Mdis037332.1
Basic Information
- Insect
- Micraspis discolor
- Gene Symbol
- Hivep1
- Assembly
- GCA_030674115.1
- Location
- JARTUT010002175.1:8149801-8166013[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.65 1.3e+02 4.7 3.9 2 23 86 107 85 108 0.94 2 21 0.28 56 5.9 7.6 1 23 113 135 113 135 0.98 3 21 0.014 2.8 10.0 0.1 1 23 141 163 141 163 0.97 4 21 3.9e-05 0.0077 18.0 0.1 2 23 168 189 167 189 0.97 5 21 0.022 4.3 9.3 0.9 1 23 195 217 195 217 0.98 6 21 0.064 13 7.9 0.4 2 23 226 247 225 247 0.92 7 21 2.6e-05 0.0052 18.5 5.4 1 23 271 293 271 293 0.98 8 21 1.5e-05 0.003 19.3 1.4 1 23 299 321 299 321 0.95 9 21 0.017 3.3 9.7 5.2 1 23 327 350 327 350 0.95 10 21 0.00041 0.083 14.8 3.3 1 23 360 383 360 383 0.98 11 21 4e-06 0.0008 21.1 0.4 1 23 456 478 456 478 0.99 12 21 0.063 13 7.9 2.8 5 23 487 505 484 505 0.95 13 21 0.00023 0.046 15.6 0.6 2 22 509 529 508 529 0.95 14 21 0.038 7.6 8.6 0.4 3 20 824 841 822 843 0.92 15 21 0.93 1.9e+02 4.2 2.4 2 21 885 904 884 906 0.84 16 21 1e-06 0.0002 23.0 2.4 1 23 914 936 914 936 0.98 17 21 3.8e-06 0.00076 21.2 2.3 1 23 942 964 942 964 0.99 18 21 0.0065 1.3 11.0 2.1 1 23 972 994 972 994 0.98 19 21 0.15 29 6.7 8.0 1 23 1000 1023 1000 1023 0.96 20 21 0.00093 0.19 13.6 1.4 2 23 1167 1188 1166 1188 0.97 21 21 0.2 41 6.3 0.0 1 21 1194 1214 1194 1215 0.94
Sequence Information
- Coding Sequence
- ATGAAAACTATGAACCCTTGCATTGTGCTATATACAGGTCAATCTATTtttattcctaataaaattcCTATTCCTGGCTACTTTGGAGTAGATGAAAGTGgtaatcaattaaaaatttctcCACATGCTGACTTCTTCTTAATAAGTGATACACAAGTAAAGGATCTTGGTAATAATCAATCCTTAGTAACGGACTTATCTCATTTGAATGGTGCTTCCAGAGAGACTAATTTTCAACTAAATGAGGCCTTGATACATTGttcaaattgtaataataatttcgagGATATCAATCAATATAAAGAACATGAGAAAACTCATCACAGCAAAAAACTATTTGAATGCAATAGCTGCcatgaaaaatttaataaaatgtgTTTATATAGAAAGCATCTATCAACCCATAAAGAATCAAAGCTTTTTGAATGTGTGATCTGTGAAACTGgatttaatattgaaaataattataaagtACATATGGCTCTGCATGGAAACTCATTGGTTTGCCCTATATGTAATTTACCTTTTCAAAGAAAGGCTAGTTTGAAGTCACACTTAGCCACTCAtcaagttgaagaaattcaCACTTGTAGAGAGTGTGCATCAGAATTTAATAACTTGgtGGATTTAAGTATACATCTCAAAACTCATACAATAGATTCCGAGCAGAAATTAATATGTAGATTTTGTAAAGTGAGGTTTGACACTTTGAGGGATTTAAAAAGTCATGTTGCAGATCATATGAAGgtGAAAAAAGTTATATTGAATGTTACAAAACCAAAAAAAGAAGTGGCTATCAAAAAACTTAAACATAAATGTAATGTATGTGAAAAAGCATTTTCAAAGTACTGTTTACTTACAAGACATATGAGAATTCATAATGGAGAACGACCGTTTCTGTGTTCAATTTGTTTTAAAAGCTTCACACAGAAAGTATCTCTCAATATCCATTTAATGAAACATACTGGAATAAAACCATTTTGCTGTACATTATGCCCAGCAAAATTTTATCAGAAATGTAATCTCAAGGTTCATGTTGAGAAAACTCATACTGCCACTGCAGaaggagaaaaaaatttcaagtgtACCGAATGTGACTGTATATTTAAGAAACTAGCTTCATTGAATACCCatgttaaaaaaaatcattcagacCGAGATTTAGTTAATGTTATGTCAGTTATtgatcaactgaaaaatttagagAAACAACTGGACGGAAAGTCTGTTGAGCAAGAGAAAAAAGGAAAAACTAAGCATTCAGTGGAATCTATGAAGGAACAACACAAAGAAAATGCAGAAGATATAAGTGATAACTATCAAGTCCATACCCTAAGGCAAAAAGTTGATGGAGTGAATAAAGTTTATGTTTGTTCTTATTGTTCAAAGGAAGCCAAAAAGCCTTCAGATTTAATTCGTCATATCAGGACACATACCAAAGAAAAGCCTTTCAAGTGCCACTGTGGAGACTCATTTGCACTCAAGACCACTCTCCAATCACATATGAGAAGTCACATAGAGAAAAAATGTGAAATATGTTCGAAAGTTTTCATTTCAACCAAACAATTCAGAGCCCACTTAAGgatgagatcatgggaCAGCGTATCGAATGCCTTTGATAGGTGCAACATCAACCCAACTGTCACATTTGAATCTAAGAATGCgtctaagattcctgagataaactcaaagattgctgtctgtgTGGACTTTCCTGTGACATATCCATGTTGTAAAGGTGATAacattttttcttgtactaggtatGATACAAGCTGTGTTGAAATAGTTAGTTGGAGAATATTGGAAAGTGAACAAAATGAGCCGGATACTGTTGGACCAGAGGAAAGTAGTTCTTTCTTGAACCAAATACTGCAAACACCTGCAAATATTATTCATTACAACAATGATCCTCTCACTCTTCAGAACGACAATATAGATCTTCTTAAAAAATCTCTTCCACTTGTGGAGACAGAGTCGAACGAGGATATGCAAACATTTCTAGTCGATTATCCAGAAGTTCAAAATGGAGATTACCTGACTAATTATTTCGTATCTCAATCTGATAACAAAATAATACTCAATACAATAGATGTAAATAATGACCAATCTCCACTGATCTTCAATGTTGAGAATATCGTTACCAAAAATGATAATGTGATAAATAAAAACGATTCGAGCCTAATTTCCAATGGAAAATCATCAGACGCAGGTCTCTGTAGAACTGTCGATGTATCCCAAATAATACCAAGTCATGGAAGCAGTTCTACCTTTGAATCTGTTGATAATGGTTCCGAGCATGATGTGAGCAATCGTTACCTATCTGACAGCCTTTATTTGTATCCCACTACTGAAACGATCATGGATACCGGACAAGAAACATGTCCTGCAAATGATGATATCAGTGCAGACCGTAATCAGGATCTTACTAACGAAACTCAAGAAAATGACGGCTTGAGTGTGATCCATTGtttaaattgtaaaaaaatgtttaaaaactCAGTACCATATTTAGCACATATGGACTCGTGTAACAAATCATCTCCTGAATCTTCTTGTGAAAAATCACAAgagaaagtgaaacaaaattgtgATAAAGAAGAACTTGGTTCTGCAAAGAGTAATATAAAtccaaaaatgaagaaaaacttgATCTGTGTTCATTGTAAGAAGGAATTCAGTAATAGAGGCATTTATATGCTTCACATTAAATGTCACCATAAGAAAGGAAATGGCTTACATAAATGTGACTATTGTGATAGGGAATTCAAAAAACCTTCAGATCTTGGTCGACATCTGAGAACGCATACAGGCGAAAGACCTTTTCAGTGTGACAAGTGTGACAAGAAGTTTTCATTGAAGTCCACTCTAGAAGGCCACTATAGAACCCACAACCCAACTGCGAATAAATCGTTCGTATGTGAAGTCTGTAATTCGTTTTTTTCTTCTAAGGCTAGCAGAAAGTTACATATGCATGTCCATACAGggtTACAACCTCACAAATGCAGTTTTTGCGATCAACACTTCAGAACTGCTGCTCATAAAAAATCCCACGAGAAGAAAATTCATCTTACCAATAAGAAAAAGAGAGACCATAGTAATTCTAAAAGAATCACGAATATTCTAGCAACTGCTGTGGATATGGCTGTGGGTGAAATTCAGAATGAAAAAAGACTCTCAGAGCAGGAATGTCCAGATCCTCCAGAAATACAGgtGGATTTAGCAGATCCAAAATTTGCAACTGACGCCATCACAATTGATCCTGCATTATTATTAATCCGAACGTCAAATGTTTTTCTAGAAGGCATGGATCAAGAACTAATGCCAGGTTCAGTAACTGTAGATGATTTGGTGCCTTCGAAAGCTTCCGATATGATTAGTAGTGATGATTGCGTCAAAGATAATATGTTCACCAAATCCCTTATTATGGATAACTATTTTTCTATAATTAATCAAGATTCACTTGCAACAAAGGAATCAACTCAGTTTGTCATGAAGAAATGTTCACAGTGCACTAAATATTTTGCGTCGAATGAGGATCTGTTGCAACACGAAAAATCTCATAGCTTAGGCATGTCCTATTCATGCTTTATATGTGATTTGATGTTAGATGATGCTGAAGAATTAGGGAACCACTTACAAAGGTGA
- Protein Sequence
- MKTMNPCIVLYTGQSIFIPNKIPIPGYFGVDESGNQLKISPHADFFLISDTQVKDLGNNQSLVTDLSHLNGASRETNFQLNEALIHCSNCNNNFEDINQYKEHEKTHHSKKLFECNSCHEKFNKMCLYRKHLSTHKESKLFECVICETGFNIENNYKVHMALHGNSLVCPICNLPFQRKASLKSHLATHQVEEIHTCRECASEFNNLVDLSIHLKTHTIDSEQKLICRFCKVRFDTLRDLKSHVADHMKVKKVILNVTKPKKEVAIKKLKHKCNVCEKAFSKYCLLTRHMRIHNGERPFLCSICFKSFTQKVSLNIHLMKHTGIKPFCCTLCPAKFYQKCNLKVHVEKTHTATAEGEKNFKCTECDCIFKKLASLNTHVKKNHSDRDLVNVMSVIDQLKNLEKQLDGKSVEQEKKGKTKHSVESMKEQHKENAEDISDNYQVHTLRQKVDGVNKVYVCSYCSKEAKKPSDLIRHIRTHTKEKPFKCHCGDSFALKTTLQSHMRSHIEKKCEICSKVFISTKQFRAHLRMRSWDSVSNAFDRCNINPTVTFESKNASKIPEINSKIAVCVDFPVTYPCCKGDNIFSCTRYDTSCVEIVSWRILESEQNEPDTVGPEESSSFLNQILQTPANIIHYNNDPLTLQNDNIDLLKKSLPLVETESNEDMQTFLVDYPEVQNGDYLTNYFVSQSDNKIILNTIDVNNDQSPLIFNVENIVTKNDNVINKNDSSLISNGKSSDAGLCRTVDVSQIIPSHGSSSTFESVDNGSEHDVSNRYLSDSLYLYPTTETIMDTGQETCPANDDISADRNQDLTNETQENDGLSVIHCLNCKKMFKNSVPYLAHMDSCNKSSPESSCEKSQEKVKQNCDKEELGSAKSNINPKMKKNLICVHCKKEFSNRGIYMLHIKCHHKKGNGLHKCDYCDREFKKPSDLGRHLRTHTGERPFQCDKCDKKFSLKSTLEGHYRTHNPTANKSFVCEVCNSFFSSKASRKLHMHVHTGLQPHKCSFCDQHFRTAAHKKSHEKKIHLTNKKKRDHSNSKRITNILATAVDMAVGEIQNEKRLSEQECPDPPEIQVDLADPKFATDAITIDPALLLIRTSNVFLEGMDQELMPGSVTVDDLVPSKASDMISSDDCVKDNMFTKSLIMDNYFSIINQDSLATKESTQFVMKKCSQCTKYFASNEDLLQHEKSHSLGMSYSCFICDLMLDDAEELGNHLQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -