Mpol020284.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Microchrysa polita
Gene Symbol
-
Assembly
GCA_949715475.1
Location
OX454418.1:28108714-28130879[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0095 0.96 11.2 0.6 1 23 59 82 59 82 0.97
2 25 0.00041 0.042 15.5 1.0 1 23 152 175 152 175 0.96
3 25 0.0019 0.19 13.4 0.5 1 23 249 274 249 274 0.96
4 25 0.0044 0.45 12.2 0.7 1 23 317 342 317 342 0.97
5 25 0.16 17 7.3 2.2 1 23 348 373 348 373 0.96
6 25 0.0017 0.17 13.6 0.1 1 23 427 450 427 450 0.97
7 25 0.0025 0.26 13.0 0.9 2 23 463 484 462 484 0.96
8 25 0.93 94 4.9 3.1 1 10 491 500 491 513 0.80
9 25 1.1e-06 0.00011 23.6 0.8 1 23 519 541 519 541 0.99
10 25 2.7e-05 0.0027 19.2 0.7 1 23 547 569 547 569 0.98
11 25 0.00018 0.018 16.6 2.0 1 23 575 597 575 597 0.98
12 25 2.6e-05 0.0026 19.2 0.2 1 23 603 625 603 625 0.99
13 25 1.2 1.2e+02 4.6 0.8 1 10 631 640 631 643 0.93
14 25 0.054 5.5 8.8 4.1 1 23 690 715 690 715 0.97
15 25 0.0088 0.89 11.3 0.0 2 23 754 778 753 778 0.96
16 25 0.0078 0.79 11.4 1.6 1 23 797 820 797 820 0.97
17 25 0.21 21 7.0 0.6 1 18 829 846 829 846 0.93
18 25 5.6e-05 0.0057 18.2 0.7 1 23 864 887 864 887 0.97
19 25 0.00046 0.046 15.3 1.2 1 23 952 977 952 977 0.97
20 25 0.00038 0.039 15.6 0.3 2 23 1011 1035 1010 1035 0.95
21 25 0.00031 0.032 15.8 0.7 1 23 1061 1084 1061 1084 0.96
22 25 0.00016 0.016 16.8 0.1 2 23 1099 1121 1098 1121 0.96
23 25 0.0017 0.17 13.5 3.7 2 23 1134 1155 1133 1155 0.97
24 25 0.0038 0.38 12.4 1.4 1 23 1162 1184 1162 1184 0.94
25 25 1.1e-06 0.00011 23.6 0.5 1 23 1190 1212 1190 1212 0.98

Sequence Information

Coding Sequence
ATGGAAACTTGCGACGAGCCGTACGTCGATACGAGAGACGTATCAATAAAAGAAGAATTTGACTATGAAATCGAAAATGTGTCGCTCGAAGATTCGGCCAtttacaaaatcgattttacaaCACCCAAACCGAAATGTGGCGAAATTCTTGTGGAATGCAGTGGCAATTTTACATTTGTATGCACGCTATGTTCGCAGGAGTTCACGGATATGCAAAGTTTCGGCGTGCACATTCGTTCGAAGCATATTGTCTACGGACAGGATAAAAAGGATTTTCCATTGTTGCAAGGCGCTATTGGACCGGATCCATTGGATGCTGCTGTTGATGGATTGAATGAGAACATTGAAAAGCCGAAAACGGGCTCTGGTTATCGCGTCGACTCCTTAAAAAGCAAACCATACGCTTCAGCTGAAAAATTTCTTGGCAACGATATCGACGAGACTCTGCATGAATTTGCATGTGACATATGTTCGAAATCCTACCAGTACAAAACCTCCCTGGCAAGGCACAAGAGAAATGCACATCCGCCACCTGTAGAAGTGCAGATAATAATGGGATCACCGGGTTCTATCAATCTAGAACCGAAAAATGTTGACACGGATCTTATGTTACATTCAATCTTTGACAGTGAGCCCAACACATCGTCTCAAGACAATCAATATGATGTAAACCAAGAAAATTGGATTCACGAAACTACAGATGAAAGTGATTCTGATCAATCCGAATTTGATAGTGAGACGAAACACAAATGTCCCATGCCTGGATGTGGACGAAGctatgtatttaaaaagtccGTTTTAGTACACATGAAAAATGCACACTTAAAAAAAGAGAATCACTCAAGTAAAAAAGAGAATCATTCAAGtaaaaaagagaatcaatcaAGTTCAATTATAGGAGATACCGAGAAAAGCGAAGCTGATAAATCCGGGATAAGTATTCAAAAACACAAATGTCCAATGCCTGGTTGTGAACGGAGCTATGTTTACAGAAAGTCCGTTTTTGTACACATGAGAAATGCACACgggaatgaaaaatatttcaagtgtCAAATGCCCGGATGTAATCACATTTATATGATGAAAACCTCTCTTTTGGAACACATGCGACATGCACACATGAAAGCTAATGAAAACCCAAATGGAACGAAGGAGAGGCACACAGGCAAAATACCACCCGGAAATCATCAGGATGACGGTAGAGTTGGAGCGCAGAAAAAAGCTGTTCATGGGAATGACGGAGAAGACGCACAAAATCACAGTTACGGAGATAAAACATATACGTGTGTTATATGTGGCGAAATGTTCCCAAATGCAAAAGACCGTAAAATCCATAAAATCACAGATCACGGATTTCCAAATTTGTTGCCTCCAGACGATCCCTTAACATGTCCCTATTGtgataaaaaatgcgaaaatgAAAACGCCTTGCTACTGCACAAGGCTACTCACGGTCCCGGCGAGAATCGGTATCCATGCAAGCATTGCCCGAAAACATTCCAATGTCGTATGTCACGTTTGGAACACGAATCCACACACACAGGCGAACGTCATTTCAAATGTCCTCATTGCCCGAAGACATTTTCTAGCAGTGCAAACTTGGTCCCGCATATACGATCGCatttgaatattaaaaaattttcgTGTGCCTACTGTGATAAGCGCTTCGTTCAGAGTAACGAGTGGAAAGTTCACGAACGAACACATACCAGGGAGATATCGCATCAATGCGAGGAATGCGGTCAAGGCTTTATATCGGGCGCTAAACTGCGACATCACTTGCGTAGACATAGAAATATTCGTAACTATAAGTGTGATATTTGTCCGAAGGCTTTTTTTGAATTGGTCACATTGCAAGAGCACATCAGACGGCATACGGGCGAGCGGCCGTTTAAGTGTGATATTTGTGAAAAAGCTTTTTTCGAGGAGAAAATTATTGCCACAGCCAATTCAATCTGCAATGAAGACAAGAAACAGGAAAGCCAGGATAGCTCAAGTAACGAATCTGCAGAGAAAAGCGATTGCGATCAATCCAAACCGAAAAATGTCATTGAAAGTGTAATGAAACACAAATGTCCAATGCCCGGCTGTGAACATATCTATGCGTATAAACACTCTGTTACAAAGCACATGAAACGTATGCACCCGGGAGGTGTAATTGAACAAGGAACCCAAGCCAGTTCAATTATTGGAACTACAGGCAAAACCGATTGTCAACAATCCAATTCGTTGATTACTATTGAGCGCATAGAAAGACTCAAATGTCCGGTACCCGATTGTGAACGTCGCTATATCCGTGAAAAATCCGTCTTAGCACACATTAGGAGTATCCACCCAAGCGAGTTGATTCCGCCGCCAACGGATGACAATTCCGACTTGGAACAAGATTATCCATGCGACAAATGCAATCGAATTTATCTGAGCCAACATCAACTTACAATCCATCAAAAAAATGTTCATGCTAAGGACTATCCTAAGAAAACATTCACGTGCCCGGAATGTGACTATCGTGTCGACTCCTCAAAAAACTACCGACGTGAGTCCACACAAAAATCGCCTGCTGGGGGAATGGATGAGGCTCAGCAGAAATTTACATGCGAAATATGCTGGAGACCTTATAAATATAAGGCCACTCTACTACGGCACCAAAGACAGGAGCACATTTCACCTATGGATGTAAAGATGATACCGGGAACACCGTCACTGACAAACATTGACACCGCCCATTCCGCCTCCGACATGCAGCACGAAGACATGCAGCATGAAGGCTCGGATCACTCAAGTTCCGACACTACAGACAAAAGCGATAGCGACCAATCCGAACCGGAGAATATCGTTGAGAGTGTAACGAAACACAAATGTCCAATGCCTGGATGCGAACGAATCTATGCGAATAAACATTCTTTTGTAGCACACATGAGGCGTGTGCATCCTAAAGGTGTCATTGAGCAAGAACCCAAAGCCAATTCCGTTATTGAGCCATGTGCTTCTCAGCAGTCCCAACCGGTAAATATCATTGAGCGGAGACTCAAATGTCCAGAGCCTGGTTGTGAACGTCGTTATACCTATAAAAATTCCCTTTTAGCACACATGAGGAATAGACATCCAAAACCCAAAAAAAGTACCAAAAGAGAAATAGTTTCAAAACCGACGGAAAATGCTTCAGACACTGAAGAAGAATACGCATGCGACAAATGTGATCGAACTTATCCGGGTAAGCGTCAACTCAAAGTTCATCGAAAAAATGTTCATGAGAAGGCCACAGAAGCGGTTGAAAATTCTATGAGAACAATCACGTGTCCCGTATGTGGtgaaactttttcaaatccaCAAGAAATACGTTCCCATAAAATCACAGTTCACGGATTTCCAAATATGTTACCTCCTGACGACCCGCTTACATGTCGCTATTGtgatgaaaaatgtgaaaataaaaAGTCCCTACAACGACATACGGCTACACACAATGCATGCGAGAATCGCTATCCATGCAAGTATTGCAAAAAAGCATTTAAGACGCGTACAATGCGTCTTGAACATGAATCCGTGCACACGGGCGAACGTCATTACAAATGTCCTCATTGTCCAAAAGCGTTTGCTAGCAACCCAAATTTCCTGAATCATATACGAGCACATTTGCAaatcaaacgagaccgaggctaa
Protein Sequence
METCDEPYVDTRDVSIKEEFDYEIENVSLEDSAIYKIDFTTPKPKCGEILVECSGNFTFVCTLCSQEFTDMQSFGVHIRSKHIVYGQDKKDFPLLQGAIGPDPLDAAVDGLNENIEKPKTGSGYRVDSLKSKPYASAEKFLGNDIDETLHEFACDICSKSYQYKTSLARHKRNAHPPPVEVQIIMGSPGSINLEPKNVDTDLMLHSIFDSEPNTSSQDNQYDVNQENWIHETTDESDSDQSEFDSETKHKCPMPGCGRSYVFKKSVLVHMKNAHLKKENHSSKKENHSSKKENQSSSIIGDTEKSEADKSGISIQKHKCPMPGCERSYVYRKSVFVHMRNAHGNEKYFKCQMPGCNHIYMMKTSLLEHMRHAHMKANENPNGTKERHTGKIPPGNHQDDGRVGAQKKAVHGNDGEDAQNHSYGDKTYTCVICGEMFPNAKDRKIHKITDHGFPNLLPPDDPLTCPYCDKKCENENALLLHKATHGPGENRYPCKHCPKTFQCRMSRLEHESTHTGERHFKCPHCPKTFSSSANLVPHIRSHLNIKKFSCAYCDKRFVQSNEWKVHERTHTREISHQCEECGQGFISGAKLRHHLRRHRNIRNYKCDICPKAFFELVTLQEHIRRHTGERPFKCDICEKAFFEEKIIATANSICNEDKKQESQDSSSNESAEKSDCDQSKPKNVIESVMKHKCPMPGCEHIYAYKHSVTKHMKRMHPGGVIEQGTQASSIIGTTGKTDCQQSNSLITIERIERLKCPVPDCERRYIREKSVLAHIRSIHPSELIPPPTDDNSDLEQDYPCDKCNRIYLSQHQLTIHQKNVHAKDYPKKTFTCPECDYRVDSSKNYRRESTQKSPAGGMDEAQQKFTCEICWRPYKYKATLLRHQRQEHISPMDVKMIPGTPSLTNIDTAHSASDMQHEDMQHEGSDHSSSDTTDKSDSDQSEPENIVESVTKHKCPMPGCERIYANKHSFVAHMRRVHPKGVIEQEPKANSVIEPCASQQSQPVNIIERRLKCPEPGCERRYTYKNSLLAHMRNRHPKPKKSTKREIVSKPTENASDTEEEYACDKCDRTYPGKRQLKVHRKNVHEKATEAVENSMRTITCPVCGETFSNPQEIRSHKITVHGFPNMLPPDDPLTCRYCDEKCENKKSLQRHTATHNACENRYPCKYCKKAFKTRTMRLEHESVHTGERHYKCPHCPKAFASNPNFLNHIRAHLQIKRDRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-