Basic Information

Insect: Micraspis discolor
Gene Symbol: -
Assembly: GCA_030674115.1
Location: JARTUT010002176.1:4334598-4342678[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.00014 0.029 16.2 1.2 1 23 142 165 142 165 0.97

2 24 2.8 5.6e+02 2.7 2.4 1 21 171 191 171 194 0.92

3 24 0.0034 0.69 11.9 0.6 3 23 208 228 207 228 0.97

4 24 0.00037 0.075 14.9 0.5 1 23 270 292 270 292 0.98

5 24 3.4 6.8e+02 2.4 1.2 1 21 298 318 298 321 0.70

6 24 0.0023 0.46 12.4 3.0 1 23 333 355 333 355 0.97

7 24 0.0079 1.6 10.7 2.8 1 23 398 420 398 420 0.98

8 24 7.8 1.6e+03 1.3 3.0 1 23 426 449 426 449 0.85

9 24 0.0021 0.42 12.6 0.7 1 23 464 486 464 486 0.98

10 24 1.1 2.2e+02 4.0 2.1 1 23 492 514 492 514 0.96

11 24 0.015 3 9.9 0.3 1 23 532 555 532 555 0.97

12 24 0.00062 0.12 14.2 2.9 1 23 561 584 561 584 0.98

13 24 2.9 5.7e+02 2.7 1.0 1 23 594 617 594 617 0.93

14 24 1.9 3.8e+02 3.2 2.7 1 23 634 656 634 656 0.97

15 24 0.062 12 7.9 1.9 2 23 663 684 662 684 0.97

16 24 0.12 24 7.0 1.5 1 23 707 730 707 730 0.95

17 24 0.0027 0.54 12.2 7.1 1 23 736 759 736 759 0.97

18 24 1.1 2.1e+02 4.0 3.1 1 23 770 793 770 793 0.97

19 24 0.054 11 8.1 4.8 1 23 807 829 807 829 0.98

20 24 0.018 3.5 9.6 0.7 1 23 835 857 835 857 0.98

21 24 2.4 4.7e+02 2.9 2.0 2 23 865 887 864 887 0.94

22 24 4.8 9.6e+02 2.0 0.7 1 21 893 915 893 919 0.90

23 24 0.0013 0.26 13.2 0.3 1 23 946 969 946 969 0.94

24 24 0.038 7.6 8.6 1.0 2 23 975 997 974 997 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.00014	0.029	16.2	1.2	1	23	142	165	142	165	0.97
2	24	2.8	5.6e+02	2.7	2.4	1	21	171	191	171	194	0.92
3	24	0.0034	0.69	11.9	0.6	3	23	208	228	207	228	0.97
4	24	0.00037	0.075	14.9	0.5	1	23	270	292	270	292	0.98
5	24	3.4	6.8e+02	2.4	1.2	1	21	298	318	298	321	0.70
6	24	0.0023	0.46	12.4	3.0	1	23	333	355	333	355	0.97
7	24	0.0079	1.6	10.7	2.8	1	23	398	420	398	420	0.98
8	24	7.8	1.6e+03	1.3	3.0	1	23	426	449	426	449	0.85
9	24	0.0021	0.42	12.6	0.7	1	23	464	486	464	486	0.98
10	24	1.1	2.2e+02	4.0	2.1	1	23	492	514	492	514	0.96
11	24	0.015	3	9.9	0.3	1	23	532	555	532	555	0.97
12	24	0.00062	0.12	14.2	2.9	1	23	561	584	561	584	0.98
13	24	2.9	5.7e+02	2.7	1.0	1	23	594	617	594	617	0.93
14	24	1.9	3.8e+02	3.2	2.7	1	23	634	656	634	656	0.97
15	24	0.062	12	7.9	1.9	2	23	663	684	662	684	0.97
16	24	0.12	24	7.0	1.5	1	23	707	730	707	730	0.95
17	24	0.0027	0.54	12.2	7.1	1	23	736	759	736	759	0.97
18	24	1.1	2.1e+02	4.0	3.1	1	23	770	793	770	793	0.97
19	24	0.054	11	8.1	4.8	1	23	807	829	807	829	0.98
20	24	0.018	3.5	9.6	0.7	1	23	835	857	835	857	0.98
21	24	2.4	4.7e+02	2.9	2.0	2	23	865	887	864	887	0.94
22	24	4.8	9.6e+02	2.0	0.7	1	21	893	915	893	919	0.90
23	24	0.0013	0.26	13.2	0.3	1	23	946	969	946	969	0.94
24	24	0.038	7.6	8.6	1.0	2	23	975	997	974	997	0.95

Sequence Information

Coding Sequence: atggATGCTGGGACGGGTGGTTGCTGGGAAAATGAAGATGGATCTATTTCGATTGTTAAAACCGAAATTGAAGAATGTGAACCAGCCTATCAGGATGCAGGAGAAAACGAAGATCATGGAAATTTTAATGATCCTTACGCAGAAGACGGTACACACTTTGGGGAGTGTTTCATGCCCAAGCAGGAAAACTATGAGAATTTCGTTCCAAAACAAGAGTTTAATGAAAATGAAGAACATTTTGGTGCAGGTCAGGGAGAAAATTATTATGTTAATAGTTTTCAAGAAACGTCTTCAAGTATGGGAGAAATTGACAACTGGCCTCTTCTTCAGGGattcaccACGCCCGAGGCCGATCAACATTTCATGAATCAACCAGGTACATCTGACATAAACGAATTTGCAGATAAACGTGAGGCCATGTTGTATCCTTGCAAGTATTGCGACTATGTAGGTAGTCATCCGAAATTACTCAATTCGCATATGAACAATCGTCATATAAAAGCCGTTGTCTACCAATGCCCTCATTGTGCTTACAATTCAACACTTCCTCGGTCCGTTCGGGAACATATACAATGTAAACATGTTAATGAAAGCGACGATAAGCTAATTGTGAAGAGAAGTTGCCAATTTTGCGAATATAGCGCCAGTAGTGCTACAGCTTTGAAGAATCACATGAATAAGCATACGAAAGAAGTGAAACACCAATGTAACTTCTGCGAATTTAACACCTTATGGGAAGGGTATTTAAAAATGCATATAAGAAGGAAACACAGCGATCAATCTACGGAATTCGGAAACGCTAAAGAGTATCCGTGTCAGTATTGTGATTATAAGGCAGCTACTCCGAGCACTCTTAAGCTCCATACCAACAAACATACAAGAGAACAAGAACATCAATGTCCTTATTGTCCATACAAGACTGTATGGACTACCTACATAAAACTGCACATTCAGAATAAACATTTCAAAGGAGATAAAACTCCACCCAGCAAAGAACACCCTTGTAGTTTCTGCGATTACAAAGCTAAGAATTCTACATTGTTGAGACAGCACATGAATAAACACACACGCGAAAAAGTACATCAATGCCCACACTGCCCGTTTAACACTCTCTGGGTCACCTACATGAAGCTCCACATTAAAAGGAAACACACAGAAAACAATGAGAATGACGTCGctgaaaaaaaagattttcaatGCCAATATTGTACCTACAAAGCTATCAGTTTGAGCCACTTGAAAATCCACGAAAACAAACACACCAAGGCGATCGAATATAAATGCAACCAATGCGACTTCAAGACTACGTGGTATGGATACTTGAAATTCCACATAAAAAGGAAACACTCGAGCGGTGTTAAGGAAGAggatgaaaaaacaaaaatgactTTCCCTTGCAAGTTCTGTCCGTATAAAGCCATCAATCTGAGCACCCTAAAAGTTCACCAGAACAAACATACTAGAGAAAACATCTACAATTGCCCTCACTGTGAGTTCAAAACAACATGGAGGGCATACATAAAGAGTCACATTCAAAGACATAACGCCAACAATTTTAAAACTCGTAAACAAGGGGATGGATCCGTCAAATCCTACCCTTGTCAGTATTGCAGCTACGTAGCCACCCAGATGGGTTCATTGAAATTACACGTTAATTCAAAACATACACGAGAGAATATGCACAAGTGTCCAGAGTGTGATTATCAATGTGCCGTCTATGGCAATTTAAGGATGCATATCAGACGTAAACACGGGTTAAAACCAGATGAAAACGGTATATACCATTGTAAGGAATGCGAATTTAATTCAGAGAGTGCCATTGAAATCAAATCTCATCTCCAGGAAAAACACGATTTGAAAATAGAAGTTGATGACGTCAAAAAAGAGGATGAGAAAGTTTACTCGTGTCAATATTGTTCTTATACAACCCTATACCAGCAAGTGATGAAGAAACATATAAACAAGCATACTAGACAGAATGTTATCCAATGTCCGCACTGCCCTTATTCAACGGTATGGAATCATTACATGAAAGTTCATATTAAAAGACATAACGAACCTAAAACATTAACCGGAAGGCAAAGATTAACCAAACCTAACACTGATCAAAGTAGACTGTTTCCTTGTCAATACTGTGATCATAGAAGTTTATCCTTCAGTAGTCTAAGGGATCACATAAACTCTGTGCACACCCGCGCTGTCATACACAAATGTCCTTATTGCGATCATAAATGTACTCTGAAAGGTAATTTGAAAGGTCATATTAGAAGAAAGCATCCAGCTGAATTTGTTGAGCAAGAAAAGAGGTATCAATGTGAGCATTGCGAGTTTAAAACATCTGAGAGACGAATAATGAAGATCCATATGAAGAAAGAACATAATATAGATGAAGCGAAGGAAAGAGCTGAAAATGGGGAATATCAGTGCCAGTTTTGTGATTATAAGGCAAAAAGTCTATACACTTTGAAGATACATCGTCATAAGCACACCAAAGAGAATGCTTATCGTTGCCCACAGTGTGAATTTGCTACCAAATGGCCAAATTATCTTCGAAAGCATATAAAACAACATAGCATCGGAAAAAGCAGGGTGTCTTGCTTATATTGCGAGTACAAAGGGTGTTCTACTTTCAGACTCAGAAAACATATAGAAAGCTTGCATAAGATTGAAGAATACTATCCTTGTCCAAAACCCAACTGTCTATTTAGAACTATACACTACACCAGTTTGAGAATGCATTTAAAGGGCAGTATTCATGCTGTAGGCGTACGGAGAGGTCCTATGTCAGTCAGTCGTAATTTTTCTTATAAATATAGACCAAATGAAGGTAGATACTTCGCTTGCGATTATTGTGAGTACGCATCGAAAACTCAAGGAAATCTGGATAAACATATAGAGAACAAACATGAAAAGAAAGGTATGAAATGTGGATTATGCAGCTATCGAACACCTTCCAAAAATTACCTTGCTAGACATTATAAACTAAGACATTACGTTGAAAAGAAGGAGGATAATGATGTAATAACTAAAGTAGAAGAAGCGGATACGACAAACCCTGAAGAAGTTCTTGAAAATATCCAAGCAGAAGAATCAGAAATTGTTAAAGCTGAAGAACTTCCTGAAATATCTCCAGCATTACCTGATTATCACGATCCTGATATTTCTGAACCCTTAGAAATATCTTCAGAGTTAGAACCAAATGAGGAAGCTCCGAATGCAAACGAAGAATCTGATGCAACGCCAGGCTTGCGTTCTAGAAGAAAGAGAAGCTTTGTTCCATATTATGTAGAAGATAGTGACGAGGAAGAAAGTGAATTCATGTGTGAAGATTTCCTTGAAGTGCAGCTTGGCGCCAATACTGGTCCCGCGGATAAACAGAACGAATCTGAATCGAACAAAGAACATGAAGCTGAGCCACATGTATTTATCGAGCCTAAGATCGAGATAACAGAACTAGAACCAAGCGAAGAATTGAGCTCAACAATTGCTGACTCGAGTGTACATGAATCGAATCCAATTCCCAGCGTTGAAAATAAGAGTCAAGCTGATGATGAAACAATAATTCCGAATCAAATCATAACTCGTAGATACAGTACAAGAAGAAATGTACCTGTACAACCAAAAATGATCAACCCAGTAAATGGCGTCTCAGGAAAGAATAAAATTAGTAATACAAACAAAACGATCAAGATTGCAAAGAAAGTCGGGGACAAAATGATGAATGGAAAACGAAAAATCGTGGTCAAAAAAGTTGTCGCCAAAAAATTTAACACCGGCAACAAAAACTCTAATTCCAATAAAATACATCCTGAAATCAGTAAAGAAACTGCTGAATGTCCCCTAGAATCTGCCGATGGTGCCCAAGAAACTGTCGATGGTCCTCAAGAATCTGTTGACGTTCCACAAGAATCTGCCAAAGCTCCCCAAGAATCTGTTGAGGGTCCTCAAGAACCTATTCACGCAGCTGCAAACAGTTCCTCAGAAACTCCCGATATTATGAAAAACGAATCTCTCACGAACATagaagaaaattcaaaatctgcggagaaagaaagaaaatacatttcaaaCAATGAAACAAAAGAGAAAATAGAATCTGAAAATTCGCAAACCAATTTTGATAATAGTATTCCAAGTGAGTCTTGTATTGATGTAAATAATAAGTCGTCAGGGAGTATTTCAAAATCGCCGGATAAAATTCAATCTGAAGAAGGAAGATCAGTTTCTTCAAATATTACCACTCCTAAAGAAGGCGAAGCTGATAAGGAAAAAGTGAAATGA
Protein Sequence: MDAGTGGCWENEDGSISIVKTEIEECEPAYQDAGENEDHGNFNDPYAEDGTHFGECFMPKQENYENFVPKQEFNENEEHFGAGQGENYYVNSFQETSSSMGEIDNWPLLQGFTTPEADQHFMNQPGTSDINEFADKREAMLYPCKYCDYVGSHPKLLNSHMNNRHIKAVVYQCPHCAYNSTLPRSVREHIQCKHVNESDDKLIVKRSCQFCEYSASSATALKNHMNKHTKEVKHQCNFCEFNTLWEGYLKMHIRRKHSDQSTEFGNAKEYPCQYCDYKAATPSTLKLHTNKHTREQEHQCPYCPYKTVWTTYIKLHIQNKHFKGDKTPPSKEHPCSFCDYKAKNSTLLRQHMNKHTREKVHQCPHCPFNTLWVTYMKLHIKRKHTENNENDVAEKKDFQCQYCTYKAISLSHLKIHENKHTKAIEYKCNQCDFKTTWYGYLKFHIKRKHSSGVKEEDEKTKMTFPCKFCPYKAINLSTLKVHQNKHTRENIYNCPHCEFKTTWRAYIKSHIQRHNANNFKTRKQGDGSVKSYPCQYCSYVATQMGSLKLHVNSKHTRENMHKCPECDYQCAVYGNLRMHIRRKHGLKPDENGIYHCKECEFNSESAIEIKSHLQEKHDLKIEVDDVKKEDEKVYSCQYCSYTTLYQQVMKKHINKHTRQNVIQCPHCPYSTVWNHYMKVHIKRHNEPKTLTGRQRLTKPNTDQSRLFPCQYCDHRSLSFSSLRDHINSVHTRAVIHKCPYCDHKCTLKGNLKGHIRRKHPAEFVEQEKRYQCEHCEFKTSERRIMKIHMKKEHNIDEAKERAENGEYQCQFCDYKAKSLYTLKIHRHKHTKENAYRCPQCEFATKWPNYLRKHIKQHSIGKSRVSCLYCEYKGCSTFRLRKHIESLHKIEEYYPCPKPNCLFRTIHYTSLRMHLKGSIHAVGVRRGPMSVSRNFSYKYRPNEGRYFACDYCEYASKTQGNLDKHIENKHEKKGMKCGLCSYRTPSKNYLARHYKLRHYVEKKEDNDVITKVEEADTTNPEEVLENIQAEESEIVKAEELPEISPALPDYHDPDISEPLEISSELEPNEEAPNANEESDATPGLRSRRKRSFVPYYVEDSDEEESEFMCEDFLEVQLGANTGPADKQNESESNKEHEAEPHVFIEPKIEITELEPSEELSSTIADSSVHESNPIPSVENKSQADDETIIPNQIITRRYSTRRNVPVQPKMINPVNGVSGKNKISNTNKTIKIAKKVGDKMMNGKRKIVVKKVVAKKFNTGNKNSNSNKIHPEISKETAECPLESADGAQETVDGPQESVDVPQESAKAPQESVEGPQEPIHAAANSSSETPDIMKNESLTNIEENSKSAEKERKYISNNETKEKIESENSQTNFDNSIPSESCIDVNNKSSGSISKSPDKIQSEEGRSVSSNITTPKEGEADKEKVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -