Mpol017298.1
Basic Information
- Insect
- Microchrysa polita
- Gene Symbol
- -
- Assembly
- GCA_949715475.1
- Location
- OX454417.1:62288713-62290434[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-12 1.8e-09 38.3 0.1 1 39 18 56 18 60 0.93 2 2 3.9 4.8e+03 -1.5 0.0 16 23 135 142 132 144 0.78
Sequence Information
- Coding Sequence
- ATGCCTACGCAATACAAGCGAAAACCTGGTGCTATCCAGAGGAGACAATGGAAGAATGAACAGCTTATCGAGGCAATTGCCAAAATAAAATCCGGTGAGATGGGAGTCAATGCAGCGAGTCGGAGCTATGGTATACCATCCAGAACCCTGCGCAGAAGATTAAAATCCGGGGTCGTTACCGACATTCCCCTGGGTCCTCAAGGCATATTGGGCATTGAAAACGAGAAACGCTtggtgaaacatattaaaaggCTGGAGAAAGTAGGTTTCGCGCCTGATAGAGATGGTATAAGGTCCTTGGCATTTCAGTTTGCCGAAAAACTAGGAAtccaacacaaatttaatcaagATACCAAAATGGCGGGATATGACTGGTTAGATTCATTTCTGCGCAGGAACAGCGAGTTAAGCGTCAGGCAGGCCCAAGGCTTATCACTTGCACGTAGCGAAGGAATGAATCGTCAGGAAGCGAACGATTTCTTTAAAATCCTTGAAACTGTTTTCACGGATAATGACATGTTCAACAAGCCCGCTAATATTTTTAACATGGACGAAACCGGGTTTCAGTTGAATAACGAAGCTGGCACAGTTGTGGCTTCAAAGGGAGCGAGAAATGTTCACACTCTAATTTCCAGCGAACGTGGTGAGAATGTTTCGATTATTGCATGTTGCAGCGCTGAGGGTCTATTTCTCCCCCCTGTGGTGATTTTTAAAGGCGTTAGAGAGAAAAAAGAATTTGGAGATGGCCTTCCGCCTGGTAGTAAGGTTTTTATGAATCAAAAATCATCCTTTATTACGTCTGAGCTATTCTTCAAATGGCTCAACGAGCATTTCGTGCCAAGAAAACCATTAGGTAGAACAATCCTTATTTTAGATGGGCATTCATCGCATCGGAATTCGTTAGAGATGCTAGACTTTTCTGAGGAGCATGAGATTACATTGGTCTGTCTGCCGAGTCATACAACTCAAGCACTGCAACCTTTGGACAGATCATTCTTTAAATCACTAAAGCATAATTTGAAGAGGGAGGCTAGAACATACATGCTGAATAGCCCTGGAAGAAAGATTACGCGTCTTCAAGCTGGTGGGATCATTGGAAACGCATGGAGCAAGTCAGCGTCTGTTGACATTGCAATGTCCGGGTTTAGAGCCTCAGGAATATATCCCCTTAATCCAAATGCTATCCCGGAACATTTCTATTCAATCTCTGATGCTGCGGAAGATGTTCCAGATAGGCAAGCCAATATCGAGGTTTCCGAAACTGCCCAAGACGACCAAAATGCACCAAGTGCAAGTGAAAATTCAAGTCCTTCGAAGTTTCTTTTGGACATTAGTCCAATTCCCATTTTGAAGGacagaacaaataaaaaaagaaagcaATCGGCGGAAATCTTAACGCCAACGAGTTTAAAAAAGCCCGGGTCAAGTGGTAGTAGAAAAAAGGAGAATAGAACCACCCAGCGTGGAGTGCATCACGTTACAGGTGATGACGACAGCAACACTTTCTTCCCCGAAACGACTTCAACCTCAAAGAAACATATAGATGACGACCGATGTGCAGAATGCTTGGAATTGTATGCAAAAACGCGAGAAAGAGTGGACTGGTTACAATGCCTTAACTGTAAAAAATGGTTGCATGAGACATGTACCATGTATCAAGAAAAGTGTAATTTATGTGGTCGCCAAGAAATACGTcttaaaaagcaaaaaaaatctaattaa
- Protein Sequence
- MPTQYKRKPGAIQRRQWKNEQLIEAIAKIKSGEMGVNAASRSYGIPSRTLRRRLKSGVVTDIPLGPQGILGIENEKRLVKHIKRLEKVGFAPDRDGIRSLAFQFAEKLGIQHKFNQDTKMAGYDWLDSFLRRNSELSVRQAQGLSLARSEGMNRQEANDFFKILETVFTDNDMFNKPANIFNMDETGFQLNNEAGTVVASKGARNVHTLISSERGENVSIIACCSAEGLFLPPVVIFKGVREKKEFGDGLPPGSKVFMNQKSSFITSELFFKWLNEHFVPRKPLGRTILILDGHSSHRNSLEMLDFSEEHEITLVCLPSHTTQALQPLDRSFFKSLKHNLKREARTYMLNSPGRKITRLQAGGIIGNAWSKSASVDIAMSGFRASGIYPLNPNAIPEHFYSISDAAEDVPDRQANIEVSETAQDDQNAPSASENSSPSKFLLDISPIPILKDRTNKKRKQSAEILTPTSLKKPGSSGSRKKENRTTQRGVHHVTGDDDSNTFFPETTSTSKKHIDDDRCAECLELYAKTRERVDWLQCLNCKKWLHETCTMYQEKCNLCGRQEIRLKKQKKSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00999501;
- 90% Identity
- iTF_00999501;
- 80% Identity
- -