Basic Information

Gene Symbol
Zmiz1
Assembly
GCA_030674115.1
Location
JARTUT010002180.1:1351629-1369710[+]

Transcription Factor Domain

TF Family
zf-MIZ
Domain
zf-MIZ domain
PFAM
PF02891
TF Group
Zinc-Coordinating Group
Description
This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1 1.1e+04 -2.3 0.8 5 24 490 509 487 513 0.85
2 2 6.6e-26 6.5e-22 78.5 4.5 1 50 570 619 570 619 0.98

Sequence Information

Coding Sequence
ATGGCCGTGTTAAGgctTGGCAACTATGGTATCAATGGTGGCATGAACAGTGCAGACGGTGGTTACAACAGCGGAAGTGCACTTTCAACTGCCGCAATGGTGGCAGCAGCAACTGCGACCGCCACTGCAACTGCCAGCGTGGTGGCATTCCAAGATAACAATCAATTCAGCAGTCAGCAATACCAACAAGGTTACCAGCAAAGGATGATGCAGATGGGTGGTATGAACAACATGAACGCCATGAACAACATGTCTTCAATGCCAATGGGCAATATGCAGCATAATATGATGGGCAATATGGTAACGAAGATGGGTATGCAGAGCCCTGGACCAGGTCCAACCACGAATTCAATGTACCCTCGGAGAATGACGCCCTATCCTACCCCAGCCATGATCAGTCAACAAAGGCAGCAACAGTGTTACCCCAAAAATGGCTGTTCACCAGCAATGAATCCTTCCTTCAGTCAGAATGGCCAATATTCAAATTACCCCACCAGACAACCAAGTTTCAATCAGTATCCCACCCAACAATCTTTAGGCCCTTCGAGCAACTACGGCCCTGGCGCCATGAGTATGGGCAGCATGGGTCCTGGATCTATGGGACCTGGTTCCATGAACCACAGCTCGATGGGACCTACTTCGATGGTCCCTAATACTATGGGCCCTAACTCTATGGGTCCTAACTCTATGGGTCCTAATTCTATGGTTCCTAACTCGATGGGGCCTAACTCAATGGGTCCTAATTCTATGGGTCCCAACTCCATGGGGCCTAGCAATATGAATCATGGCAGTATGGGACCTGGAAGCATGGGTAGCATGGGACCTGGCAGCATGGGTCCAGGAAGTATGGCCCCTGTTAGAAGTACAACCTTAAGGCAAACAACTCCTCCATATAGTAACCAGAGTCAATATTTCAATGGGTCTATGAATCAGTTCCCAACGAATAATTCTGGTCAATATATGAATGGCACCCCAACTGCACAATATGGTTCAACGAATCAATTCCAACAAGATGTATCCATGAGGAATAACATGAATTACCAGCATAGCCCTATTCCTGGTAACCCAACACCACCATTGACACCTGCGAGTAGCATGCCACCTTATATCAGTCCTAATCCAGATGTCAAACCGACTTTCAATGATCTGAAACCCCCGACCACCTCTCTAAAAGAAGACGAGTTGAGGTTAACTTTTCCCGTTAGGGACGGAATCATCCTCACGCCGTTTAGGCTTGAGCACAACCTAGCTGTAAGCAATCATGTTTTCCAATTAAAACCTACAGTACACCAAACGCTGATGTGGAGGTCTGATTTGGAGTTGCAATTGAAATGTTTCCACCATGAAGACAGACTCATGAACACCAATTGGCCCGCATCAGTACAAGTATCTGTCAATGCAACTCCACTGATGATAGATAGAGGAGAGCACAAAACGTCACATAAACCCCTCTATCTGAAAGATGTTTGCCAACCTGGGAGAAACACAGTACAAATCACAGTATCTGCCTGTTGTTGCTCGCATCTTTTTGTTCTACAATTGGTACACAGGCCAAGCGTGCGGTCAGTTTTGCAAGGTCTTCTTCGAAAAAGATTGCTCACCGCAGATCATTGTACGGCgaagatcaagaggaatttcAGCAATACAAGTTCTGGAGGTCCCAACGTTGATAGGGATAGAGACACGATAGAACAGACTGCCCTCAAAGTATCCCTCAAATGCCCCATTACCTTCAAAAGGATAACATTACCAGCCAGAGGCCATGAATGCAAACACATTCAATGTTTCGATTTGGAATCATACCTGCAACTAAATTGTGAAAGAGGCTCTTGGAGATGTCCCGTTTGCAACAAACCAGCTCAACTTGAAGGACTTGAGGTTGATCAGTATATGTGGGGCATATTGAACACCTTGAATAATTCTGAAGTTGACGAAGTTACAATTGATAGCTCTGCCAACTGGAAACCGGCTAAACCCCCTGGGATTAAAGTTGAAGATGATAACGACTCCTGTGGAGCCAAAAAACTAAGTAAAGCAATGTCTCCTGGTAGCATGACTATGCCTACCTCTAACAATTGGGACATGACTCAGGCCATGTCCCCTTATCTACCTCCGGACATGAATACAATTGCCAGTGGATCCATGATGAATGGACCACCATCGTACAACAATAGTAGAAATAATCAGTACGACTTCAATTCCACTCCAAATGGACCCACTAGTGATTTCTCGAACAGTGGTGGACCGCTGTCGCATCTTAGCGAATCTGTGAATTCTCTAGATCAGCTGAACGCCATGGAGAAGAGCTTGAGTGATCAGATGCCCCATACCCCTCATACCCCTCACACGCCACACACTCCACATACACCAGGAGGAACGCCAAGTGCTCACACACCAAGTGGTGGTACTGGACCTCCAAGTGTCCCACCATCCAATGAAATGCTGAACAACAGTACGAACTCAAATACAAGCACTAACGGAAATTCCAATGCTAACAATGAAACAAGCGTTGCAGATATTCCGTCTGATTTGAATTTCGATCCTGCAGCAGTCATCGATGGCGAGGGAACTGGACAGGAGGCCTTGAACTTGCTTCCTGAGAGTGTAGATCCTATGGAGATACTTTCTTACTTGGATCCTCCTGATTTAAACACACCGCCATCTAGTGGTAGCAGTTCCGGGCCTGCCAATACTTCTACAACAAGCGACGACATACTCGCATTGTTTGAATAA
Protein Sequence
MAVLRLGNYGINGGMNSADGGYNSGSALSTAAMVAAATATATATASVVAFQDNNQFSSQQYQQGYQQRMMQMGGMNNMNAMNNMSSMPMGNMQHNMMGNMVTKMGMQSPGPGPTTNSMYPRRMTPYPTPAMISQQRQQQCYPKNGCSPAMNPSFSQNGQYSNYPTRQPSFNQYPTQQSLGPSSNYGPGAMSMGSMGPGSMGPGSMNHSSMGPTSMVPNTMGPNSMGPNSMGPNSMVPNSMGPNSMGPNSMGPNSMGPSNMNHGSMGPGSMGSMGPGSMGPGSMAPVRSTTLRQTTPPYSNQSQYFNGSMNQFPTNNSGQYMNGTPTAQYGSTNQFQQDVSMRNNMNYQHSPIPGNPTPPLTPASSMPPYISPNPDVKPTFNDLKPPTTSLKEDELRLTFPVRDGIILTPFRLEHNLAVSNHVFQLKPTVHQTLMWRSDLELQLKCFHHEDRLMNTNWPASVQVSVNATPLMIDRGEHKTSHKPLYLKDVCQPGRNTVQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCTAKIKRNFSNTSSGGPNVDRDRDTIEQTALKVSLKCPITFKRITLPARGHECKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNNSEVDEVTIDSSANWKPAKPPGIKVEDDNDSCGAKKLSKAMSPGSMTMPTSNNWDMTQAMSPYLPPDMNTIASGSMMNGPPSYNNSRNNQYDFNSTPNGPTSDFSNSGGPLSHLSESVNSLDQLNAMEKSLSDQMPHTPHTPHTPHTPHTPGGTPSAHTPSGGTGPPSVPPSNEMLNNSTNSNTSTNGNSNANNETSVADIPSDLNFDPAAVIDGEGTGQEALNLLPESVDPMEILSYLDPPDLNTPPSSGSSSGPANTSTTSDDILALFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00349850;
90% Identity
iTF_00021020;
80% Identity
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