Mpol012427.1
Basic Information
- Insect
- Microchrysa polita
- Gene Symbol
- ttk
- Assembly
- GCA_949715475.1
- Location
- OX454416.1:108763503-108774208[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-07 0.00016 22.5 0.1 3 43 242 282 240 284 0.83 2 3 0.17 2.1e+02 2.9 0.0 28 39 313 324 312 330 0.86 3 3 1.3e-14 1.6e-11 44.8 0.1 2 43 347 387 347 388 0.94
Sequence Information
- Coding Sequence
- ATGCATCATCTAAAATGGATGACCCACGCCGATACGATTATGGAGTTGCAACGCAATCTGCAGAACGACGAATCGACGTGTGACGTTTGGATAAAATCAGACAGAGGAGTCGTATTTCGGGCACATCGCTTTCTACTCTGTTTTTGCAGTGACTATTTCAAAGAAATGTTGCGAGATGTTCCGCCCAATCAGGACGCTACAATTATTATGCCCGAAGTGCGACCGAGCATCTTGAAGACAATTTTGGATTTTATCTATTTAGGCGAGGTGGGCGTCGCGTCCGAGGATATGAGTGATTTTTTCAATGCCTTCAACTTGCTGGAGATCAAGAGTGGGATCAATTGTGAACGACGTATTATTCCCAAATTGGAGTATCAGGAGAAGCCGTTGACGATTGAGCCTATTGATGCGATTGAGATTGAGGTGCAGCATCACAGTGATGTGGATAAACCAGAGGACCTGGCTAGCATTCAACATGAAAAAACCACCGAATATATGGAAGTCTTTGATACGCACAATCAGTACACGATTGAACAGACAACGGACGGCTACATTGTATCGGAAAACTCACAATCACAATTCATCATGCCAACAGAAAATAGCCAACCTGAAATCATCGCCATCGGTACAACCGATTCTGCAGAAACATCCGGAGTGACGACtgacaaaattgaatttcttGAAAACAATACCATTTCTCCAGTCCAATACAATTCACGAAGCGAAGCAATTGAAGCGGCTGTTGAAGAGATGGAAAATGTCGGCATAAGCCTGAAAACGGCATCCCTAAAGTATAATGTATCTAAAACAGTTTTGTGGCGTCATATGCGCAAGCGTGGCGGCTATAAAGCTCCACGTGAGAATCCAATGCTTGCACAGGCCATTAAAATGTTGGAAAATGGTGAATCATTTAAGACGATCACGCAAACTGTTAAGATACCTCTGTCGACGTTACATCGACATAAGATGCGCTTGCTCGAGCAAGGTCGACTTCCCGAACATGTTAGTGAAAAGATTCGCAAATCGAAGGATAATTTTCGCGAGCGGATCGGGGAAGCGATTAGTGCTTGTGCGAGAGGTATGTCGCAAAATCAAGCTTCGGCTCTTTATTCGGTGTCGAAATCAACATTGTGGCGTCATTTTCAAAAACACACAAACTCTATGATAGTGGAAAGTGTCGATCATAGTGGAGCCGATGTATCGTCATGTATGGATATTGTTGCAAGCGAGGGGGACGAGAGCGATCCACATTAG
- Protein Sequence
- MHHLKWMTHADTIMELQRNLQNDESTCDVWIKSDRGVVFRAHRFLLCFCSDYFKEMLRDVPPNQDATIIMPEVRPSILKTILDFIYLGEVGVASEDMSDFFNAFNLLEIKSGINCERRIIPKLEYQEKPLTIEPIDAIEIEVQHHSDVDKPEDLASIQHEKTTEYMEVFDTHNQYTIEQTTDGYIVSENSQSQFIMPTENSQPEIIAIGTTDSAETSGVTTDKIEFLENNTISPVQYNSRSEAIEAAVEEMENVGISLKTASLKYNVSKTVLWRHMRKRGGYKAPRENPMLAQAIKMLENGESFKTITQTVKIPLSTLHRHKMRLLEQGRLPEHVSEKIRKSKDNFRERIGEAISACARGMSQNQASALYSVSKSTLWRHFQKHTNSMIVESVDHSGADVSSCMDIVASEGDESDPH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00999774;
- 90% Identity
- iTF_00999774;
- 80% Identity
- iTF_00999774;