Basic Information

Insect: Microchrysa polita
Gene Symbol: -
Assembly: GCA_949715475.1
Location: OX454417.1:5351139-5353675[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00047 0.047 15.3 0.7 1 23 164 186 164 186 0.98

2 15 0.24 24 6.8 0.3 1 23 216 238 216 238 0.96

3 15 6.1e-08 6.2e-06 27.5 0.6 2 23 273 294 272 294 0.98

4 15 2.5e-05 0.0025 19.3 0.6 1 23 300 322 300 322 0.97

5 15 7.3e-05 0.0074 17.8 4.0 1 23 328 350 328 350 0.99

6 15 1.3e-06 0.00013 23.3 2.2 1 23 356 378 356 378 0.98

7 15 6.4e-05 0.0064 18.0 0.5 1 23 397 419 397 419 0.98

8 15 0.00027 0.028 16.0 1.9 1 23 425 447 425 447 0.98

9 15 0.0016 0.16 13.7 1.1 1 23 453 476 453 476 0.95

10 15 3.4e-05 0.0035 18.9 0.9 1 23 556 578 556 578 0.99

11 15 8.7e-07 8.8e-05 23.9 0.2 1 23 584 606 584 606 0.99

12 15 4e-05 0.004 18.7 1.2 1 23 612 634 612 634 0.99

13 15 0.00056 0.057 15.0 0.8 1 23 640 663 640 663 0.96

14 15 0.49 49 5.8 0.3 1 23 671 693 671 693 0.97

15 15 0.0001 0.01 17.4 3.4 5 23 700 718 698 718 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00047	0.047	15.3	0.7	1	23	164	186	164	186	0.98
2	15	0.24	24	6.8	0.3	1	23	216	238	216	238	0.96
3	15	6.1e-08	6.2e-06	27.5	0.6	2	23	273	294	272	294	0.98
4	15	2.5e-05	0.0025	19.3	0.6	1	23	300	322	300	322	0.97
5	15	7.3e-05	0.0074	17.8	4.0	1	23	328	350	328	350	0.99
6	15	1.3e-06	0.00013	23.3	2.2	1	23	356	378	356	378	0.98
7	15	6.4e-05	0.0064	18.0	0.5	1	23	397	419	397	419	0.98
8	15	0.00027	0.028	16.0	1.9	1	23	425	447	425	447	0.98
9	15	0.0016	0.16	13.7	1.1	1	23	453	476	453	476	0.95
10	15	3.4e-05	0.0035	18.9	0.9	1	23	556	578	556	578	0.99
11	15	8.7e-07	8.8e-05	23.9	0.2	1	23	584	606	584	606	0.99
12	15	4e-05	0.004	18.7	1.2	1	23	612	634	612	634	0.99
13	15	0.00056	0.057	15.0	0.8	1	23	640	663	640	663	0.96
14	15	0.49	49	5.8	0.3	1	23	671	693	671	693	0.97
15	15	0.0001	0.01	17.4	3.4	5	23	700	718	698	718	0.97

Sequence Information

Coding Sequence: ATGTGCAAACGCTGCATCACGCGCTTGAAACTCTCCTACGAGTTCCGCCGGGAATGTCTCGTATCAGCCTCATATTTCGAGCATCTTCGTGCTTGCATCACCAAAATGAACGCCGAACTTACACAAGTGGCACACACAGCTATGACGGCCAAGCTATCTGTTTCCGACGAGGAATTGGAACTGTTAATGGAAGCTGGTTATAAATCCGAAGATATTCAAACGGTTCTCACGACGACGTCTCAAGAAGTTAGTCAAGATAGTAAGTCAATCCTACAAGAGAATCTCGCAATGGAACCGATTGCCGACGATGAAACTGATAAAACGGCAATCGACGATGAACCCCAGGACTATGAAGACAACTATGGCGAACCAGATCCTGACGTGGATGAGACGATGTATCAAATTGACGATGGCAATTGCATAGTGTCGGTTTCGACAAATCAAGAAGTCATACAAGTGGTGGAGAACATAAAAATTGAACAAGATCGCTACATGTGCTTGGAATGcaatatgcaattttttatcaaagccGAATTGCGGAAGCACATGGAAACGCATCGTGTGTTAGTGCAACCAATACATCAGGTGCAATCGAGGGAAAGCCATGAGTCAATATTGCCGGATGAAGGTGGTGCGTTAGCCGATTATATATGTGAGCATTGTGGAGATGGATTTGAAAGTCAGGAAATATTGGACTATCATGTGAAGACACATATGGAGAATGACGATGGAGATGACATGCAACAGTCTTTTGATGAAGAGGAAAATCTAGCGACTACGTCAGAAAACTCTGTTCCAACTGCGGATGCTGCAAACCAGTGTCAAGTATGCGGAAAAACATTTAGTCAACCCTATGGCCTGACATATCATATGAGGACGCATACGGATGAACGACCATATGAATGCGGTCAGTGTGGCGCACGTTTTCGGCAGAAGGGTAGCCTCAAGCAacacacatacatacacacGGGCGAGAAGCCCTATAAATGCGAATTGTGCGATAGAGGATTCACACAAAGCCATTCACTTACGTTTCACATGAGACGACATACAGGCGAGAGACCGTTCGTTTGTGATAAATGTGGAAACAGTTTTCGTCAAAAGGAATCGTTAAAGCATCACATGCTAGTTCATATGGACAATCGCATAGGTCGCAAAAAAGTGTCTGTGACGGATACCAATAATTGTTTTACTTGCGAAAAGTGTGGCAGCGTTTTCAACAAAAAAGGAGTTTTAAAGCAACACATGCTGATCCATACTGGAGAAAAACCTTACACGTGCGGCGTTTGCGGACGAGGCTTCACGCAAAGCCATTCCCTAACTTTCCATGCAAGACGGCATACCGGCGAGAAGCCGTATGCATGTGACAAATGCGGCGCTTTGTTTCGTCACGCCATCGGGCTGAAGcgacATCAATTTTCCAAGCATTCAGAGCCTCTGAAACCAGCTGAATCAGCGAGTCAATCAAAAAATCAGGAAACACAGAGTGTATCTATTCAAAATAAAGAACATTCTCCGTCGATCGAAAACGTACCCCAAGCAAATTCATCCATCATGATCGAACCTATGCCTGCACAAGAACCTACGAAAATTAGTGAAAACGCCAATGAATCTCAACCACCGGCATCTGACCAAATCCAGCCAACGACGACCGAATCTGCCCTCTATCGGTGTTCAATTTGCAAAGCCGGATTCAACACACAAGCAAAATACACCGAACACATGCAAACGCACGACAGCTCCAAACCGTATAAATGTGAAATATGTGGCAATGGATTTACGCAAAACGGTTCGTTGAAACAACACATGCTCATACATACGGGCGAACGTCCGTATAAGTGCGAAATTTGCGGACGAGGATTTACCCAAGGCAAATCTCTTACGTTTCACATGAGACGACATACCGGCGAGAAACCATTTAAATGTGAAATttgcaatttaagttttagtttGCGTGATATTTTGAAGCGTcacatacaacaacaacattcgaATGAGATGGAAAATACTTTTGTCTGTTCGGTTTGTTTGCGAGTTCATGGTTCGCAAGAAGATTTAGATGAGCATCTTCAAACGCActcgaaaaaatatatttgtcatTGTGGCAAGAGTTTTGTGACAAAATCGTCAATTCGACGACACCAAAAGACGCACGAAGTTTCTAGTGAATAA
Protein Sequence: MCKRCITRLKLSYEFRRECLVSASYFEHLRACITKMNAELTQVAHTAMTAKLSVSDEELELLMEAGYKSEDIQTVLTTTSQEVSQDSKSILQENLAMEPIADDETDKTAIDDEPQDYEDNYGEPDPDVDETMYQIDDGNCIVSVSTNQEVIQVVENIKIEQDRYMCLECNMQFFIKAELRKHMETHRVLVQPIHQVQSRESHESILPDEGGALADYICEHCGDGFESQEILDYHVKTHMENDDGDDMQQSFDEEENLATTSENSVPTADAANQCQVCGKTFSQPYGLTYHMRTHTDERPYECGQCGARFRQKGSLKQHTYIHTGEKPYKCELCDRGFTQSHSLTFHMRRHTGERPFVCDKCGNSFRQKESLKHHMLVHMDNRIGRKKVSVTDTNNCFTCEKCGSVFNKKGVLKQHMLIHTGEKPYTCGVCGRGFTQSHSLTFHARRHTGEKPYACDKCGALFRHAIGLKRHQFSKHSEPLKPAESASQSKNQETQSVSIQNKEHSPSIENVPQANSSIMIEPMPAQEPTKISENANESQPPASDQIQPTTTESALYRCSICKAGFNTQAKYTEHMQTHDSSKPYKCEICGNGFTQNGSLKQHMLIHTGERPYKCEICGRGFTQGKSLTFHMRRHTGEKPFKCEICNLSFSLRDILKRHIQQQHSNEMENTFVCSVCLRVHGSQEDLDEHLQTHSKKYICHCGKSFVTKSSIRRHQKTHEVSSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -