Mpol030306.1
Basic Information
- Insect
- Microchrysa polita
- Gene Symbol
- -
- Assembly
- GCA_949715475.1
- Location
- OX454420.1:39710207-39710795[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-10 3.1e-07 31.1 0.0 1 42 18 59 18 61 0.94 2 2 2.6 3.3e+03 -0.9 0.0 17 22 136 141 132 149 0.60
Sequence Information
- Coding Sequence
- ATGCCCCGAGTATACAAAAGATCGTCAGCAGCAACCAACCGAGGTGCTTGGACCGAGGAGCAACTCCGGGAGGCGGTTTCGAAGGTTATATCCGGTGAAATAAGTAAAAGAGAAGCTCAACGTAGGTATAATGTACCACCGAGGAACTTAGATCGAAGAATAAGGTCTGGGAACATGGAGAAGGGGAGTCTCGGACCACAAGGTATATTtggaaaacaaaatgaaaagagGTTAGTCGAACATATCAAAAGACTAGCTGCTTCTGGATTTGCTCCCGATCGAGAAACAGTACGGATCATGGCCTATAAGTTCGCGGAAAAACTGAATATAAAGCATCCATTTTGCGATAGTGCCGGAATGGCTGGAGTTACTTGGCTACAATCATTTTTAGATAGGAATCCAGAGCTTTCCATTCGACAAGCTGAAGGGCTTTCCCTGGCAAGAGCTAAAGGGATGAACGTCGATGACGTTAAAGCTTTCTTCGAACTGCTGGAAAAAGTTATCACGGAAAACGGATTTTAG
- Protein Sequence
- MPRVYKRSSAATNRGAWTEEQLREAVSKVISGEISKREAQRRYNVPPRNLDRRIRSGNMEKGSLGPQGIFGKQNEKRLVEHIKRLAASGFAPDRETVRIMAYKFAEKLNIKHPFCDSAGMAGVTWLQSFLDRNPELSIRQAEGLSLARAKGMNVDDVKAFFELLEKVITENGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -