484	0.96
10	13	2.3e-06	0.00024	22.5	0.6	1	23	490	512	490	512	0.98
11	13	7.8e-05	0.0079	17.7	3.0	3	23	520	540	518	540	0.96
12	13	1.1e-06	0.00011	23.6	2.2	1	23	546	568	546	568	0.99
13	13	0.00021	0.021	16.4	1.0	1	23	573	596	573	596	0.97

Sequence Information

Coding Sequence: ATGAATGTTCATATATTGGATTTCGCCAATATATGTCGCACCTGTTTGAAAGCCGACAAGACTATGAGATCCTTGTTTCCGGACGACACGGATGAAGCAAATGAGATGCAAGAAATTCTGAGAATGATTGAAAATGTCGTAGATTATGCGGATTCAAATGCGAAAAGCTTTCCAAATAACATTTGTACAGAGTGCATCGGCCAACTACGCGCCTCGTACGATTTCAAAGCTCAATGTGAACGTTCCTTCGAAGTACTCTCGTCCATTCTAGACACCTGTACGTCCGGCTTGAAACAGGAGCCGGCGCTTGTTTTTATTGACGCCCAAGCGAAACCTGAAAATTTAAaagaggaagaggaagaaaatGAGCATGACGCCTTGCAGGAACTCAGCGGCGAATACAATTGTGCGTATTGTACCAAGTCGTTTAGACAGGAGGTTCATCTTCGCAAACATGTCGCCACATTGCACGCAAATGTCGAGAATACATGCAATTTCTGCGACAAGCAATTCGTCAGCGCGGCAAAGTTGAATAAGCACATTGCCGCGAACCATCCCGAAAGTTTTAACATCAAATGTTTGTTGAAATGTGAAAACTGTGAGGAAGAATTCGAAACGGAAGAGGCATTGGACGAGCATCCCTGTTCCGGTGATATATCCTTTGATCCAACCAATGTTGTTGAAATACTGGGCTTGGACGAGTCGCGTACACCCAAGAAACGTGTATTGTCCGATGATGACAATGACGATCCCGATTATGAAGGATTCAATGATCAGGACTCCGACGATGACGATGACAGTGGAGATGATGATAAAGTTCCACTGTCGAAACTCCTCAATACAACACCATCCCCGAAGAAAGGCAAGAAAAAGTCAAAAAAGAAAAGCAACGCTAATCAATCGCCCAAAGGCAATGACGACGCCAAAACGAACAAGGATAATCGATGTGATGTTTGCAGCAAAACATTCAAACGTGCGTCACATCTGAAGCGTCACAAAGTCACTCACATGGACGAGAAACCGTTCTCCTGTAATATTTGTCACAAGGGCTTTTCACGTGCCGATCATCTCCGGGCACATTCGTATCATCACGAAAACGTCAAGCCGTTTGTTTGTTCCAATTGCGATCGTGGATTCTTCACGGCCGAACGTCTTAAGCGTCATACAGACCGAAACTTTTGCGACAAAGACAAAAATCCAGCACCGAAAACCGAGTTCTGTAAGATATGCAACAAAGGATTCACGACAACTAAATATCTGGCGATTCATGAGCGGACTCATACAGATCGTAAGTGGAATTGCAAACATTGTCCGGAGACATTTACTACAAAGAAGGACTTGCAAAAGCACAATAAGGACCATTCGATTGAGACGGAAAGGCCATTTTTGTGCTCCGAGTGTGGTTTACGCTTTGTGCGTAACGATTATTTGATCATTCATATGCGACGACACAAGGGCGAGAAGCCGTACAAATGTAAGTTTTGCGGCAAAGGATTTCCACGTGCGACGGATCTCAACGTGCACGAAAGATACCACACGGGCGTTAAAACTCATTTGTGCACGACGTGCGGCAAAGGATTCCATCGAGCGTACAACCTACTGGTTCATACGCGAGTGCATACGGGCGAAAAACCATACAAATGTCCACACTGTTCGAAGAGCTTTGCACAAGGCAACGATTTAAAATCTCACATTCGACGACATACGGGTGAACGTTTCAAATGCGAAATTTGCGAGGAGGGATTCATTCAGGGCTATCATTTGACGCAACACAAGCGCAACGCGCATGGAATTGATACACAATCTCATATAAAGCGTGTCGCCAAATTCACGACCACAACGGAACAGGAAAAGCAAATGGAAGCTATGAAGCAACAAACTAAACCAACTGAAGAGGAGATGGTCGAGCATTATTTGCAGATTGAAATTAAACAGGAGGTTGTCGGCATATGA
Protein Sequence: MNVHILDFANICRTCLKADKTMRSLFPDDTDEANEMQEILRMIENVVDYADSNAKSFPNNICTECIGQLRASYDFKAQCERSFEVLSSILDTCTSGLKQEPALVFIDAQAKPENLKEEEEENEHDALQELSGEYNCAYCTKSFRQEVHLRKHVATLHANVENTCNFCDKQFVSAAKLNKHIAANHPESFNIKCLLKCENCEEEFETEEALDEHPCSGDISFDPTNVVEILGLDESRTPKKRVLSDDDNDDPDYEGFNDQDSDDDDDSGDDDKVPLSKLLNTTPSPKKGKKKSKKKSNANQSPKGNDDAKTNKDNRCDVCSKTFKRASHLKRHKVTHMDEKPFSCNICHKGFSRADHLRAHSYHHENVKPFVCSNCDRGFFTAERLKRHTDRNFCDKDKNPAPKTEFCKICNKGFTTTKYLAIHERTHTDRKWNCKHCPETFTTKKDLQKHNKDHSIETERPFLCSECGLRFVRNDYLIIHMRRHKGEKPYKCKFCGKGFPRATDLNVHERYHTGVKTHLCTTCGKGFHRAYNLLVHTRVHTGEKPYKCPHCSKSFAQGNDLKSHIRRHTGERFKCEICEEGFIQGYHLTQHKRNAHGIDTQSHIKRVAKFTTTTEQEKQMEAMKQQTKPTEEEMVEHYLQIEIKQEVVGI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -