Basic Information

Insect: Microchrysa polita
Gene Symbol: -
Assembly: GCA_949715475.1
Location: OX454417.1:96794561-96804057[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0016 0.16 13.6 0.2 1 23 160 182 160 182 0.98

2 20 2.3e-06 0.00023 22.6 1.1 1 23 187 210 187 210 0.96

3 20 0.0012 0.12 14.1 2.4 2 23 216 238 216 238 0.96

4 20 2.5e-07 2.6e-05 25.6 0.2 1 23 246 268 246 268 0.98

5 20 0.001 0.1 14.2 1.5 1 23 274 296 274 296 0.98

6 20 2.4 2.5e+02 3.6 3.1 1 23 325 347 325 347 0.84

7 20 1.2e-06 0.00012 23.4 0.4 1 23 353 375 353 375 0.98

8 20 0.00089 0.09 14.4 2.6 1 23 381 404 381 404 0.98

9 20 6.6e-05 0.0066 18.0 2.9 1 23 410 432 410 432 0.97

10 20 5.9e-05 0.0059 18.1 3.3 1 23 438 461 438 461 0.98

11 20 0.0058 0.58 11.9 0.6 1 23 662 684 662 684 0.98

12 20 3e-06 0.00031 22.2 0.5 1 23 689 712 689 712 0.96

13 20 0.006 0.61 11.8 2.7 2 23 718 740 718 740 0.96

14 20 1.8e-06 0.00018 22.9 1.6 1 23 747 769 747 769 0.97

15 20 6.7e-05 0.0068 18.0 0.7 1 23 775 798 775 798 0.97

16 20 0.38 39 6.1 4.0 1 23 829 851 829 851 0.95

17 20 4.7e-08 4.8e-06 27.9 1.3 1 23 857 879 857 879 0.99

18 20 0.00011 0.011 17.3 3.3 1 23 885 908 885 908 0.98

19 20 6.1e-05 0.0062 18.1 3.0 1 23 914 936 914 936 0.97

20 20 0.0015 0.15 13.7 0.8 1 23 942 965 942 965 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0016	0.16	13.6	0.2	1	23	160	182	160	182	0.98
2	20	2.3e-06	0.00023	22.6	1.1	1	23	187	210	187	210	0.96
3	20	0.0012	0.12	14.1	2.4	2	23	216	238	216	238	0.96
4	20	2.5e-07	2.6e-05	25.6	0.2	1	23	246	268	246	268	0.98
5	20	0.001	0.1	14.2	1.5	1	23	274	296	274	296	0.98
6	20	2.4	2.5e+02	3.6	3.1	1	23	325	347	325	347	0.84
7	20	1.2e-06	0.00012	23.4	0.4	1	23	353	375	353	375	0.98
8	20	0.00089	0.09	14.4	2.6	1	23	381	404	381	404	0.98
9	20	6.6e-05	0.0066	18.0	2.9	1	23	410	432	410	432	0.97
10	20	5.9e-05	0.0059	18.1	3.3	1	23	438	461	438	461	0.98
11	20	0.0058	0.58	11.9	0.6	1	23	662	684	662	684	0.98
12	20	3e-06	0.00031	22.2	0.5	1	23	689	712	689	712	0.96
13	20	0.006	0.61	11.8	2.7	2	23	718	740	718	740	0.96
14	20	1.8e-06	0.00018	22.9	1.6	1	23	747	769	747	769	0.97
15	20	6.7e-05	0.0068	18.0	0.7	1	23	775	798	775	798	0.97
16	20	0.38	39	6.1	4.0	1	23	829	851	829	851	0.95
17	20	4.7e-08	4.8e-06	27.9	1.3	1	23	857	879	857	879	0.99
18	20	0.00011	0.011	17.3	3.3	1	23	885	908	885	908	0.98
19	20	6.1e-05	0.0062	18.1	3.0	1	23	914	936	914	936	0.97
20	20	0.0015	0.15	13.7	0.8	1	23	942	965	942	965	0.98

Sequence Information

Coding Sequence: ATGGCCTACGAATTCAAAACACAATGCGAACAAACGGATAAATCACTTCGTCAAAAACTTGCACTACTCGACAATGTATCGTACGAAATGGTTGCATTTGAACCAATCGCACCAGAGCCAATCGCACCGCAGCCAATCGCACCAGAGCCAATCGCACCGCAGCCAATCGCACCGCAGCCAATCGCACCGGAACCAATCGATTCCGATTTGAGTGTAGAGAGTATTgttaaagaagaagaacaaatcAGCGAAGCTAACGTTTCTGCTCTCTCACCAGACACTAATTCTACTATTGATCCTGCGCAGCCGTTAAGTTTTGAAGAAGTTCTACTGGAACGGGTGGAACATGTCTCCAGTATGAATAATTCCATTGATGAACCGTTACCTGAGTCAAATGACTCTATTCCGAAGACTGCACAACCTTCTATTAGACTGAAACGAAAATATCAGCGACGACGGgagaaaattgtaaaaactttCACATGTCCTGCGTGTCCAGCCTCGTTCACCGTTTTTTCTGATTTCCTTGCACACAAGAAAACACACGGTGAAAATTTGTATGTGTGCCCCATATGTAAAAAGGGTTTTAAGCGTAATAGTCTTTTAAAAATGCACACTAAATTAAATCATCCCACCAGCCCGGCAACCTGTAATGTGTGCAATAAGGACCTGGCGAATAAATACACACTGCGAAATCATATAAGGGAATGCCATGAAAAAGATAAGAAAACGCCATATCCGTGCAAGATTTGTGGCAAGGCGTTTTATCGTAAATCCAACATGATAGTGCATATGGATGTGCACAACCCAGAGCCGATCTATGCCTGCGATCAATGTCCTTCGAAATTTAAAACAAGTTATGGTCTGTACCTGCACAGGCGAAAACATGGCTCCAAAGAagataaaatttccaatccgAAAAGTAAACGAACACAGCGAACACCGAAAAATATACCGCAAAAGAAAAATCCTCATGTATGCGAGCATTGCGGTAAAGTAAGTGGAAGCATGGCTACACATCTGGTTCACTTTCGAACTCACTCCGGCGAAAGGCCCTATGTATGCACGGTGTGCAAGAAAACGTTCATACAACAATCGTCACTGATTGCGCATAGCCGTGTTCACACGAACGAAAGGCCATATTCCTGTAATTTATGCGAAATGAAGTTTCGACAAGGCAACCATTTAAGGACACATGTAAAAACAATTCACAAACAGTCCCGACCGCATAAATGCGAATGTTGTGGAAAGGCGTTTTCGACGGCCGGAAATCTAAGGACTCATGTTCGCCTACATACGGGGGAAAAACCTTTTAAATGTAAACAGTGTCCGATGTGTTTTGTGGACTTGAACGGTTTGAAGAGACATCGACGTAAGGAGCATTCGGATGAGTCTGGTAATAAGGACAACGCTGGcgatttgaataaatttgatgATAAAGTCAGTTCTGACGAGCCCAACAGTGAGGAGAGAATTGCATCACCAAGTGACGCAAATGAGCTGGAGTCAAGTTTGGCTGCTCTACTTGAGGAGGATACTGATGAATCGTATGCTCAACACGACCAGCTACCCCAACAAATTTGCTATAGTTGTGAAAATAGCCTGGAAATGGCCTACGAATTCAAAACACAATGCGAACAAACGGACAAGTCACTACGTCAGAAGCTGGCACTACTCAATGAAGTACCGTACGAAATGGTTGCATTTGAACCCATCGCACCAGAGCCAATCGATTCCGATTTAAGTGAAGAGAGTAGCACtgttaaagaagaagaaaaaatcagCGAAGCTAACGTTCCCGGTCACTCACCAGACACTACTGATCCTGCGAGGCCGTTAAATTTTGAAGAAGTTCTACTGCAACGGGTGGAAAATTCTATTGGCGCTCCGTTACCTGAGTCAAACGATTCTGTTCGACATACTGAAAAAACTTCTATGGGAGTGAAAGGAAAATGTAAGCGACGCGAGAAAATTATAAAGACCTTTACATGTCCTGCGTGTCCAGCTACATTTACCGTTTTTTTCGATTACCGTGCACACAAAAAAACACACGGTAAAAATCTGTACGTGTGTCCCATATGTAATAAGGGTTTTACGCGTAATAGTCGTCTAAAAACGCACACTGAATCGATTCATCCCAGTAGCACGGCAACCTGTAATTTGTGCAATAAGGAGCTGGCGAGCACATACACACTGCGCAAGCATATAAGGGAATGCCACGAAAAAAAGAAGACGCCTCATCCTTGTAAGATTTGTGGCAAGACGTTTTATCGCAGAGCCAACATGAGATCGCATATGGATGTGCACAACACAGCGCCGATCTATGCTTGTGATCAATGTCCTTTGAAGTTCAAGAGGAATGATGCTCTGTTCATGCACAGGCGACGAGAACATAAATCCAAAGAAGATAAAATTTCGAACCCGAAAAGTAAACGTACACACTCGAAAAATAAACGTACACAGTCGAAAAACCCGCAACGTCCTCACGTATGCGAGCATTGCGGTAAAGTAAGTGGAAATAAGGCTTCACATCTGATTCACTTTCGAACTCACTCCGGCGAAAGGCCCTATGTATGCAAGGTGTGCAAAAAATCGTTCACAAATCAATCGTCACTGACTATGCATATCCGTGTTCACACGGACGAAAGGCCATATCCCTGCAATTTTTGTGAAATGAAGTTTCGACAAAGCAACCATTTAAAGACACATGTAAAAACAATTCACAAACAGAACCGCCCGCATAAATGCGAATGTTGTGGGAAAACGTTTTCATCGGCCGGAAATCTAAGAATACATGTTCGACTACACACGGGGGAAAAACCTTACGAATGTAAGCAGTGTGCGATGAGTTTTATGGATGTGAACGGTTTGAAGAGACATCGACGTAAGGAGCATTCGGATGAATCCGGTAATAAGGAAGTTGCTGGCGGTGGCGATTCGAATGAAGATGTCGATCAAGTCAATTCTTACGATCCCAACGGTGAGGAAAGAATTGCGTCTCCAAGTGACGCAAATGAGCTGGAGTTAAGTTTGGCTGCCGTACTGGAGGAGGATATTGAAGATTCGTGTGCTTGA
Protein Sequence: MAYEFKTQCEQTDKSLRQKLALLDNVSYEMVAFEPIAPEPIAPQPIAPEPIAPQPIAPQPIAPEPIDSDLSVESIVKEEEQISEANVSALSPDTNSTIDPAQPLSFEEVLLERVEHVSSMNNSIDEPLPESNDSIPKTAQPSIRLKRKYQRRREKIVKTFTCPACPASFTVFSDFLAHKKTHGENLYVCPICKKGFKRNSLLKMHTKLNHPTSPATCNVCNKDLANKYTLRNHIRECHEKDKKTPYPCKICGKAFYRKSNMIVHMDVHNPEPIYACDQCPSKFKTSYGLYLHRRKHGSKEDKISNPKSKRTQRTPKNIPQKKNPHVCEHCGKVSGSMATHLVHFRTHSGERPYVCTVCKKTFIQQSSLIAHSRVHTNERPYSCNLCEMKFRQGNHLRTHVKTIHKQSRPHKCECCGKAFSTAGNLRTHVRLHTGEKPFKCKQCPMCFVDLNGLKRHRRKEHSDESGNKDNAGDLNKFDDKVSSDEPNSEERIASPSDANELESSLAALLEEDTDESYAQHDQLPQQICYSCENSLEMAYEFKTQCEQTDKSLRQKLALLNEVPYEMVAFEPIAPEPIDSDLSEESSTVKEEEKISEANVPGHSPDTTDPARPLNFEEVLLQRVENSIGAPLPESNDSVRHTEKTSMGVKGKCKRREKIIKTFTCPACPATFTVFFDYRAHKKTHGKNLYVCPICNKGFTRNSRLKTHTESIHPSSTATCNLCNKELASTYTLRKHIRECHEKKKTPHPCKICGKTFYRRANMRSHMDVHNTAPIYACDQCPLKFKRNDALFMHRRREHKSKEDKISNPKSKRTHSKNKRTQSKNPQRPHVCEHCGKVSGNKASHLIHFRTHSGERPYVCKVCKKSFTNQSSLTMHIRVHTDERPYPCNFCEMKFRQSNHLKTHVKTIHKQNRPHKCECCGKTFSSAGNLRIHVRLHTGEKPYECKQCAMSFMDVNGLKRHRRKEHSDESGNKEVAGGGDSNEDVDQVNSYDPNGEERIASPSDANELELSLAAVLEEDIEDSCA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -