Mpol007957.1
Basic Information
- Insect
- Microchrysa polita
- Gene Symbol
- bab1
- Assembly
- GCA_949715475.1
- Location
- OX454416.1:11188-12488[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-17 3e-14 53.6 0.0 1 43 28 71 28 73 0.95 2 2 0.35 4.3e+02 1.9 0.5 2 15 163 176 162 190 0.78
Sequence Information
- Coding Sequence
- ATGTGGCAGAAATGTTGGAATACAAATCAAAATTTAATGCATCATTTACGATTTCGAGAACGTGGGCCTCTAAAGTCATGGCGTCCTGAAACAATGGCCGAGGCTATATTTAGTGTTCTAAAGGAAGGACTATCCCTTTCCCAAGCGGCTCGAAAATATGACATTCCATATCCAACTTTTGTTTTATATGCAAATCGTGTCCACAACATGCTGGGACCTTCAATTGATGGTGGAACTGATTTGAGACCTAAGGGAAGAGGTAGACCGCAGCGAATATTGCTGGGTATCTGGCCGGATGATCACATCAAAGGCGTAATTAAGACTGTTGTTTTTAGAGATGCAAAGGATATAAAAGAGGAAGGAATGCATTTGTCATATGGCAGACATTCGCCAGTCTTTCCATTTCAAGAGGGCCAACTAAATTACCCCGGTGCTGCAAATGGACTTCCACAGCAATCAACACCAACGAATGCAGACTCAATGTCACCGGAAGCAACAGCAGCTGCTGTTGCAGCAGTAGCACATGGCATCCGCCAGCAAATGCAAATGGTTGCCGCTGCCCAGCATCATCCTGAGACCCAAACTGCCGCACTATTTAATTTGCCGCCTCACATGCATGCTAATAATGGTGGGGCCCCCATTCCTAAGCAAAACTCACCAGCATCTAGTAGTTCGCAAAGACACAATTCTCCATCAATGCCTGGACTTTCAAATACAGCAGCAATTGGTATGACTGGAATTCATATTATGCCAGGACTATGTGCAAATGCAAATATATCAACCAATACAACGTTTACTTCCACAGCTAGTACTCAACAAGGCCCACCGACATTAAGCGCGACTTGTCCATCCGGCGACTCTGCCGCTATCATTTCTGGGAATAATTCGCCGATAACTGCCGCCCATGATTTGCGTATAAATAGTCCTGATGAGAGCCCTTTGAATTCACCCTTAGAGCTTTCATTGGAGCCCGCAGTGAATCTCGCGGTAGGTGTGAGTGGGATGGCCTATAAACCACCAAGAGGGTATTCATCTCCCCGATCCGATACTCTTTTTCAGGAGAATATTGCCGATCTAGTTAGTCGGAACTCACACTCTTCCagcatgactaattttaaggaaccTGGAAGTAGCATAAAACTTGAGCCAATAGCTGAATGCCGTTCCGAATaa
- Protein Sequence
- MWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDDHIKGVIKTVVFRDAKDIKEEGMHLSYGRHSPVFPFQEGQLNYPGAANGLPQQSTPTNADSMSPEATAAAVAAVAHGIRQQMQMVAAAQHHPETQTAALFNLPPHMHANNGGAPIPKQNSPASSSSQRHNSPSMPGLSNTAAIGMTGIHIMPGLCANANISTNTTFTSTASTQQGPPTLSATCPSGDSAAIISGNNSPITAAHDLRINSPDESPLNSPLELSLEPAVNLAVGVSGMAYKPPRGYSSPRSDTLFQENIADLVSRNSHSSSMTNFKEPGSSIKLEPIAECRSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00322341;
- 90% Identity
- -
- 80% Identity
- -