Mdis024333.1
Basic Information
- Insect
- Micraspis discolor
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_030674115.1
- Location
- JARTUT010001312.1:217834-224213[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 4.9e+04 -7.8 5.6 15 19 151 155 150 155 0.81 2 18 0.087 2.1e+03 0.2 0.4 4 10 186 192 185 192 0.96 3 18 1.7e-06 0.042 15.3 19.0 1 18 200 216 200 217 0.99 4 18 0.00066 16 7.0 16.4 1 19 253 271 253 271 0.91 5 18 1.3 3.3e+04 -3.5 1.0 6 10 296 300 295 300 0.88 6 18 5e-09 0.00012 23.4 7.8 1 18 306 323 306 324 0.97 7 18 1.3 3.1e+04 -3.5 1.0 5 10 348 353 348 353 0.86 8 18 8.7e-06 0.21 13.0 15.0 1 18 359 376 359 377 0.97 9 18 0.98 2.4e+04 -3.1 1.3 1 4 386 389 386 389 0.97 10 18 5.2e-05 1.3 10.5 16.8 1 18 411 428 411 429 0.94 11 18 8.6e-10 2.1e-05 25.8 12.1 1 18 438 455 438 456 0.97 12 18 0.00027 6.7 8.2 6.8 9 19 504 514 503 514 0.92 13 18 0.058 1.4e+03 0.8 4.6 4 12 526 534 524 534 0.88 14 18 1.6 3.9e+04 -3.8 4.2 14 18 562 566 559 567 0.66 15 18 0.021 5.2e+02 2.2 7.1 1 11 603 613 591 614 0.86 16 18 5.4e-07 0.013 16.9 18.7 3 19 643 659 642 659 0.94 17 18 1.2e-05 0.3 12.5 13.3 1 19 702 722 702 722 0.95 18 18 1.2 2.9e+04 -3.4 0.8 6 10 752 756 751 756 0.89
Sequence Information
- Coding Sequence
- atgaaTAACCGTAAAAAGCAAGGTAATTCAAATCCTTGGAAGAAAATTCCACAAAAGGCTCCTACAGTCGATAAGTTTGAGGAAGCACGAAAAAAGAATCAAGCATCTGTCCAAAAGCATATTGAAGAATATGAATCTTCCTCCGATGAGGAAGAAGTAGAAACTAAAACCGTAAtagACCAAATTACTGCATCTTACACAACCAAAGGAGGATCCTGTGACAAATTACAAAGAACAGTTTCTTATCTAAGAGATAACCTTACCTCAGGTGCTACCACCTGTTTAATTTGTATTTCCAAAATTAAAAGGGATGACCAGATATGGTGTTGCAAGTCTTGTTATTGCATTTTCCATTTAGTTTGTATCCAGAGATGGTCGAAAGATAGTATATCCCAGAAGAAACACTCAATTTCATCTCAGTCTCTCTCTGGAGAACAAATTCTTTGGTGCTGTCCAAAGTGTAGAAATAATTATAAACCAGAAAACATTCCAACAGAGTATAGATGTTTCTGTAGTAAAAAGGTTAATCCGACTTACCAGACCTTGTTAGTTCCACACTCCTGTGGTGAACTATGTGGAAAGGAATTACAACCACCCTGTGGACACAAATGTTTCCTTCTTTGTCATCCAGGGCCATGTCCTCCATGTTGCGCGACTGTTAATGCCAAATGTTATTGTGGTGCGAAACCACCTAGGCTCCAAAGATGTAGCGATAAATATTGGTCATGTGGGGGCACCTGCGACAAGTTACTCGAGTGCCGTAAACATCATTGCGATGATCCATGTCATGGAGGAGTTTGCAAACCATGCTcgaagaagataatccagaagTGCAACTGCAAATCGCAAGCAAAACTGAGAGATTGCTCTTCTCCCGAGTGGCAGTGTGACAAGgtgTGTGGAAAGCTTTTCAGTTGTGGCATACACAAATGTATGGAAATTTGCCATGCAGGTGTTTGCAATGTCTGTGAATTGAGTTTACCAAGAACATGCCCATGTGGAAAAACTAAGTTCAACCTTCCTTGTACTGAAGACACCCCAACTTGTCCTGATACATGCGATAAACTTCTAGAATGCGGAGAGCATCATTGTGTCTTGAAATGTCACAAGGGTAAATGTGGAACGTGCTTGGAAATAGTCAAGAAACAATGCAGATGTGGGCAACACATTAAAGATGTGCAGTGTAGTAAGCCCTTCTATTGCGAGACTAAATGTAAGAATTTGAGAGACTGTAACAAACATTCTTGTAATAAAAAGTGCTGCAACGGAGAATGTCCACCATGTGAAAAACCTTGTGGAAAAACCTTGAAATGTGGTATCCACAAATGCCCATCTGTTTGTCATCGGGGTCCATGTTTTCCCTGCAATTTAACTGATGTTGTGAGTTGCAATTGTGGTGAAACCAAAATAAGTGTGCCTTGTGGTAGGAAGCATCATGTTAAACCCCCAAAATGCTCTCTGTGGTGCAAAGCTCCTCCTGAATGTCATCATGAGAAACGTGAACTACACAAATGCCACTTTGGAAATTGCCCACCCTGCAAACAGATTTGCAACAATATAAGACCTAATTGTCCTCATTTATGTCCCGCTCCTTGTCATGATGCAGTTATGGTAAAAGTTGAGCGGGTCAAGGCGAGTGCACCATGGGAGGAAGTAAAACctcaaaaggaaaaaaaatgtttacctTGTCCTGAATGTCTGGTACCTCTTCCTGTTGAATGCTTCGGAGGGCATGAAATTGTTGATTTTCCATGTTACCTTGCAAAGCCAGGAAGCTGTTTTCGACCTTGTGGAAGACAACTACAATGTAGAAATCATAATTGCACCCTTCCCTGCCATATTGTTGAAGATGGTAATGGATCTATGGCAGGCAGTAATTGTGAGCTGTGTGAGAATGAATGCACCAAAGAAAGACCTGTGGGATGTCAACATACATGCCCTAATCCTTGCCACCCTGGAGACTGCCCTCCTTGCAAACAGATGGTTAGAATAAAATGTCATTGCAGTTTGCTTCAACTGTATGTAGTCTGCAAAGATCTTCTGAATCCTGATAAACAGGAAGAAATTCAGAGTTGTGGAAATCAATGTCCTAAAAATTTGAAATGTGGGCATAGATGCAAAATCAACTGTCACCCAGGAGCCTGTCCAGAAGGTATTCCATGTAAGAAAAAGGTGAAGGTATTCTGCAAATGTAAAAGGTTGAAGAAAGATATAAACTGTGACTTAGTGAGAGCTGGAGAGGCTAAATTAGAATGCGATGAGCTCTGtgaagaattaaaaaaagaagctgagagaaaaaataaaattctgatggAAGAGAAGACTAAACAAGAAGAAATGAAGAATAAGgaagaaatggaaaaatatatgaAGAAATTCAACGGGAAGAAGAAGAATAGAGAAAGAAGAAATCATGCATATGACGATGAAGTtagtttcttgaagaaatattcaGTTCCTCTATCTGCCCTGGTGGTGATTATTATTTCTTTAGTTGCATTTACTCTTATAACTGGTTGA
- Protein Sequence
- MNNRKKQGNSNPWKKIPQKAPTVDKFEEARKKNQASVQKHIEEYESSSDEEEVETKTVIDQITASYTTKGGSCDKLQRTVSYLRDNLTSGATTCLICISKIKRDDQIWCCKSCYCIFHLVCIQRWSKDSISQKKHSISSQSLSGEQILWCCPKCRNNYKPENIPTEYRCFCSKKVNPTYQTLLVPHSCGELCGKELQPPCGHKCFLLCHPGPCPPCCATVNAKCYCGAKPPRLQRCSDKYWSCGGTCDKLLECRKHHCDDPCHGGVCKPCSKKIIQKCNCKSQAKLRDCSSPEWQCDKVCGKLFSCGIHKCMEICHAGVCNVCELSLPRTCPCGKTKFNLPCTEDTPTCPDTCDKLLECGEHHCVLKCHKGKCGTCLEIVKKQCRCGQHIKDVQCSKPFYCETKCKNLRDCNKHSCNKKCCNGECPPCEKPCGKTLKCGIHKCPSVCHRGPCFPCNLTDVVSCNCGETKISVPCGRKHHVKPPKCSLWCKAPPECHHEKRELHKCHFGNCPPCKQICNNIRPNCPHLCPAPCHDAVMVKVERVKASAPWEEVKPQKEKKCLPCPECLVPLPVECFGGHEIVDFPCYLAKPGSCFRPCGRQLQCRNHNCTLPCHIVEDGNGSMAGSNCELCENECTKERPVGCQHTCPNPCHPGDCPPCKQMVRIKCHCSLLQLYVVCKDLLNPDKQEEIQSCGNQCPKNLKCGHRCKINCHPGACPEGIPCKKKVKVFCKCKRLKKDINCDLVRAGEAKLECDELCEELKKEAERKNKILMEEKTKQEEMKNKEEMEKYMKKFNGKKKNRERRNHAYDDEVSFLKKYSVPLSALVVIIISLVAFTLITG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00765225;
- 90% Identity
- -
- 80% Identity
- -